RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
PFDN5-220ENST00000628881 KLRG2A4D1S0 409 aaPredicted RBP17.51■□□□□ 0.39
PFDN5-220ENST00000628881 FLIIQ13045 1269 aa17.51■□□□□ 0.39
PFDN5-220ENST00000628881 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
PFDN5-220ENST00000628881 DALRD3Q5D0E6 543 aaKnown RBP17.51■□□□□ 0.39
PFDN5-220ENST00000628881 TNRC6CQ9HCJ0 1690 aaKnown RBP17.51■□□□□ 0.39
PFDN5-220ENST00000628881 ATP5J2-PTCD1G3V325 749 aa17.5■□□□□ 0.39
PFDN5-220ENST00000628881 TRIM28Q13263 835 aaKnown RBP17.5■□□□□ 0.39
PFDN5-220ENST00000628881 KSR2Q6VAB6 950 aa17.5■□□□□ 0.39
PFDN5-220ENST00000628881 MAP3K2Q9Y2U5 619 aa17.5■□□□□ 0.39
PFDN5-220ENST00000628881 ADCY9O60503 1353 aa17.5■□□□□ 0.39
PFDN5-220ENST00000628881 PI4KAP2A4QPH2 592 aa17.49■□□□□ 0.39
PFDN5-220ENST00000628881 SRGNP10124 158 aa17.49■□□□□ 0.39
PFDN5-220ENST00000628881 TTLL6Q8N841 843 aa17.49■□□□□ 0.39
PFDN5-220ENST00000628881 PI4KAP1Q8N8J0 262 aa17.49■□□□□ 0.39
PFDN5-220ENST00000628881 MASTLQ96GX5 879 aa17.49■□□□□ 0.39
PFDN5-220ENST00000628881 MYD88Q99836 296 aa17.49■□□□□ 0.39
PFDN5-220ENST00000628881 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
PFDN5-220ENST00000628881 CHD4Q14839 1912 aa17.49■□□□□ 0.39
PFDN5-220ENST00000628881 STYK1Q6J9G0 422 aa17.48■□□□□ 0.39
PFDN5-220ENST00000628881 ZNF622Q969S3 477 aaKnown RBP eCLIP17.48■□□□□ 0.39
PFDN5-220ENST00000628881 ZNF428Q96B54 188 aa17.48■□□□□ 0.39
PFDN5-220ENST00000628881 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
PFDN5-220ENST00000628881 SH3TC1Q8TE82 1336 aa17.47■□□□□ 0.39
PFDN5-220ENST00000628881 CT47B1P0C2W7 299 aaPredicted RBP17.47■□□□□ 0.39
PFDN5-220ENST00000628881 NPR1P16066 1061 aa17.47■□□□□ 0.39
PFDN5-220ENST00000628881 FKBP5Q13451 457 aaPredicted RBP17.47■□□□□ 0.39
PFDN5-220ENST00000628881 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
PFDN5-220ENST00000628881 CRY2Q49AN0 593 aa17.46■□□□□ 0.39
PFDN5-220ENST00000628881 CCDC191Q8NCU4 936 aa17.46■□□□□ 0.39
PFDN5-220ENST00000628881 CNKSR1Q969H4 720 aa17.46■□□□□ 0.39
PFDN5-220ENST00000628881 ZBED9Q6R2W3 1325 aa17.46■□□□□ 0.38
PFDN5-220ENST00000628881 NEXNQ0ZGT2 675 aa17.45■□□□□ 0.38
PFDN5-220ENST00000628881 CWC25Q9NXE8 425 aaPredicted RBP17.45■□□□□ 0.38
PFDN5-220ENST00000628881 CACNA1SQ13698 1873 aa17.45■□□□□ 0.38
PFDN5-220ENST00000628881 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
PFDN5-220ENST00000628881 LAMB2P55268 1798 aa17.44■□□□□ 0.38
PFDN5-220ENST00000628881 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
PFDN5-220ENST00000628881 SYNE4Q8N205 404 aa17.44■□□□□ 0.38
PFDN5-220ENST00000628881 MRPL50Q8N5N7 158 aaKnown RBP17.44■□□□□ 0.38
PFDN5-220ENST00000628881 DNAAF4Q8WXU2 420 aa17.44■□□□□ 0.38
PFDN5-220ENST00000628881 NLRP3Q96P20 1036 aa17.44■□□□□ 0.38
PFDN5-220ENST00000628881 SLX4Q8IY92 1834 aa17.43■□□□□ 0.38
PFDN5-220ENST00000628881 IGKV5-2P06315 115 aa17.43■□□□□ 0.38
PFDN5-220ENST00000628881 HCLS1P14317 486 aaPredicted RBP17.43■□□□□ 0.38
PFDN5-220ENST00000628881 PRPF40BQ6NWY9 871 aaKnown RBP17.43■□□□□ 0.38
PFDN5-220ENST00000628881 C3orf67Q6ZVT6 689 aa17.43■□□□□ 0.38
PFDN5-220ENST00000628881 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
PFDN5-220ENST00000628881 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
PFDN5-220ENST00000628881 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
PFDN5-220ENST00000628881 FAM89AQ96GI7 184 aa17.43■□□□□ 0.38
PFDN5-220ENST00000628881 ALDH1B1P30837 517 aa17.42■□□□□ 0.38
PFDN5-220ENST00000628881 HOXA10P31260 410 aaPredicted RBP17.42■□□□□ 0.38
PFDN5-220ENST00000628881 ARHGAP27Q6ZUM4 889 aa17.42■□□□□ 0.38
PFDN5-220ENST00000628881 NEURL1BA8MQ27 555 aa17.41■□□□□ 0.38
PFDN5-220ENST00000628881 PCCAP05165 728 aaPredicted RBP17.41■□□□□ 0.38
PFDN5-220ENST00000628881 YY1P25490 414 aa17.41■□□□□ 0.38
PFDN5-220ENST00000628881 CWF19L2Q2TBE0 894 aaKnown RBP17.41■□□□□ 0.38
PFDN5-220ENST00000628881 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
PFDN5-220ENST00000628881 F6X3S4 739 aa17.4■□□□□ 0.38
PFDN5-220ENST00000628881 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
PFDN5-220ENST00000628881 HSP90B1P14625 803 aaKnown RBP17.4■□□□□ 0.38
PFDN5-220ENST00000628881 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
PFDN5-220ENST00000628881 LINS1Q8NG48 757 aa17.4■□□□□ 0.38
PFDN5-220ENST00000628881 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
PFDN5-220ENST00000628881 SMC4Q9NTJ3 1288 aa17.4■□□□□ 0.38
PFDN5-220ENST00000628881 PTPRCP08575 1304 aa17.4■□□□□ 0.38
PFDN5-220ENST00000628881 C21orf2O43822 256 aa17.39■□□□□ 0.37
PFDN5-220ENST00000628881 SOGA3Q5TF21 947 aa17.39■□□□□ 0.37
PFDN5-220ENST00000628881 CRAMP1Q96RY5 1269 aa17.39■□□□□ 0.37
PFDN5-220ENST00000628881 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
PFDN5-220ENST00000628881 BEND3Q5T5X7 828 aa17.38■□□□□ 0.37
PFDN5-220ENST00000628881 C7orf43Q8WVR3 580 aa17.38■□□□□ 0.37
PFDN5-220ENST00000628881 CDHR2Q9BYE9 1310 aa17.38■□□□□ 0.37
PFDN5-220ENST00000628881 FER1L6Q2WGJ9 1857 aa17.37■□□□□ 0.37
PFDN5-220ENST00000628881 RARSP54136 660 aaKnown RBP17.37■□□□□ 0.37
PFDN5-220ENST00000628881 GCKRQ14397 625 aa17.37■□□□□ 0.37
PFDN5-220ENST00000628881 SF3B3Q15393 1217 aaKnown RBP17.37■□□□□ 0.37
PFDN5-220ENST00000628881 ABCC4O15439 1325 aa17.37■□□□□ 0.37
PFDN5-220ENST00000628881 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
PFDN5-220ENST00000628881 CCDC93Q567U6 631 aa17.36■□□□□ 0.37
PFDN5-220ENST00000628881 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
PFDN5-220ENST00000628881 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
PFDN5-220ENST00000628881 H7C1W4 665 aa17.35■□□□□ 0.37
PFDN5-220ENST00000628881 NFKBIEO00221 500 aa17.35■□□□□ 0.37
PFDN5-220ENST00000628881 PPEF1O14829 653 aaPredicted RBP17.35■□□□□ 0.37
PFDN5-220ENST00000628881 PDE8AO60658 829 aa17.35■□□□□ 0.37
PFDN5-220ENST00000628881 RASSF7Q02833 373 aa17.35■□□□□ 0.37
PFDN5-220ENST00000628881 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
PFDN5-220ENST00000628881 SBF1O95248 1867 aa17.35■□□□□ 0.37
PFDN5-220ENST00000628881 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
PFDN5-220ENST00000628881 GRAPQ13588 217 aa17.34■□□□□ 0.37
PFDN5-220ENST00000628881 UBE3BQ7Z3V4 1068 aa17.34■□□□□ 0.37
PFDN5-220ENST00000628881 GRAPLQ8TC17 118 aaPredicted RBP17.34■□□□□ 0.37
PFDN5-220ENST00000628881 SRCIN1Q9C0H9 1055 aa17.34■□□□□ 0.37
PFDN5-220ENST00000628881 LTBP3Q9NS15 1303 aa17.34■□□□□ 0.37
PFDN5-220ENST00000628881 MYH3P11055 1940 aa17.33■□□□□ 0.37
PFDN5-220ENST00000628881 CASP7P55210 303 aa17.33■□□□□ 0.36
PFDN5-220ENST00000628881 CCDC152Q4G0S7 254 aa17.33■□□□□ 0.36
PFDN5-220ENST00000628881 C9orf131Q5VYM1 1079 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms