RNA–Protein interactions for RNA: ENST00000628549.1

UBE2A-207, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2 BASIC

Gene UBE2A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-207ENST00000628549 NPR1P16066 1061 aa33.63■■■□□ 2.97
UBE2A-207ENST00000628549 NLRP10Q86W26 655 aa33.63■■■□□ 2.97
UBE2A-207ENST00000628549 SPINK5Q9NQ38 1064 aaPredicted RBP33.63■■■□□ 2.97
UBE2A-207ENST00000628549 TNRC6CQ9HCJ0 1690 aaKnown RBP33.63■■■□□ 2.97
UBE2A-207ENST00000628549 ABCC12Q96J65 1359 aa33.62■■■□□ 2.97
UBE2A-207ENST00000628549 KLRG2A4D1S0 409 aaPredicted RBP33.62■■■□□ 2.97
UBE2A-207ENST00000628549 E9PSI1 815 aa33.6■■■□□ 2.97
UBE2A-207ENST00000628549 SLX4Q8IY92 1834 aa33.6■■■□□ 2.97
UBE2A-207ENST00000628549 TCERG1O14776 1098 aaKnown RBP33.59■■■□□ 2.97
UBE2A-207ENST00000628549 VAMP4O75379 141 aa33.59■■■□□ 2.97
UBE2A-207ENST00000628549 TRMT112Q9UI30 125 aaKnown RBP33.59■■■□□ 2.97
UBE2A-207ENST00000628549 SLC4A2P04920 1241 aa33.58■■■□□ 2.97
UBE2A-207ENST00000628549 ALDH1B1P30837 517 aa33.57■■■□□ 2.96
UBE2A-207ENST00000628549 RPGRQ92834 1020 aaKnown RBP33.57■■■□□ 2.96
UBE2A-207ENST00000628549 ISCA1Q9BUE6 129 aa33.57■■■□□ 2.96
UBE2A-207ENST00000628549 SH3TC1Q8TE82 1336 aa33.56■■■□□ 2.96
UBE2A-207ENST00000628549 NLRP3Q96P20 1036 aa33.56■■■□□ 2.96
UBE2A-207ENST00000628549 SBF1O95248 1867 aa33.56■■■□□ 2.96
UBE2A-207ENST00000628549 ATP5J2-PTCD1G3V325 749 aa33.55■■■□□ 2.96
UBE2A-207ENST00000628549 SOGA3Q5TF21 947 aa33.55■■■□□ 2.96
UBE2A-207ENST00000628549 PRPF40BQ6NWY9 871 aaKnown RBP33.55■■■□□ 2.96
UBE2A-207ENST00000628549 TRIM28Q13263 835 aaKnown RBP33.54■■■□□ 2.96
UBE2A-207ENST00000628549 CRY2Q49AN0 593 aa33.54■■■□□ 2.96
UBE2A-207ENST00000628549 SLC10A5Q5PT55 438 aa33.54■■■□□ 2.96
UBE2A-207ENST00000628549 KSR2Q6VAB6 950 aa33.54■■■□□ 2.96
UBE2A-207ENST00000628549 CCDC88AQ3V6T2 1871 aa33.53■■■□□ 2.96
UBE2A-207ENST00000628549 LAMB2P55268 1798 aa33.53■■■□□ 2.96
UBE2A-207ENST00000628549 MYD88Q99836 296 aa33.53■■■□□ 2.96
UBE2A-207ENST00000628549 ZNF219Q9P2Y4 722 aaPredicted RBP33.53■■■□□ 2.96
UBE2A-207ENST00000628549 FER1L6Q2WGJ9 1857 aa33.52■■■□□ 2.96
UBE2A-207ENST00000628549 C21orf2O43822 256 aa33.52■■■□□ 2.96
UBE2A-207ENST00000628549 NEXNQ0ZGT2 675 aa33.52■■■□□ 2.96
UBE2A-207ENST00000628549 ZNF784Q8NCA9 323 aaPredicted RBP33.52■■■□□ 2.96
UBE2A-207ENST00000628549 METTL22Q9BUU2 404 aaPredicted RBP33.52■■■□□ 2.96
UBE2A-207ENST00000628549 MAP3K2Q9Y2U5 619 aa33.52■■■□□ 2.96
UBE2A-207ENST00000628549 PI4KAP2A4QPH2 592 aa33.5■■■□□ 2.95
UBE2A-207ENST00000628549 SLFN5Q08AF3 891 aa33.5■■■□□ 2.95
UBE2A-207ENST00000628549 FLIIQ13045 1269 aa33.5■■■□□ 2.95
UBE2A-207ENST00000628549 PI4KAP1Q8N8J0 262 aa33.5■■■□□ 2.95
UBE2A-207ENST00000628549 RBM17Q96I25 401 aaKnown RBP33.5■■■□□ 2.95
UBE2A-207ENST00000628549 CCDC191Q8NCU4 936 aa33.49■■■□□ 2.95
UBE2A-207ENST00000628549 ADCY9O60503 1353 aa33.48■■■□□ 2.95
UBE2A-207ENST00000628549 DDX60Q8IY21 1712 aaKnown RBP33.48■■■□□ 2.95
UBE2A-207ENST00000628549 HOXA10P31260 410 aaPredicted RBP33.48■■■□□ 2.95
UBE2A-207ENST00000628549 FKBP5Q13451 457 aaPredicted RBP33.48■■■□□ 2.95
UBE2A-207ENST00000628549 G2E3Q7L622 706 aa33.48■■■□□ 2.95
UBE2A-207ENST00000628549 HSP90B1P14625 803 aaKnown RBP33.47■■■□□ 2.95
UBE2A-207ENST00000628549 CWC25Q9NXE8 425 aaPredicted RBP33.47■■■□□ 2.95
UBE2A-207ENST00000628549 HCLS1P14317 486 aaPredicted RBP33.46■■■□□ 2.95
UBE2A-207ENST00000628549 C9orf131Q5VYM1 1079 aa33.46■■■□□ 2.95
UBE2A-207ENST00000628549 CRAMP1Q96RY5 1269 aa33.46■■■□□ 2.95
UBE2A-207ENST00000628549 RASSF7Q02833 373 aa33.45■■■□□ 2.95
UBE2A-207ENST00000628549 CCDC93Q567U6 631 aa33.45■■■□□ 2.95
UBE2A-207ENST00000628549 FAM89AQ96GI7 184 aa33.45■■■□□ 2.95
UBE2A-207ENST00000628549 RNF181Q9P0P0 153 aa33.45■■■□□ 2.95
UBE2A-207ENST00000628549 LMNB1P20700 586 aa33.44■■■□□ 2.94
UBE2A-207ENST00000628549 ZBTB38Q8NAP3 1195 aaPredicted RBP33.44■■■□□ 2.94
UBE2A-207ENST00000628549 ZNF428Q96B54 188 aa33.44■■■□□ 2.94
UBE2A-207ENST00000628549 SYNE4Q8N205 404 aa33.43■■■□□ 2.94
UBE2A-207ENST00000628549 DICER1Q9UPY3 1922 aaKnown RBP33.43■■■□□ 2.94
UBE2A-207ENST00000628549 C3orf67Q6ZVT6 689 aa33.42■■■□□ 2.94
UBE2A-207ENST00000628549 CDCA7LQ96GN5 454 aa33.42■■■□□ 2.94
UBE2A-207ENST00000628549 TAOK3Q9H2K8 898 aa33.42■■■□□ 2.94
UBE2A-207ENST00000628549 NFKBIEO00221 500 aa33.41■■■□□ 2.94
UBE2A-207ENST00000628549 RTL5Q5HYW3 569 aaPredicted RBP33.41■■■□□ 2.94
UBE2A-207ENST00000628549 C7orf43Q8WVR3 580 aa33.41■■■□□ 2.94
UBE2A-207ENST00000628549 TMX4Q9H1E5 349 aaPredicted RBP33.41■■■□□ 2.94
UBE2A-207ENST00000628549 LTBP3Q9NS15 1303 aa33.4■■■□□ 2.94
UBE2A-207ENST00000628549 IRS4O14654 1257 aaPredicted RBP33.4■■■□□ 2.94
UBE2A-207ENST00000628549 PCCAP05165 728 aaPredicted RBP33.4■■■□□ 2.94
UBE2A-207ENST00000628549 CC2D2BQ6DHV5 1058 aa33.4■■■□□ 2.94
UBE2A-207ENST00000628549 DDX46Q7L014 1031 aaKnown RBP33.4■■■□□ 2.94
UBE2A-207ENST00000628549 DNAAF4Q8WXU2 420 aa33.4■■■□□ 2.94
UBE2A-207ENST00000628549 RTKN2Q8IZC4 609 aa33.39■■■□□ 2.94
UBE2A-207ENST00000628549 TIAM2Q8IVF5 1701 aa33.39■■■□□ 2.94
UBE2A-207ENST00000628549 PPEF1O14829 653 aaPredicted RBP33.38■■■□□ 2.93
UBE2A-207ENST00000628549 MYH3P11055 1940 aa33.38■■■□□ 2.93
UBE2A-207ENST00000628549 ZC3H4Q9UPT8 1303 aaKnown RBP33.37■■■□□ 2.93
UBE2A-207ENST00000628549 HNRNPUQ00839 825 aaKnown RBP eCLIP33.37■■■□□ 2.93
UBE2A-207ENST00000628549 GRIPAP1Q4V328 841 aa33.37■■■□□ 2.93
UBE2A-207ENST00000628549 GPBP1L1Q9HC44 474 aaPredicted RBP33.37■■■□□ 2.93
UBE2A-207ENST00000628549 ABCC4O15439 1325 aa33.36■■■□□ 2.93
UBE2A-207ENST00000628549 IGKV5-2P06315 115 aa33.36■■■□□ 2.93
UBE2A-207ENST00000628549 TRMT2AQ8IZ69 625 aaKnown RBP33.36■■■□□ 2.93
UBE2A-207ENST00000628549 NEURL1BA8MQ27 555 aa33.34■■■□□ 2.93
UBE2A-207ENST00000628549 CT47B1P0C2W7 299 aaPredicted RBP33.34■■■□□ 2.93
UBE2A-207ENST00000628549 FKBP4Q02790 459 aaKnown RBP eCLIP33.34■■■□□ 2.93
UBE2A-207ENST00000628549 SF3B3Q15393 1217 aaKnown RBP33.34■■■□□ 2.93
UBE2A-207ENST00000628549 LINS1Q8NG48 757 aa33.34■■■□□ 2.93
UBE2A-207ENST00000628549 ZNF526Q8TF50 670 aaPredicted RBP33.34■■■□□ 2.93
UBE2A-207ENST00000628549 TAF1P21675 1872 aa33.33■■■□□ 2.93
UBE2A-207ENST00000628549 BBOX1O75936 387 aa33.33■■■□□ 2.93
UBE2A-207ENST00000628549 CWF19L2Q2TBE0 894 aaKnown RBP33.33■■■□□ 2.93
UBE2A-207ENST00000628549 CDHR2Q9BYE9 1310 aa33.32■■■□□ 2.93
UBE2A-207ENST00000628549 GRAPQ13588 217 aa33.32■■■□□ 2.92
UBE2A-207ENST00000628549 GRAPLQ8TC17 118 aaPredicted RBP33.32■■■□□ 2.92
UBE2A-207ENST00000628549 PDE8AO60658 829 aa33.31■■■□□ 2.92
UBE2A-207ENST00000628549 ALDH1L2Q3SY69 923 aa33.3■■■□□ 2.92
UBE2A-207ENST00000628549 OLFM4Q6UX06 510 aa33.3■■■□□ 2.92
UBE2A-207ENST00000628549 TMC4Q7Z404 712 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms