RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 ZNF853P0CG23 659 aa15.77■□□□□ 0.12
UBR1-212ENST00000627960 FKBP4Q02790 459 aaKnown RBP eCLIP15.77■□□□□ 0.12
UBR1-212ENST00000627960 FSTL1Q12841 308 aa15.77■□□□□ 0.12
UBR1-212ENST00000627960 HSP90AB3PQ58FF7 597 aa15.77■□□□□ 0.12
UBR1-212ENST00000627960 HDGFL1Q5TGJ6 251 aa15.77■□□□□ 0.12
UBR1-212ENST00000627960 OLFM4Q6UX06 510 aa15.77■□□□□ 0.12
UBR1-212ENST00000627960 RTKN2Q8IZC4 609 aa15.77■□□□□ 0.12
UBR1-212ENST00000627960 UTP14AQ9BVJ6 771 aaKnown RBP15.77■□□□□ 0.12
UBR1-212ENST00000627960 POTECB2RU33 542 aa15.76■□□□□ 0.11
UBR1-212ENST00000627960 CCDC184Q52MB2 194 aa15.76■□□□□ 0.11
UBR1-212ENST00000627960 SLC10A5Q5PT55 438 aa15.76■□□□□ 0.11
UBR1-212ENST00000627960 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
UBR1-212ENST00000627960 MBIPQ9NS73 344 aa15.76■□□□□ 0.11
UBR1-212ENST00000627960 CHPF2Q9P2E5 772 aa15.76■□□□□ 0.11
UBR1-212ENST00000627960 GNAI1P63096 354 aa15.75■□□□□ 0.11
UBR1-212ENST00000627960 CALD1Q05682 793 aaKnown RBP15.75■□□□□ 0.11
UBR1-212ENST00000627960 TCIRG1Q13488 830 aa15.75■□□□□ 0.11
UBR1-212ENST00000627960 DUSP27Q5VZP5 1158 aa15.75■□□□□ 0.11
UBR1-212ENST00000627960 CRAMP1Q96RY5 1269 aa15.75■□□□□ 0.11
UBR1-212ENST00000627960 IFT57Q9NWB7 429 aa15.75■□□□□ 0.11
UBR1-212ENST00000627960 DBF4Q9UBU7 674 aaPredicted RBP15.75■□□□□ 0.11
UBR1-212ENST00000627960 RNF123Q5XPI4 1314 aa15.74■□□□□ 0.11
UBR1-212ENST00000627960 CC2D2BQ6DHV5 1058 aa15.74■□□□□ 0.11
UBR1-212ENST00000627960 C3orf67Q6ZVT6 689 aa15.74■□□□□ 0.11
UBR1-212ENST00000627960 NLRP10Q86W26 655 aa15.74■□□□□ 0.11
UBR1-212ENST00000627960 SYNE4Q8N205 404 aa15.74■□□□□ 0.11
UBR1-212ENST00000627960 SMC1BQ8NDV3 1235 aa15.74■□□□□ 0.11
UBR1-212ENST00000627960 RBM17Q96I25 401 aaKnown RBP15.74■□□□□ 0.11
UBR1-212ENST00000627960 NLRP3Q96P20 1036 aa15.74■□□□□ 0.11
UBR1-212ENST00000627960 ZNF277Q9NRM2 450 aaPredicted RBP15.74■□□□□ 0.11
UBR1-212ENST00000627960 LAMB2P55268 1798 aa15.74■□□□□ 0.11
UBR1-212ENST00000627960 ZNF316A6NFI3 1004 aaPredicted RBP15.73■□□□□ 0.11
UBR1-212ENST00000627960 DDNO94850 711 aaPredicted RBP15.73■□□□□ 0.11
UBR1-212ENST00000627960 PLBD2Q8NHP8 589 aa15.73■□□□□ 0.11
UBR1-212ENST00000627960 SNED1Q8TER0 1413 aa15.73■□□□□ 0.11
UBR1-212ENST00000627960 IARSP41252 1262 aaKnown RBP15.72■□□□□ 0.11
UBR1-212ENST00000627960 ANKRD13DQ6ZTN6 518 aa15.72■□□□□ 0.11
UBR1-212ENST00000627960 PSMD1Q99460 953 aa15.72■□□□□ 0.11
UBR1-212ENST00000627960 HYPKQ9NX55 129 aa15.72■□□□□ 0.11
UBR1-212ENST00000627960 GRIPAP1Q4V328 841 aa15.71■□□□□ 0.11
UBR1-212ENST00000627960 DNAJC5GQ8N7S2 189 aa15.71■□□□□ 0.11
UBR1-212ENST00000627960 TRMT112Q9UI30 125 aaKnown RBP15.71■□□□□ 0.11
UBR1-212ENST00000627960 SCN4AP35499 1836 aa15.71■□□□□ 0.1
UBR1-212ENST00000627960 PPEF1O14829 653 aaPredicted RBP15.7■□□□□ 0.1
UBR1-212ENST00000627960 ISCA1Q9BUE6 129 aa15.7■□□□□ 0.1
UBR1-212ENST00000627960 SH3TC1Q8TE82 1336 aa15.69■□□□□ 0.1
UBR1-212ENST00000627960 ELL2O00472 640 aaPredicted RBP15.69■□□□□ 0.1
UBR1-212ENST00000627960 TCERG1O14776 1098 aaKnown RBP15.69■□□□□ 0.1
UBR1-212ENST00000627960 HCLS1P14317 486 aaPredicted RBP15.69■□□□□ 0.1
UBR1-212ENST00000627960 C8orf58Q8NAV2 365 aa15.69■□□□□ 0.1
UBR1-212ENST00000627960 L3MBTL3Q96JM7 780 aaPredicted RBP15.69■□□□□ 0.1
UBR1-212ENST00000627960 ABCC4O15439 1325 aa15.68■□□□□ 0.1
UBR1-212ENST00000627960 ZNF541Q9H0D2 1346 aa15.68■□□□□ 0.1
UBR1-212ENST00000627960 TAF1P21675 1872 aa15.68■□□□□ 0.1
UBR1-212ENST00000627960 FZD9O00144 591 aa15.68■□□□□ 0.1
UBR1-212ENST00000627960 ANP32CO43423 234 aa15.68■□□□□ 0.1
UBR1-212ENST00000627960 CCDC27Q2M243 656 aa15.68■□□□□ 0.1
UBR1-212ENST00000627960 DDX60Q8IY21 1712 aaKnown RBP15.68■□□□□ 0.1
UBR1-212ENST00000627960 IQCA1LA6NCM1 817 aa15.67■□□□□ 0.1
UBR1-212ENST00000627960 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
UBR1-212ENST00000627960 BBOX1O75936 387 aa15.67■□□□□ 0.1
UBR1-212ENST00000627960 HTRA3P83110 453 aa15.67■□□□□ 0.1
UBR1-212ENST00000627960 SLC51AQ86UW1 340 aa15.67■□□□□ 0.1
UBR1-212ENST00000627960 JDP2Q8WYK2 163 aa15.67■□□□□ 0.1
UBR1-212ENST00000627960 MRS2Q9HD23 443 aa15.67■□□□□ 0.1
UBR1-212ENST00000627960 ATP6V0A2Q9Y487 856 aa15.67■□□□□ 0.1
UBR1-212ENST00000627960 TRIM28Q13263 835 aaKnown RBP15.66■□□□□ 0.1
UBR1-212ENST00000627960 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
UBR1-212ENST00000627960 DDX46Q7L014 1031 aaKnown RBP15.66■□□□□ 0.1
UBR1-212ENST00000627960 ZNF428Q96B54 188 aa15.66■□□□□ 0.1
UBR1-212ENST00000627960 CHMP4AQ9BY43 222 aa15.66■□□□□ 0.1
UBR1-212ENST00000627960 TMX4Q9H1E5 349 aaPredicted RBP15.66■□□□□ 0.1
UBR1-212ENST00000627960 PHAXQ9H814 394 aaKnown RBP15.66■□□□□ 0.1
UBR1-212ENST00000627960 COL4A5P29400 1685 aa15.66■□□□□ 0.1
UBR1-212ENST00000627960 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
UBR1-212ENST00000627960 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
UBR1-212ENST00000627960 RIC3Q7Z5B4 369 aa15.65■□□□□ 0.1
UBR1-212ENST00000627960 WWC1Q8IX03 1113 aa15.65■□□□□ 0.1
UBR1-212ENST00000627960 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
UBR1-212ENST00000627960 FAM89AQ96GI7 184 aa15.65■□□□□ 0.1
UBR1-212ENST00000627960 TAF1DQ9H5J8 278 aaPredicted RBP15.65■□□□□ 0.1
UBR1-212ENST00000627960 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
UBR1-212ENST00000627960 POTEJP0CG39 1038 aa15.64■□□□□ 0.09
UBR1-212ENST00000627960 GRAPQ13588 217 aa15.64■□□□□ 0.09
UBR1-212ENST00000627960 CCDC30Q5VVM6 783 aa15.64■□□□□ 0.09
UBR1-212ENST00000627960 GPC2Q8N158 579 aa15.64■□□□□ 0.09
UBR1-212ENST00000627960 LARGE2Q8N3Y3 721 aa15.64■□□□□ 0.09
UBR1-212ENST00000627960 TSPYL6Q8N831 410 aa15.64■□□□□ 0.09
UBR1-212ENST00000627960 GRAPLQ8TC17 118 aaPredicted RBP15.64■□□□□ 0.09
UBR1-212ENST00000627960 TSR2Q969E8 191 aaKnown RBP15.64■□□□□ 0.09
UBR1-212ENST00000627960 EIF6P56537 245 aaKnown RBP15.63■□□□□ 0.09
UBR1-212ENST00000627960 SF3B3Q15393 1217 aaKnown RBP15.63■□□□□ 0.09
UBR1-212ENST00000627960 KLRG1Q96E93 195 aa15.63■□□□□ 0.09
UBR1-212ENST00000627960 RTFDC1Q9BY42 306 aaPredicted RBP15.63■□□□□ 0.09
UBR1-212ENST00000627960 VPS33BQ9H267 617 aa15.63■□□□□ 0.09
UBR1-212ENST00000627960 HACL1Q9UJ83 578 aa15.63■□□□□ 0.09
UBR1-212ENST00000627960 PPIP5K2O43314 1243 aa15.62■□□□□ 0.09
UBR1-212ENST00000627960 LDHDQ86WU2 507 aa15.62■□□□□ 0.09
UBR1-212ENST00000627960 MPNDQ8N594 471 aa15.62■□□□□ 0.09
UBR1-212ENST00000627960 SUPT20HQ8NEM7 779 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms