RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 ZNF831Q5JPB2 1677 aa16.77■□□□□ 0.28
PDXDC1-218ENST00000627450 PROM2Q8N271 834 aa16.77■□□□□ 0.28
PDXDC1-218ENST00000627450 TAF1LQ8IZX4 1826 aa16.77■□□□□ 0.28
PDXDC1-218ENST00000627450 ERVV-1B6SEH8 477 aa16.77■□□□□ 0.27
PDXDC1-218ENST00000627450 MTX1Q13505 466 aa16.76■□□□□ 0.27
PDXDC1-218ENST00000627450 SRP68Q9UHB9 627 aaKnown RBP16.76■□□□□ 0.27
PDXDC1-218ENST00000627450 APBA3O96018 575 aa16.75■□□□□ 0.27
PDXDC1-218ENST00000627450 TRIM28Q13263 835 aaKnown RBP16.75■□□□□ 0.27
PDXDC1-218ENST00000627450 LMBR1LQ6UX01 489 aa16.75■□□□□ 0.27
PDXDC1-218ENST00000627450 CCDC85AQ96PX6 553 aaPredicted RBP16.75■□□□□ 0.27
PDXDC1-218ENST00000627450 SIL1Q9H173 461 aa16.75■□□□□ 0.27
PDXDC1-218ENST00000627450 IL1RAPL2Q9NP60 686 aa16.75■□□□□ 0.27
PDXDC1-218ENST00000627450 CHMP3Q9Y3E7 222 aa16.75■□□□□ 0.27
PDXDC1-218ENST00000627450 RPS6KA4O75676 772 aa16.75■□□□□ 0.27
PDXDC1-218ENST00000627450 FOXO4P98177 505 aa16.75■□□□□ 0.27
PDXDC1-218ENST00000627450 RC3H1Q5TC82 1133 aaKnown RBP16.74■□□□□ 0.27
PDXDC1-218ENST00000627450 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
PDXDC1-218ENST00000627450 RTCBQ9Y3I0 505 aaKnown RBP16.74■□□□□ 0.27
PDXDC1-218ENST00000627450 IBTKQ9P2D0 1353 aaPredicted RBP16.74■□□□□ 0.27
PDXDC1-218ENST00000627450 TXNRD1Q16881 649 aa16.74■□□□□ 0.27
PDXDC1-218ENST00000627450 HSP90AB3PQ58FF7 597 aa16.74■□□□□ 0.27
PDXDC1-218ENST00000627450 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
PDXDC1-218ENST00000627450 HDAC5Q9UQL6 1122 aa16.74■□□□□ 0.27
PDXDC1-218ENST00000627450 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 ARHGEF1Q92888 912 aaKnown RBP16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 NIP7Q9Y221 180 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 SUSD4Q5VX71 490 aa16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 ZBTB38Q8NAP3 1195 aaPredicted RBP16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 AK7Q96M32 723 aa16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 LRRCC1Q9C099 1032 aa16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 RABL6Q3YEC7 729 aaPredicted RBP16.73■□□□□ 0.27
PDXDC1-218ENST00000627450 ANKRD36CQ5JPF3 1778 aa16.72■□□□□ 0.27
PDXDC1-218ENST00000627450 PCCAP05165 728 aaPredicted RBP16.72■□□□□ 0.27
PDXDC1-218ENST00000627450 TSHZ3Q63HK5 1081 aa16.72■□□□□ 0.27
PDXDC1-218ENST00000627450 BCL2L12Q9HB09 334 aa16.72■□□□□ 0.27
PDXDC1-218ENST00000627450 OS9Q13438 667 aaPredicted RBP16.72■□□□□ 0.27
PDXDC1-218ENST00000627450 PLEKHM2Q8IWE5 1019 aa16.71■□□□□ 0.27
PDXDC1-218ENST00000627450 NUTM1Q86Y26 1132 aa16.71■□□□□ 0.26
PDXDC1-218ENST00000627450 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.26
PDXDC1-218ENST00000627450 RFX5P48382 616 aaPredicted RBP16.7■□□□□ 0.26
PDXDC1-218ENST00000627450 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
PDXDC1-218ENST00000627450 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
PDXDC1-218ENST00000627450 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.7■□□□□ 0.26
PDXDC1-218ENST00000627450 PTPN12Q05209 780 aaKnown RBP16.7■□□□□ 0.26
PDXDC1-218ENST00000627450 SLC27A3Q5K4L6 730 aa16.7■□□□□ 0.26
PDXDC1-218ENST00000627450 ZNF594Q96JF6 807 aaPredicted RBP16.7■□□□□ 0.26
PDXDC1-218ENST00000627450 IRS4O14654 1257 aaPredicted RBP16.69■□□□□ 0.26
PDXDC1-218ENST00000627450 ZPR1O75312 459 aa16.69■□□□□ 0.26
PDXDC1-218ENST00000627450 HCLS1P14317 486 aaPredicted RBP16.69■□□□□ 0.26
PDXDC1-218ENST00000627450 BACH2Q9BYV9 841 aa16.69■□□□□ 0.26
PDXDC1-218ENST00000627450 NARFQ9UHQ1 456 aa16.69■□□□□ 0.26
PDXDC1-218ENST00000627450 NOP58Q9Y2X3 529 aaKnown RBP16.69■□□□□ 0.26
PDXDC1-218ENST00000627450 RFC4P35249 363 aa16.69■□□□□ 0.26
PDXDC1-218ENST00000627450 TRAPPC3LQ5T215 181 aa16.69■□□□□ 0.26
PDXDC1-218ENST00000627450 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
PDXDC1-218ENST00000627450 ZNF652Q9Y2D9 606 aa16.68■□□□□ 0.26
PDXDC1-218ENST00000627450 PLSCR1O15162 318 aa16.68■□□□□ 0.26
PDXDC1-218ENST00000627450 SASH1O94885 1247 aa16.68■□□□□ 0.26
PDXDC1-218ENST00000627450 ILDR1Q86SU0 546 aaPredicted RBP16.68■□□□□ 0.26
PDXDC1-218ENST00000627450 RBM19Q9Y4C8 960 aaKnown RBP16.68■□□□□ 0.26
PDXDC1-218ENST00000627450 BCORQ6W2J9 1755 aa16.67■□□□□ 0.26
PDXDC1-218ENST00000627450 CLEC4GQ6UXB4 293 aa16.67■□□□□ 0.26
PDXDC1-218ENST00000627450 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
PDXDC1-218ENST00000627450 UTP14AQ9BVJ6 771 aaKnown RBP16.67■□□□□ 0.26
PDXDC1-218ENST00000627450 RAB11FIP3O75154 756 aa16.67■□□□□ 0.26
PDXDC1-218ENST00000627450 G3BP1Q13283 466 aaKnown RBP eCLIP16.67■□□□□ 0.261e-7■■□□□ 13.3
PDXDC1-218ENST00000627450 CCDC24Q8N4L8 307 aa16.67■□□□□ 0.26
PDXDC1-218ENST00000627450 NTSR2O95665 410 aa16.66■□□□□ 0.26
PDXDC1-218ENST00000627450 ZNF827Q17R98 1081 aa16.66■□□□□ 0.26
PDXDC1-218ENST00000627450 GSPT1P15170 499 aaKnown RBP16.66■□□□□ 0.26
PDXDC1-218ENST00000627450 GREM2Q9H772 168 aa16.66■□□□□ 0.26
PDXDC1-218ENST00000627450 COPRSQ9NQ92 184 aa16.66■□□□□ 0.26
PDXDC1-218ENST00000627450 C4AP0C0L4 1744 aa16.66■□□□□ 0.26
PDXDC1-218ENST00000627450 UBR3Q6ZT12 1888 aa16.66■□□□□ 0.26
PDXDC1-218ENST00000627450 EN1Q05925 392 aaPredicted RBP16.65■□□□□ 0.26
PDXDC1-218ENST00000627450 TTLL11Q8NHH1 800 aa16.65■□□□□ 0.26
PDXDC1-218ENST00000627450 SH3TC1Q8TE82 1336 aa16.65■□□□□ 0.26
PDXDC1-218ENST00000627450 USP42Q9H9J4 1324 aaKnown RBP16.65■□□□□ 0.26
PDXDC1-218ENST00000627450 CDHR2Q9BYE9 1310 aa16.65■□□□□ 0.26
PDXDC1-218ENST00000627450 PDE1AP54750 535 aa16.65■□□□□ 0.26
PDXDC1-218ENST00000627450 PARP10Q53GL7 1025 aa16.65■□□□□ 0.26
PDXDC1-218ENST00000627450 HSP90AB4PQ58FF6 505 aa16.65■□□□□ 0.26
PDXDC1-218ENST00000627450 PUS3Q9BZE2 481 aaKnown RBP16.65■□□□□ 0.26
PDXDC1-218ENST00000627450 CTSWP56202 376 aa16.64■□□□□ 0.26
PDXDC1-218ENST00000627450 LRRC24Q50LG9 513 aa16.64■□□□□ 0.26
PDXDC1-218ENST00000627450 PLA2G12BQ9BX93 195 aa16.64■□□□□ 0.26
PDXDC1-218ENST00000627450 SALL3Q9BXA9 1300 aa16.64■□□□□ 0.25
PDXDC1-218ENST00000627450 SEC24BO95487 1268 aa16.64■□□□□ 0.25
PDXDC1-218ENST00000627450 CSF1RP07333 972 aa16.64■□□□□ 0.25
PDXDC1-218ENST00000627450 CCDC57Q2TAC2 916 aa16.64■□□□□ 0.25
PDXDC1-218ENST00000627450 TFCP2L1Q9NZI6 479 aa16.64■□□□□ 0.25
PDXDC1-218ENST00000627450 TNS1Q9HBL0 1735 aaKnown RBP16.64■□□□□ 0.25
PDXDC1-218ENST00000627450 SCN7AQ01118 1682 aa16.64■□□□□ 0.25
PDXDC1-218ENST00000627450 EZH2Q15910 746 aaKnown RBP16.63■□□□□ 0.25
PDXDC1-218ENST00000627450 ERFEQ4G0M1 354 aa16.63■□□□□ 0.25
PDXDC1-218ENST00000627450 SETDB2Q96T68 719 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms