RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 FLIIQ13045 1269 aa11.8□□□□□ -0.52
NELFE-214ENST00000625905 ERFEQ4G0M1 354 aa11.8□□□□□ -0.52
NELFE-214ENST00000625905 CACNA1SQ13698 1873 aa11.8□□□□□ -0.52
NELFE-214ENST00000625905 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
NELFE-214ENST00000625905 FKBP5Q13451 457 aaPredicted RBP11.79□□□□□ -0.52
NELFE-214ENST00000625905 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
NELFE-214ENST00000625905 G2E3Q7L622 706 aa11.79□□□□□ -0.52
NELFE-214ENST00000625905 ZNF622Q969S3 477 aaKnown RBP eCLIP11.79□□□□□ -0.522e-10■□□□□ 9.5
NELFE-214ENST00000625905 MYD88Q99836 296 aa11.79□□□□□ -0.52
NELFE-214ENST00000625905 ISCA1Q9BUE6 129 aa11.79□□□□□ -0.52
NELFE-214ENST00000625905 TRMT112Q9UI30 125 aaKnown RBP11.79□□□□□ -0.52
NELFE-214ENST00000625905 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
NELFE-214ENST00000625905 CHD4Q14839 1912 aa11.79□□□□□ -0.52
NELFE-214ENST00000625905 SH3TC1Q8TE82 1336 aa11.79□□□□□ -0.52
NELFE-214ENST00000625905 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
NELFE-214ENST00000625905 SRGNP10124 158 aa11.78□□□□□ -0.52
NELFE-214ENST00000625905 NEXNQ0ZGT2 675 aa11.78□□□□□ -0.52
NELFE-214ENST00000625905 STYK1Q6J9G0 422 aa11.78□□□□□ -0.52
NELFE-214ENST00000625905 TTLL6Q8N841 843 aa11.78□□□□□ -0.52
NELFE-214ENST00000625905 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
NELFE-214ENST00000625905 ZNF428Q96B54 188 aa11.78□□□□□ -0.52
NELFE-214ENST00000625905 MASTLQ96GX5 879 aa11.78□□□□□ -0.52
NELFE-214ENST00000625905 METTL22Q9BUU2 404 aaPredicted RBP11.78□□□□□ -0.52
NELFE-214ENST00000625905 ZBED9Q6R2W3 1325 aa11.78□□□□□ -0.52
NELFE-214ENST00000625905 DDX60Q8IY21 1712 aaKnown RBP11.77□□□□□ -0.52
NELFE-214ENST00000625905 NPR1P16066 1061 aa11.77□□□□□ -0.53
NELFE-214ENST00000625905 PRPF40BQ6NWY9 871 aaKnown RBP11.77□□□□□ -0.53
NELFE-214ENST00000625905 TRMT2AQ8IZ69 625 aaKnown RBP11.77□□□□□ -0.53
NELFE-214ENST00000625905 RPGRQ92834 1020 aaKnown RBP11.77□□□□□ -0.53
NELFE-214ENST00000625905 CNKSR1Q969H4 720 aa11.77□□□□□ -0.53
NELFE-214ENST00000625905 CWC25Q9NXE8 425 aaPredicted RBP11.77□□□□□ -0.53
NELFE-214ENST00000625905 KLRG2A4D1S0 409 aaPredicted RBP11.76□□□□□ -0.53
NELFE-214ENST00000625905 CT47B1P0C2W7 299 aaPredicted RBP11.76□□□□□ -0.53
NELFE-214ENST00000625905 TRIM28Q13263 835 aaKnown RBP11.76□□□□□ -0.53
NELFE-214ENST00000625905 CRY2Q49AN0 593 aa11.76□□□□□ -0.53
NELFE-214ENST00000625905 CCDC191Q8NCU4 936 aa11.76□□□□□ -0.53
NELFE-214ENST00000625905 DNAAF4Q8WXU2 420 aa11.76□□□□□ -0.53
NELFE-214ENST00000625905 SLX4Q8IY92 1834 aa11.75□□□□□ -0.53
NELFE-214ENST00000625905 YY1P25490 414 aa11.75□□□□□ -0.53
NELFE-214ENST00000625905 ARHGAP27Q6ZUM4 889 aa11.75□□□□□ -0.53
NELFE-214ENST00000625905 NLRP3Q96P20 1036 aa11.75□□□□□ -0.53
NELFE-214ENST00000625905 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
NELFE-214ENST00000625905 SMC4Q9NTJ3 1288 aa11.75□□□□□ -0.53
NELFE-214ENST00000625905 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
NELFE-214ENST00000625905 CWF19L2Q2TBE0 894 aaKnown RBP11.74□□□□□ -0.53
NELFE-214ENST00000625905 RTL5Q5HYW3 569 aaPredicted RBP11.74□□□□□ -0.53
NELFE-214ENST00000625905 SLC10A5Q5PT55 438 aa11.74□□□□□ -0.53
NELFE-214ENST00000625905 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
NELFE-214ENST00000625905 SYNE4Q8N205 404 aa11.74□□□□□ -0.53
NELFE-214ENST00000625905 ZBTB38Q8NAP3 1195 aaPredicted RBP11.74□□□□□ -0.53
NELFE-214ENST00000625905 SSH1Q8WYL5 1049 aa11.74□□□□□ -0.53
NELFE-214ENST00000625905 FAM89AQ96GI7 184 aa11.74□□□□□ -0.53
NELFE-214ENST00000625905 NEURL1BA8MQ27 555 aa11.73□□□□□ -0.53
NELFE-214ENST00000625905 F6X3S4 739 aa11.73□□□□□ -0.53
NELFE-214ENST00000625905 IRS4O14654 1257 aaPredicted RBP11.73□□□□□ -0.53
NELFE-214ENST00000625905 PCCAP05165 728 aaPredicted RBP11.73□□□□□ -0.53
NELFE-214ENST00000625905 IGKV5-2P06315 115 aa11.73□□□□□ -0.53
NELFE-214ENST00000625905 PTPRCP08575 1304 aa11.73□□□□□ -0.53
NELFE-214ENST00000625905 HSP90B1P14625 803 aaKnown RBP11.73□□□□□ -0.53
NELFE-214ENST00000625905 GOLGB1Q14789 3259 aaKnown RBP11.73□□□□□ -0.53
NELFE-214ENST00000625905 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
NELFE-214ENST00000625905 SOGA3Q5TF21 947 aa11.73□□□□□ -0.53
NELFE-214ENST00000625905 MRPL50Q8N5N7 158 aaKnown RBP11.73□□□□□ -0.53
NELFE-214ENST00000625905 LINS1Q8NG48 757 aa11.73□□□□□ -0.53
NELFE-214ENST00000625905 RBM17Q96I25 401 aaKnown RBP11.73□□□□□ -0.53
NELFE-214ENST00000625905 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
NELFE-214ENST00000625905 C21orf2O43822 256 aa11.72□□□□□ -0.53
NELFE-214ENST00000625905 ALDH1B1P30837 517 aa11.72□□□□□ -0.53
NELFE-214ENST00000625905 HOXA10P31260 410 aaPredicted RBP11.72□□□□□ -0.53
NELFE-214ENST00000625905 FER1L6Q2WGJ9 1857 aa11.72□□□□□ -0.53
NELFE-214ENST00000625905 ABCC4O15439 1325 aa11.71□□□□□ -0.53
NELFE-214ENST00000625905 CDHR2Q9BYE9 1310 aa11.71□□□□□ -0.53
NELFE-214ENST00000625905 PPEF1O14829 653 aaPredicted RBP11.71□□□□□ -0.53
NELFE-214ENST00000625905 RASSF7Q02833 373 aa11.71□□□□□ -0.53
NELFE-214ENST00000625905 CCDC93Q567U6 631 aa11.71□□□□□ -0.53
NELFE-214ENST00000625905 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.53
NELFE-214ENST00000625905 UBE3BQ7Z3V4 1068 aa11.71□□□□□ -0.53
NELFE-214ENST00000625905 CRAMP1Q96RY5 1269 aa11.71□□□□□ -0.53
NELFE-214ENST00000625905 TIAM2Q8IVF5 1701 aa11.71□□□□□ -0.54
NELFE-214ENST00000625905 MYH3P11055 1940 aa11.7□□□□□ -0.54
NELFE-214ENST00000625905 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
NELFE-214ENST00000625905 GCKRQ14397 625 aa11.7□□□□□ -0.54
NELFE-214ENST00000625905 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
NELFE-214ENST00000625905 JARID2Q92833 1246 aaPredicted RBP11.7□□□□□ -0.54
NELFE-214ENST00000625905 TAOK3Q9H2K8 898 aa11.7□□□□□ -0.54
NELFE-214ENST00000625905 LRRC37AA6NMS7 1700 aa11.69□□□□□ -0.54
NELFE-214ENST00000625905 NFKBIEO00221 500 aa11.69□□□□□ -0.54
NELFE-214ENST00000625905 PDE8AO60658 829 aa11.69□□□□□ -0.54
NELFE-214ENST00000625905 RARSP54136 660 aaKnown RBP11.69□□□□□ -0.54
NELFE-214ENST00000625905 CTSWP56202 376 aa11.69□□□□□ -0.54
NELFE-214ENST00000625905 GRAPQ13588 217 aa11.69□□□□□ -0.54
NELFE-214ENST00000625905 SF3B3Q15393 1217 aaKnown RBP11.69□□□□□ -0.54
NELFE-214ENST00000625905 BEND3Q5T5X7 828 aa11.69□□□□□ -0.54
NELFE-214ENST00000625905 GRAPLQ8TC17 118 aaPredicted RBP11.69□□□□□ -0.54
NELFE-214ENST00000625905 TMX4Q9H1E5 349 aaPredicted RBP11.69□□□□□ -0.54
NELFE-214ENST00000625905 RNF181Q9P0P0 153 aa11.69□□□□□ -0.54
NELFE-214ENST00000625905 LTBP3Q9NS15 1303 aa11.68□□□□□ -0.54
NELFE-214ENST00000625905 UTRNP46939 3433 aa11.68□□□□□ -0.54
NELFE-214ENST00000625905 ALDH1L1O75891 902 aa11.68□□□□□ -0.54
NELFE-214ENST00000625905 LMNB1P20700 586 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms