RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 RANBP6O60518 1105 aaKnown RBP12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 C16orf71Q8IYS4 520 aaPredicted RBP12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 TRIM37O94972 964 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 FAM89AQ96GI7 184 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 CDK5RAP3Q96JB5 506 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 FEZ1Q99689 392 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 ARHGEF40Q8TER5 1519 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 NF2P35240 595 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 ANKRD44Q8N8A2 993 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 WASF1Q92558 559 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 PDRG1Q9NUG6 133 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 AFF2P51816 1311 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 JCADQ9P266 1359 aa12.06□□□□□ -0.48
SRGAP2-217ENST00000624873 LOC102724428A0A0B4J2F2 783 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 CCDC196A0A1B0GTZ2 297 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 PDE8AO60658 829 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 LMOD1P29536 600 aaPredicted RBP12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 SIK1P57059 783 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 UNC13BO14795 1591 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 PDE4BQ07343 736 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 CEP89Q96ST8 783 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 LMTK2Q8IWU2 1503 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 EIF4A1P60842 406 aaKnown RBP12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 NLGN1Q8N2Q7 840 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 HMGB1P09429 215 aaKnown RBP12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 JMYQ8N9B5 988 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 CTCFLQ8NI51 663 aaPredicted RBP12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 ERBB4Q15303 1308 aa12.05□□□□□ -0.48
SRGAP2-217ENST00000624873 TPM1P09493 284 aa12.04□□□□□ -0.48
SRGAP2-217ENST00000624873 STK3Q13188 491 aa12.04□□□□□ -0.48
SRGAP2-217ENST00000624873 ZNF396Q96N95 335 aaPredicted RBP12.04□□□□□ -0.48
SRGAP2-217ENST00000624873 MSNP26038 577 aaKnown RBP12.04□□□□□ -0.48
SRGAP2-217ENST00000624873 NOL7Q9UMY1 257 aaKnown RBP12.04□□□□□ -0.48
SRGAP2-217ENST00000624873 IQSEC3Q9UPP2 1182 aaPredicted RBP12.04□□□□□ -0.48
SRGAP2-217ENST00000624873 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
SRGAP2-217ENST00000624873 SEC63Q9UGP8 760 aaKnown RBP12.04□□□□□ -0.48
SRGAP2-217ENST00000624873 CLTCQ00610 1675 aaKnown RBP12.04□□□□□ -0.48
SRGAP2-217ENST00000624873 NAA16Q6N069 864 aaPredicted RBP12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 HCLS1P14317 486 aaPredicted RBP12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 PLCG2P16885 1265 aa12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 CYP7A1P22680 504 aa12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 ALDH1B1P30837 517 aa12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 SUPT20HQ8NEM7 779 aa12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 IL17REQ8NFR9 667 aa12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 F8W031 263 aaPredicted RBP12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 IGSF1Q8N6C5 1336 aa12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 CCDC96Q2M329 555 aa12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 CLTCL1P53675 1640 aa12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 ALKQ9UM73 1620 aa12.03□□□□□ -0.48
SRGAP2-217ENST00000624873 TPM3P06753 285 aa12.02□□□□□ -0.48
SRGAP2-217ENST00000624873 PDE6BP35913 854 aa12.02□□□□□ -0.48
SRGAP2-217ENST00000624873 PPP4R3BQ5MIZ7 849 aa12.02□□□□□ -0.48
SRGAP2-217ENST00000624873 PRPF40BQ6NWY9 871 aaKnown RBP12.02□□□□□ -0.48
SRGAP2-217ENST00000624873 ZNF76P36508 570 aa12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 WWC2Q6AWC2 1192 aa12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 TRIM35Q9UPQ4 493 aa12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 SETD1BQ9UPS6 1966 aaKnown RBP12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 PDIA4P13667 645 aaKnown RBP12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 STK38Q15208 465 aa12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 WDR78Q5VTH9 848 aa12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 SDF4Q9BRK5 362 aa12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 GIGYF1O75420 1035 aaPredicted RBP12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 HDAC1Q13547 482 aaPredicted RBP12.02□□□□□ -0.49
SRGAP2-217ENST00000624873 GOLGA6L3A6NEY3 463 aa12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 TMEM132AQ24JP5 1023 aa12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 GGA1Q9UJY5 639 aa12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 SPHKAPQ2M3C7 1700 aa12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 UFL1O94874 794 aa12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 CASTP20810 708 aaKnown RBP12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 TCIRG1Q13488 830 aa12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 TNS3Q68CZ2 1445 aa12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 SPATA31A6Q5VVP1 1343 aa12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 TSPY2A6NKD2 308 aa12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 ITGA6P23229 1130 aa12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 EIF6P56537 245 aaKnown RBP12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 DPP8Q6V1X1 898 aaPredicted RBP12.01□□□□□ -0.49
SRGAP2-217ENST00000624873 IFIT3O14879 490 aaKnown RBP12□□□□□ -0.49
SRGAP2-217ENST00000624873 KRT18P05783 430 aaKnown RBP12□□□□□ -0.49
SRGAP2-217ENST00000624873 INO80Q9ULG1 1556 aaPredicted RBP12□□□□□ -0.49
SRGAP2-217ENST00000624873 EYA2O00167 538 aa12□□□□□ -0.49
SRGAP2-217ENST00000624873 G2E3Q7L622 706 aa12□□□□□ -0.49
SRGAP2-217ENST00000624873 LARGE2Q8N3Y3 721 aa12□□□□□ -0.49
SRGAP2-217ENST00000624873 PA2G4Q9UQ80 394 aaKnown RBP12□□□□□ -0.49
SRGAP2-217ENST00000624873 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
SRGAP2-217ENST00000624873 LARP1BQ659C4 914 aaKnown RBP12□□□□□ -0.49
SRGAP2-217ENST00000624873 MFSD6Q6ZSS7 791 aa12□□□□□ -0.49
SRGAP2-217ENST00000624873 PCMTD1Q96MG8 357 aaPredicted RBP12□□□□□ -0.49
SRGAP2-217ENST00000624873 CEP152O94986 1710 aa12□□□□□ -0.49
SRGAP2-217ENST00000624873 CAMSAP1Q5T5Y3 1602 aa12□□□□□ -0.49
SRGAP2-217ENST00000624873 LDHBP07195 334 aaKnown RBP11.99□□□□□ -0.49
SRGAP2-217ENST00000624873 SASS6Q6UVJ0 657 aa11.99□□□□□ -0.49
SRGAP2-217ENST00000624873 BICC1Q9H694 974 aaKnown RBP11.99□□□□□ -0.49
SRGAP2-217ENST00000624873 VEZTQ9HBM0 779 aa11.99□□□□□ -0.49
SRGAP2-217ENST00000624873 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
SRGAP2-217ENST00000624873 TNNI2P48788 182 aa11.99□□□□□ -0.49
SRGAP2-217ENST00000624873 GPR162Q16538 588 aa11.99□□□□□ -0.49
SRGAP2-217ENST00000624873 CCDC178Q5BJE1 867 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms