RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 GCKRQ14397 625 aa10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 CLEC4GQ6UXB4 293 aa10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 PROM2Q8N271 834 aa10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 FLAD1Q8NFF5 587 aa10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 MEIS3Q99687 375 aa10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 USP44Q9H0E7 712 aa10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 RWDD1Q9H446 243 aaPredicted RBP10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 IGKV5-2P06315 115 aa10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 TRIM28Q13263 835 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 EZH2Q15910 746 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 B4GALNT3Q6L9W6 998 aa10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 RPAP2Q8IXW5 612 aaPredicted RBP10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 ARHGEF1Q92888 912 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 NARFQ9UHQ1 456 aa10.69□□□□□ -0.7
SOX9-AS1-217ENST00000623935 NUP98P52948 1817 aa10.68□□□□□ -0.7
SOX9-AS1-217ENST00000623935 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.68□□□□□ -0.7
SOX9-AS1-217ENST00000623935 HMMRO75330 724 aa10.68□□□□□ -0.7
SOX9-AS1-217ENST00000623935 CAMTA2O94983 1202 aa10.68□□□□□ -0.7
SOX9-AS1-217ENST00000623935 HLFQ16534 295 aa10.68□□□□□ -0.7
SOX9-AS1-217ENST00000623935 PARP10Q53GL7 1025 aa10.68□□□□□ -0.7
SOX9-AS1-217ENST00000623935 CAMKK2Q96RR4 588 aa10.68□□□□□ -0.7
SOX9-AS1-217ENST00000623935 ISCA1Q9BUE6 129 aa10.68□□□□□ -0.7
SOX9-AS1-217ENST00000623935 NBPF7P0C2Y1 421 aaPredicted RBP10.67□□□□□ -0.7
SOX9-AS1-217ENST00000623935 HSP90B1P14625 803 aaKnown RBP10.67□□□□□ -0.7
SOX9-AS1-217ENST00000623935 PPP1R42Q7Z4L9 355 aa10.67□□□□□ -0.7
SOX9-AS1-217ENST00000623935 C1orf115Q9H7X2 142 aa10.67□□□□□ -0.7
SOX9-AS1-217ENST00000623935 STK32BQ9NY57 414 aa10.67□□□□□ -0.7
SOX9-AS1-217ENST00000623935 ANKRD36CQ5JPF3 1778 aa10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 GPTP24298 496 aa10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 USPL1Q5W0Q7 1092 aa10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 CENPQQ7L2Z9 268 aaPredicted RBP10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 UBE3BQ7Z3V4 1068 aa10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 TRMT112Q9UI30 125 aaKnown RBP10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 NIP7Q9Y221 180 aaKnown RBP eCLIP10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 PCDHB15Q9Y5E8 787 aa10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 LRRFIP2Q9Y608 721 aaKnown RBP10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 UBR3Q6ZT12 1888 aa10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 UTYO14607 1347 aa10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 USP42Q9H9J4 1324 aaKnown RBP10.66□□□□□ -0.7
SOX9-AS1-217ENST00000623935 NPHP1O15259 732 aa10.65□□□□□ -0.7
SOX9-AS1-217ENST00000623935 NLRP10Q86W26 655 aa10.65□□□□□ -0.7
SOX9-AS1-217ENST00000623935 ZNF34Q8IZ26 560 aa10.65□□□□□ -0.7
SOX9-AS1-217ENST00000623935 ZBTB38Q8NAP3 1195 aaPredicted RBP10.65□□□□□ -0.7
SOX9-AS1-217ENST00000623935 AKT1S1Q96B36 256 aa10.65□□□□□ -0.7
SOX9-AS1-217ENST00000623935 SETDB2Q96T68 719 aa10.65□□□□□ -0.7
SOX9-AS1-217ENST00000623935 BCORQ6W2J9 1755 aa10.65□□□□□ -0.7
SOX9-AS1-217ENST00000623935 H7C1W4 665 aa10.65□□□□□ -0.71
SOX9-AS1-217ENST00000623935 PCCAP05165 728 aaPredicted RBP10.65□□□□□ -0.71
SOX9-AS1-217ENST00000623935 GTF2E1P29083 439 aaPredicted RBP10.65□□□□□ -0.71
SOX9-AS1-217ENST00000623935 HDAC1Q13547 482 aaPredicted RBP10.65□□□□□ -0.71
SOX9-AS1-217ENST00000623935 DEFB132Q7Z7B7 95 aa10.65□□□□□ -0.71
SOX9-AS1-217ENST00000623935 ANKRD44Q8N8A2 993 aa10.65□□□□□ -0.71
SOX9-AS1-217ENST00000623935 UTP14AQ9BVJ6 771 aaKnown RBP10.65□□□□□ -0.71
SOX9-AS1-217ENST00000623935 ZBTB47Q9UFB7 747 aaPredicted RBP10.65□□□□□ -0.71
SOX9-AS1-217ENST00000623935 SRP68Q9UHB9 627 aaKnown RBP10.65□□□□□ -0.71
SOX9-AS1-217ENST00000623935 SCN7AQ01118 1682 aa10.64□□□□□ -0.71
SOX9-AS1-217ENST00000623935 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
SOX9-AS1-217ENST00000623935 SLC15A2Q16348 729 aa10.64□□□□□ -0.71
SOX9-AS1-217ENST00000623935 ZNF827Q17R98 1081 aa10.64□□□□□ -0.71
SOX9-AS1-217ENST00000623935 LHX8Q68G74 356 aa10.64□□□□□ -0.71
SOX9-AS1-217ENST00000623935 CEP85Q6P2H3 762 aa10.64□□□□□ -0.71
SOX9-AS1-217ENST00000623935 BICDL1Q6ZP65 573 aa10.64□□□□□ -0.71
SOX9-AS1-217ENST00000623935 NYXQ9GZU5 481 aa10.64□□□□□ -0.71
SOX9-AS1-217ENST00000623935 C4AP0C0L4 1744 aa10.63□□□□□ -0.71
SOX9-AS1-217ENST00000623935 ATP8B2P98198 1209 aa10.63□□□□□ -0.71
SOX9-AS1-217ENST00000623935 RTL5Q5HYW3 569 aaPredicted RBP10.63□□□□□ -0.71
SOX9-AS1-217ENST00000623935 PAXIP1Q6ZW49 1069 aaPredicted RBP10.63□□□□□ -0.71
SOX9-AS1-217ENST00000623935 SMIM5Q71RC9 77 aa10.63□□□□□ -0.71
SOX9-AS1-217ENST00000623935 NLGN1Q8N2Q7 840 aa10.63□□□□□ -0.71
SOX9-AS1-217ENST00000623935 SUCLG2Q96I99 432 aa10.63□□□□□ -0.71
SOX9-AS1-217ENST00000623935 PODXL2Q9NZ53 605 aa10.63□□□□□ -0.71
SOX9-AS1-217ENST00000623935 SH3TC1Q8TE82 1336 aa10.63□□□□□ -0.71
SOX9-AS1-217ENST00000623935 FAM177BA6PVY3 158 aa10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 SRGAP3O43295 1099 aa10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 EVX2Q03828 476 aa10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 SUSD4Q5VX71 490 aa10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 TBC1D9BQ66K14 1250 aa10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 TPTE2Q6XPS3 522 aa10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 NBPF5PQ86XG9 351 aaPredicted RBP10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 GCC1Q96CN9 775 aa10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 FAM89AQ96GI7 184 aa10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 BICC1Q9H694 974 aaKnown RBP10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 UBN2Q6ZU65 1347 aa10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 CDHR2Q9BYE9 1310 aa10.62□□□□□ -0.71
SOX9-AS1-217ENST00000623935 CARMIL3Q8ND23 1372 aa10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 IRS4O14654 1257 aaPredicted RBP10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 IGHDP01880 384 aa10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 HSP90AB4PQ58FF6 505 aa10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 AMIGO3Q86WK7 504 aa10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 COL23A1Q86Y22 540 aaPredicted RBP10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 PELP1Q8IZL8 1130 aaKnown RBP10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 BBXQ8WY36 941 aaPredicted RBP10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 JARID2Q92833 1246 aaPredicted RBP10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 UPF1Q92900 1129 aaKnown RBP eCLIP10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 BCL2L12Q9HB09 334 aa10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 CHMP3Q9Y3E7 222 aa10.61□□□□□ -0.71
SOX9-AS1-217ENST00000623935 GYS1P13807 737 aa10.6□□□□□ -0.71
SOX9-AS1-217ENST00000623935 MTX1Q13505 466 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms