RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 CALML4Q96GE6 196 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 RPUSD2Q8IZ73 545 aaKnown RBP16.49■□□□□ 0.23
CDH23-214ENST00000622827 DHX29Q7Z478 1369 aaKnown RBP16.49■□□□□ 0.23
CDH23-214ENST00000622827 TCERG1LQ5VWI1 586 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 GTF3C6Q969F1 213 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 CCDC172P0C7W6 258 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 CATIPQ7Z7H3 387 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 CAPZA3Q96KX2 299 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 TTC12Q9H892 705 aaPredicted RBP16.49■□□□□ 0.23
CDH23-214ENST00000622827 BTBD11A6QL63 1104 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 CABP4P57796 275 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 AMPD3Q01432 767 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 CCDC77Q9BR77 488 aa16.49■□□□□ 0.23
CDH23-214ENST00000622827 TUBB4AP04350 444 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 SYKP43405 635 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 LRPPRCP42704 1394 aaKnown RBP16.48■□□□□ 0.23
CDH23-214ENST00000622827 STRN4Q9NRL3 753 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 KAT6AQ92794 2004 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 STMN2Q93045 179 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 CASKIN1Q8WXD9 1431 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 PABPN1LA6NDY0 278 aaKnown RBP16.48■□□□□ 0.23
CDH23-214ENST00000622827 CIB2O75838 187 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 HS1BP3Q53T59 392 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 PUF60Q9UHX1 559 aaKnown RBP16.48■□□□□ 0.23
CDH23-214ENST00000622827 TTC21AQ8NDW8 1320 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 ISM2Q6H9L7 571 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 BUB1BO60566 1050 aaPredicted RBP16.48■□□□□ 0.23
CDH23-214ENST00000622827 MAP7D1Q3KQU3 841 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 CCDC102BQ68D86 513 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 TRIM47Q96LD4 638 aa16.48■□□□□ 0.23
CDH23-214ENST00000622827 KRBA2Q6ZNG9 492 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 CYLC1P35663 651 aaPredicted RBP16.47■□□□□ 0.23
CDH23-214ENST00000622827 XRCC6P12956 609 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDH23-214ENST00000622827 KRT13P13646 458 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 IFT74Q96LB3 600 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 FAM200AQ8TCP9 573 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 TBC1D32Q96NH3 1257 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 CFTRP13569 1480 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 TCP11L1Q9NUJ3 509 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 MINDY4BA8MYZ0 360 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 TACC1O75410 805 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 GBP1P32455 592 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 MAP3K9P80192 1104 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 SLFN5Q08AF3 891 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 RMND1Q9NWS8 449 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 C9orf84Q5VXU9 1444 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 NSD3Q9BZ95 1437 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 SETDB1Q15047 1291 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 ZKSCAN5Q9Y2L8 839 aa16.47■□□□□ 0.23
CDH23-214ENST00000622827 PRPHP41219 470 aa16.46■□□□□ 0.23
CDH23-214ENST00000622827 RPAP2Q8IXW5 612 aaPredicted RBP16.46■□□□□ 0.23
CDH23-214ENST00000622827 SYCP3Q8IZU3 236 aa16.46■□□□□ 0.23
CDH23-214ENST00000622827 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
CDH23-214ENST00000622827 SYNCQ9H7C4 482 aa16.46■□□□□ 0.23
CDH23-214ENST00000622827 CUL5Q93034 780 aa16.46■□□□□ 0.23
CDH23-214ENST00000622827 TFIP11Q9UBB9 837 aaKnown RBP16.46■□□□□ 0.23
CDH23-214ENST00000622827 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.23
CDH23-214ENST00000622827 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
CDH23-214ENST00000622827 TPD52P55327 224 aaPredicted RBP16.46■□□□□ 0.23
CDH23-214ENST00000622827 KIAA1107Q9UPP5 1409 aa16.46■□□□□ 0.23
CDH23-214ENST00000622827 PANK2Q9BZ23 570 aa16.46■□□□□ 0.22
CDH23-214ENST00000622827 PRC1O43663 620 aa16.46■□□□□ 0.22
CDH23-214ENST00000622827 PHACTR2O75167 634 aa16.45■□□□□ 0.22
CDH23-214ENST00000622827 SSX2IPQ9Y2D8 614 aa16.45■□□□□ 0.22
CDH23-214ENST00000622827 PCK1P35558 622 aa16.45■□□□□ 0.22
CDH23-214ENST00000622827 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
CDH23-214ENST00000622827 PTPRGP23470 1445 aa16.45■□□□□ 0.22
CDH23-214ENST00000622827 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
CDH23-214ENST00000622827 DZIP1Q86YF9 867 aaKnown RBP16.45■□□□□ 0.22
CDH23-214ENST00000622827 CCDC50Q8IVM0 306 aa16.45■□□□□ 0.22
CDH23-214ENST00000622827 BOLA2Q9H3K6 86 aa16.45■□□□□ 0.22
CDH23-214ENST00000622827 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
CDH23-214ENST00000622827 ZSCAN29Q8IWY8 852 aaPredicted RBP16.45■□□□□ 0.22
CDH23-214ENST00000622827 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
CDH23-214ENST00000622827 AKAP2Q9Y2D5 859 aa16.44■□□□□ 0.22
CDH23-214ENST00000622827 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
CDH23-214ENST00000622827 PTGS1P23219 599 aa16.44■□□□□ 0.22
CDH23-214ENST00000622827 MKRN1Q9UHC7 482 aaKnown RBP16.44■□□□□ 0.22
CDH23-214ENST00000622827 EFCAB5A4FU69 1503 aa16.44■□□□□ 0.22
CDH23-214ENST00000622827 ARL1P40616 181 aaPredicted RBP16.44■□□□□ 0.22
CDH23-214ENST00000622827 CEP120Q8N960 986 aa16.44■□□□□ 0.22
CDH23-214ENST00000622827 PPM1FP49593 454 aaPredicted RBP16.44■□□□□ 0.22
CDH23-214ENST00000622827 C20orf194Q5TEA3 1177 aa16.44■□□□□ 0.22
CDH23-214ENST00000622827 STXBP4Q6ZWJ1 553 aa16.44■□□□□ 0.22
CDH23-214ENST00000622827 AFAP1L1Q8TED9 768 aa16.44■□□□□ 0.22
CDH23-214ENST00000622827 RANBP6O60518 1105 aaKnown RBP16.44■□□□□ 0.22
CDH23-214ENST00000622827 LMNTD2Q8IXW0 634 aa16.44■□□□□ 0.22
CDH23-214ENST00000622827 ZSCAN16Q9H4T2 348 aaPredicted RBP16.44■□□□□ 0.22
CDH23-214ENST00000622827 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
CDH23-214ENST00000622827 ATP2A1O14983 1001 aa16.43■□□□□ 0.22
CDH23-214ENST00000622827 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
CDH23-214ENST00000622827 EHMT1Q9H9B1 1298 aa16.43■□□□□ 0.22
CDH23-214ENST00000622827 CCDC63Q8NA47 563 aa16.43■□□□□ 0.22
CDH23-214ENST00000622827 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
CDH23-214ENST00000622827 RHOXF2BP0C7M4 288 aa16.43■□□□□ 0.22
CDH23-214ENST00000622827 RHOXF2Q9BQY4 288 aa16.43■□□□□ 0.22
CDH23-214ENST00000622827 SMIM23A6NLE4 172 aa16.43■□□□□ 0.22
CDH23-214ENST00000622827 TSNAXIP1Q2TAA8 658 aa16.43■□□□□ 0.22
CDH23-214ENST00000622827 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms