RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 NMIQ13287 307 aaPredicted RBP14.42□□□□□ -0.1
TP53-227ENST00000622645 JAKMIP1Q96N16 626 aaKnown RBP14.42□□□□□ -0.1
TP53-227ENST00000622645 TMEM63CQ9P1W3 806 aa14.42□□□□□ -0.1
TP53-227ENST00000622645 GDPD2Q9HCC8 539 aa14.42□□□□□ -0.1
TP53-227ENST00000622645 LIMCH1Q9UPQ0 1083 aa14.42□□□□□ -0.1
TP53-227ENST00000622645 PRIM1P49642 420 aaKnown RBP14.41□□□□□ -0.1
TP53-227ENST00000622645 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
TP53-227ENST00000622645 LARGE1O95461 756 aa14.41□□□□□ -0.1
TP53-227ENST00000622645 NECTIN1Q15223 517 aa14.41□□□□□ -0.1
TP53-227ENST00000622645 EDC3Q96F86 508 aaKnown RBP14.41□□□□□ -0.1
TP53-227ENST00000622645 A0A087WZG4 1122 aa14.4□□□□□ -0.1
TP53-227ENST00000622645 A0A0D9SFI3 127 aa14.4□□□□□ -0.1
TP53-227ENST00000622645 BRINP3Q76B58 766 aa14.4□□□□□ -0.1
TP53-227ENST00000622645 FSD1Q9BTV5 496 aa14.4□□□□□ -0.1
TP53-227ENST00000622645 RFX5P48382 616 aaPredicted RBP14.4□□□□□ -0.1
TP53-227ENST00000622645 PTPN12Q05209 780 aaKnown RBP14.4□□□□□ -0.1
TP53-227ENST00000622645 COPRSQ9NQ92 184 aa14.4□□□□□ -0.1
TP53-227ENST00000622645 PRDM11Q9NQV5 511 aa14.4□□□□□ -0.1
TP53-227ENST00000622645 RBM8AQ9Y5S9 174 aaKnown RBP14.4□□□□□ -0.1
TP53-227ENST00000622645 WDR33Q9C0J8 1336 aaKnown RBP14.4□□□□□ -0.1
TP53-227ENST00000622645 CPDO75976 1380 aa14.4□□□□□ -0.11
TP53-227ENST00000622645 RPAP1Q9BWH6 1393 aaPredicted RBP14.4□□□□□ -0.11
TP53-227ENST00000622645 KCNJ4P48050 445 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 COL9A3Q14050 684 aaPredicted RBP14.39□□□□□ -0.11
TP53-227ENST00000622645 TOM1L2Q6ZVM7 507 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 RBSNQ9H1K0 784 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 PDRG1Q9NUG6 133 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 MRC1P22897 1456 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 SYCE3A1L190 88 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 NBPF26B4DH59 902 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 TFCP2Q12800 502 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 NBPF14Q5TI25 921 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 NBPF10Q6P3W6 841 aaKnown RBP14.39□□□□□ -0.11
TP53-227ENST00000622645 NBPF15Q8N660 670 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 MAP4K1Q92918 833 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 ZSWIM6Q9HCJ5 1215 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 NDUFB9Q9Y6M9 179 aa14.39□□□□□ -0.11
TP53-227ENST00000622645 CREB3L3Q68CJ9 461 aa14.38□□□□□ -0.11
TP53-227ENST00000622645 KCNB2Q92953 911 aa14.38□□□□□ -0.11
TP53-227ENST00000622645 TRIM44Q96DX7 344 aaPredicted RBP14.38□□□□□ -0.11
TP53-227ENST00000622645 DBNLQ9UJU6 430 aaKnown RBP14.38□□□□□ -0.11
TP53-227ENST00000622645 CYP46A1Q9Y6A2 500 aa14.38□□□□□ -0.11
TP53-227ENST00000622645 ZKSCAN1P17029 563 aaPredicted RBP14.38□□□□□ -0.11
TP53-227ENST00000622645 PLBD2Q8NHP8 589 aa14.38□□□□□ -0.11
TP53-227ENST00000622645 ERBB4Q15303 1308 aa14.38□□□□□ -0.11
TP53-227ENST00000622645 HIP1O00291 1037 aa14.38□□□□□ -0.11
TP53-227ENST00000622645 GADD45BO75293 160 aaPredicted RBP14.38□□□□□ -0.11
TP53-227ENST00000622645 SYT1P21579 422 aa14.38□□□□□ -0.11
TP53-227ENST00000622645 RABL6Q3YEC7 729 aaPredicted RBP14.38□□□□□ -0.11
TP53-227ENST00000622645 VPS53Q5VIR6 699 aa14.38□□□□□ -0.11
TP53-227ENST00000622645 CCDC83Q8IWF9 413 aa14.38□□□□□ -0.11
TP53-227ENST00000622645 ZCRB1Q8TBF4 217 aaKnown RBP14.38□□□□□ -0.11
TP53-227ENST00000622645 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.38□□□□□ -0.11
TP53-227ENST00000622645 MBD3O95983 291 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 TNNI3KQ59H18 835 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 TM6SF1Q9BZW5 370 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 SMC3Q9UQE7 1217 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 FPGT-TNNI3KV9GXZ4 949 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 ABCC6O95255 1503 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 CASP7P55210 303 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 LMBR1LQ6UX01 489 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 TTLL7Q6ZT98 887 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 ZNF589Q86UQ0 364 aaPredicted RBP14.37□□□□□ -0.11
TP53-227ENST00000622645 USP48Q86UV5 1035 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 TAF6LQ9Y6J9 622 aa14.37□□□□□ -0.11
TP53-227ENST00000622645 WDR17Q8IZU2 1322 aa14.36□□□□□ -0.11
TP53-227ENST00000622645 ESPNB1AK53 854 aa14.36□□□□□ -0.11
TP53-227ENST00000622645 SLC27A2O14975 620 aa14.36□□□□□ -0.11
TP53-227ENST00000622645 STX6O43752 255 aa14.36□□□□□ -0.11
TP53-227ENST00000622645 A1BGP04217 495 aa14.36□□□□□ -0.11
TP53-227ENST00000622645 CHGBP05060 677 aa14.36□□□□□ -0.11
TP53-227ENST00000622645 ZSCAN22P10073 491 aaPredicted RBP14.36□□□□□ -0.11
TP53-227ENST00000622645 CCDC173Q0VFZ6 552 aa14.36□□□□□ -0.11
TP53-227ENST00000622645 ANP32BQ92688 251 aaKnown RBP14.36□□□□□ -0.11
TP53-227ENST00000622645 TCEANC2Q96MN5 208 aa14.36□□□□□ -0.11
TP53-227ENST00000622645 SNRKQ9NRH2 765 aa14.36□□□□□ -0.11
TP53-227ENST00000622645 CHMP3Q9Y3E7 222 aa14.36□□□□□ -0.11
TP53-227ENST00000622645 CCDC9Q9Y3X0 531 aaKnown RBP14.36□□□□□ -0.11
TP53-227ENST00000622645 ME3Q16798 604 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 TPRNQ4KMQ1 711 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 NECAB1Q8N987 351 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 PPP1R9BQ96SB3 815 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 DBNDD2Q9BQY9 259 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 PCDH11XQ9BZA7 1347 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 PCDH11YQ9BZA8 1340 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 PKD1L3Q7Z443 1732 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 ATP5JP18859 108 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 GJB2P29033 226 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 CLCN1P35523 988 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 ST3GAL1Q11201 340 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 TPCN1Q9ULQ1 816 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 CNPY2Q9Y2B0 182 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 PLEKHG2Q9H7P9 1386 aa14.35□□□□□ -0.11
TP53-227ENST00000622645 MED23Q9ULK4 1368 aa14.34□□□□□ -0.11
TP53-227ENST00000622645 FOXO4P98177 505 aa14.34□□□□□ -0.11
TP53-227ENST00000622645 DNAJC2Q99543 621 aaKnown RBP14.34□□□□□ -0.11
TP53-227ENST00000622645 ZBTB3Q9H5J0 574 aa14.34□□□□□ -0.11
TP53-227ENST00000622645 STRN4Q9NRL3 753 aa14.34□□□□□ -0.11
TP53-227ENST00000622645 H7C1W4 665 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms