RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 GPTP24298 496 aa15.84■□□□□ 0.13
AGAP3-226ENST00000622464 NMIQ13287 307 aaPredicted RBP15.84■□□□□ 0.13
AGAP3-226ENST00000622464 NUTM2AQ8IVF1 878 aaPredicted RBP15.84■□□□□ 0.13
AGAP3-226ENST00000622464 DBNDD2Q9BQY9 259 aa15.84■□□□□ 0.13
AGAP3-226ENST00000622464 FSD1Q9BTV5 496 aa15.84■□□□□ 0.13
AGAP3-226ENST00000622464 DBNLQ9UJU6 430 aaKnown RBP15.84■□□□□ 0.13
AGAP3-226ENST00000622464 TAF6LQ9Y6J9 622 aa15.84■□□□□ 0.13
AGAP3-226ENST00000622464 ADCK5Q3MIX3 580 aa15.83■□□□□ 0.13
AGAP3-226ENST00000622464 KIAA1211Q6ZU35 1233 aa15.83■□□□□ 0.13
AGAP3-226ENST00000622464 PANK2Q9BZ23 570 aa15.83■□□□□ 0.13
AGAP3-226ENST00000622464 SNX14Q9Y5W7 946 aa15.83■□□□□ 0.13
AGAP3-226ENST00000622464 AOX1Q06278 1338 aa15.83■□□□□ 0.13
AGAP3-226ENST00000622464 MRC1P22897 1456 aa15.83■□□□□ 0.12
AGAP3-226ENST00000622464 A0A0D9SFI3 127 aa15.83■□□□□ 0.12
AGAP3-226ENST00000622464 NCLP19338 710 aaKnown RBP15.83■□□□□ 0.12
AGAP3-226ENST00000622464 ZDHHC9Q9Y397 364 aa15.83■□□□□ 0.12
AGAP3-226ENST00000622464 GLI3P10071 1580 aa15.83■□□□□ 0.12
AGAP3-226ENST00000622464 BAG4O95429 457 aaKnown RBP15.83■□□□□ 0.12
AGAP3-226ENST00000622464 RFX5P48382 616 aaPredicted RBP15.83■□□□□ 0.12
AGAP3-226ENST00000622464 ERC1Q8IUD2 1116 aa15.83■□□□□ 0.12
AGAP3-226ENST00000622464 NEUROD6Q96NK8 337 aa15.83■□□□□ 0.12
AGAP3-226ENST00000622464 GBP4Q96PP9 640 aa15.83■□□□□ 0.12
AGAP3-226ENST00000622464 AFDNP55196 1824 aaKnown RBP15.82■□□□□ 0.12
AGAP3-226ENST00000622464 FAM43AQ8N2R8 423 aa15.82■□□□□ 0.12
AGAP3-226ENST00000622464 GPATCH3Q96I76 525 aa15.82■□□□□ 0.12
AGAP3-226ENST00000622464 CIZ1Q9ULV3 898 aaPredicted RBP15.82■□□□□ 0.12
AGAP3-226ENST00000622464 RAD50Q92878 1312 aa15.82■□□□□ 0.12
AGAP3-226ENST00000622464 HSPA4P34932 840 aa15.82■□□□□ 0.12
AGAP3-226ENST00000622464 TIMM10P62072 90 aa15.82■□□□□ 0.12
AGAP3-226ENST00000622464 LRRC24Q50LG9 513 aa15.82■□□□□ 0.12
AGAP3-226ENST00000622464 TTC41PQ6P2S7 1318 aa15.82■□□□□ 0.12
AGAP3-226ENST00000622464 ERVV-2B6SEH9 535 aa15.81■□□□□ 0.12
AGAP3-226ENST00000622464 KCNJ4P48050 445 aa15.81■□□□□ 0.12
AGAP3-226ENST00000622464 CCDC129Q6ZRS4 1044 aa15.81■□□□□ 0.12
AGAP3-226ENST00000622464 DDX46Q7L014 1031 aaKnown RBP15.81■□□□□ 0.12
AGAP3-226ENST00000622464 FAM89AQ96GI7 184 aa15.81■□□□□ 0.12
AGAP3-226ENST00000622464 SEC62Q99442 399 aaKnown RBP15.81■□□□□ 0.12
AGAP3-226ENST00000622464 PUS3Q9BZE2 481 aaKnown RBP15.81■□□□□ 0.12
AGAP3-226ENST00000622464 DDX11L8A8MPP1 907 aa15.81■□□□□ 0.12
AGAP3-226ENST00000622464 PIP4K2BP78356 416 aa15.81■□□□□ 0.12
AGAP3-226ENST00000622464 ACSBG1Q96GR2 724 aa15.81■□□□□ 0.12
AGAP3-226ENST00000622464 CASTP20810 708 aaKnown RBP15.81■□□□□ 0.12
AGAP3-226ENST00000622464 CASP7P55210 303 aa15.81■□□□□ 0.12
AGAP3-226ENST00000622464 ZNF589Q86UQ0 364 aaPredicted RBP15.81■□□□□ 0.12
AGAP3-226ENST00000622464 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
AGAP3-226ENST00000622464 FAM177BA6PVY3 158 aa15.8■□□□□ 0.12
AGAP3-226ENST00000622464 CWC25Q9NXE8 425 aaPredicted RBP15.8■□□□□ 0.12
AGAP3-226ENST00000622464 ARFGEF2Q9Y6D5 1785 aa15.8■□□□□ 0.12
AGAP3-226ENST00000622464 LARGE1O95461 756 aa15.8■□□□□ 0.12
AGAP3-226ENST00000622464 FOXO4P98177 505 aa15.8■□□□□ 0.12
AGAP3-226ENST00000622464 TNNI3KQ59H18 835 aa15.8■□□□□ 0.12
AGAP3-226ENST00000622464 FPGT-TNNI3KV9GXZ4 949 aa15.8■□□□□ 0.12
AGAP3-226ENST00000622464 JAKMIP1Q96N16 626 aaKnown RBP15.79■□□□□ 0.12
AGAP3-226ENST00000622464 SLC4A9Q96Q91 983 aa15.79■□□□□ 0.12
AGAP3-226ENST00000622464 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
AGAP3-226ENST00000622464 ABCA3Q99758 1704 aa15.79■□□□□ 0.12
AGAP3-226ENST00000622464 KCPQ6ZWJ8 1503 aa15.79■□□□□ 0.12
AGAP3-226ENST00000622464 USP42Q9H9J4 1324 aaKnown RBP15.79■□□□□ 0.12
AGAP3-226ENST00000622464 AK2P54819 239 aa15.79■□□□□ 0.12
AGAP3-226ENST00000622464 HLFQ16534 295 aa15.79■□□□□ 0.12
AGAP3-226ENST00000622464 ZMYND15Q9H091 742 aa15.79■□□□□ 0.12
AGAP3-226ENST00000622464 GDPD2Q9HCC8 539 aa15.79■□□□□ 0.12
AGAP3-226ENST00000622464 HDAC5Q9UQL6 1122 aa15.79■□□□□ 0.12
AGAP3-226ENST00000622464 EVI5LQ96CN4 794 aa15.78■□□□□ 0.12
AGAP3-226ENST00000622464 PARP4Q9UKK3 1724 aaKnown RBP15.78■□□□□ 0.12
AGAP3-226ENST00000622464 PRPF40AO75400 957 aaKnown RBP15.77■□□□□ 0.12
AGAP3-226ENST00000622464 NKX1-1Q15270 411 aaPredicted RBP15.77■□□□□ 0.12
AGAP3-226ENST00000622464 GAS2L3Q86XJ1 694 aa15.77■□□□□ 0.12
AGAP3-226ENST00000622464 COPRSQ9NQ92 184 aa15.77■□□□□ 0.12
AGAP3-226ENST00000622464 RBM8AQ9Y5S9 174 aaKnown RBP15.77■□□□□ 0.12
AGAP3-226ENST00000622464 DDX49Q9Y6V7 483 aaKnown RBP15.77■□□□□ 0.12
AGAP3-226ENST00000622464 TOGARAM1Q9Y4F4 1720 aa15.77■□□□□ 0.12
AGAP3-226ENST00000622464 PRIM1P49642 420 aaKnown RBP15.77■□□□□ 0.11
AGAP3-226ENST00000622464 TBC1D2BQ9UPU7 963 aa15.77■□□□□ 0.11
AGAP3-226ENST00000622464 SHANK3Q9BYB0 1731 aa15.77■□□□□ 0.11
AGAP3-226ENST00000622464 RBM27Q9P2N5 1060 aaKnown RBP15.77■□□□□ 0.11
AGAP3-226ENST00000622464 GOLGA6L3A6NEY3 463 aa15.76■□□□□ 0.11
AGAP3-226ENST00000622464 H7C1W4 665 aa15.76■□□□□ 0.11
AGAP3-226ENST00000622464 RABL6Q3YEC7 729 aaPredicted RBP15.76■□□□□ 0.11
AGAP3-226ENST00000622464 RUFY3Q7L099 469 aa15.76■□□□□ 0.11
AGAP3-226ENST00000622464 SNRKQ9NRH2 765 aa15.76■□□□□ 0.11
AGAP3-226ENST00000622464 ZBTB1Q9Y2K1 713 aa15.76■□□□□ 0.11
AGAP3-226ENST00000622464 XRCC6P12956 609 aaKnown RBP eCLIP15.76■□□□□ 0.116e-6■■■■■ 31.4
AGAP3-226ENST00000622464 NECAB1Q8N987 351 aa15.76■□□□□ 0.11
AGAP3-226ENST00000622464 CYP2E1P05181 493 aaPredicted RBP15.75■□□□□ 0.11
AGAP3-226ENST00000622464 NSFL1CQ9UNZ2 370 aaKnown RBP15.75■□□□□ 0.11
AGAP3-226ENST00000622464 CCDC171Q6TFL3 1326 aa15.75■□□□□ 0.11
AGAP3-226ENST00000622464 KCNQ4P56696 695 aa15.75■□□□□ 0.11
AGAP3-226ENST00000622464 ANAPC15P60006 121 aa15.75■□□□□ 0.11
AGAP3-226ENST00000622464 HSP90AB3PQ58FF7 597 aa15.75■□□□□ 0.11
AGAP3-226ENST00000622464 ATG9AQ7Z3C6 839 aa15.75■□□□□ 0.11
AGAP3-226ENST00000622464 GOLIM4O00461 696 aa15.74■□□□□ 0.11
AGAP3-226ENST00000622464 NUCB2P80303 420 aa15.74■□□□□ 0.11
AGAP3-226ENST00000622464 SMIM5Q71RC9 77 aa15.74■□□□□ 0.11
AGAP3-226ENST00000622464 CCDC83Q8IWF9 413 aa15.74■□□□□ 0.11
AGAP3-226ENST00000622464 RRAGDQ9NQL2 400 aaPredicted RBP15.74■□□□□ 0.11
AGAP3-226ENST00000622464 GLIPR1L2Q4G1C9 344 aa15.74■□□□□ 0.11
AGAP3-226ENST00000622464 CAVIN1Q6NZI2 390 aaKnown RBP15.74■□□□□ 0.11
AGAP3-226ENST00000622464 RUFY2Q8WXA3 655 aa15.74■□□□□ 0.11
AGAP3-226ENST00000622464 COL15A1P39059 1388 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms