RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 RBM17Q96I25 401 aaKnown RBP12.15□□□□□ -0.46
COL25A1-209ENST00000622134 PLEKHH1Q9ULM0 1364 aa12.15□□□□□ -0.46
COL25A1-209ENST00000622134 RXRBP28702 533 aa12.15□□□□□ -0.46
COL25A1-209ENST00000622134 TNNI2P48788 182 aa12.15□□□□□ -0.46
COL25A1-209ENST00000622134 C20orf194Q5TEA3 1177 aa12.15□□□□□ -0.46
COL25A1-209ENST00000622134 ZSCAN31Q96LW9 406 aaPredicted RBP12.15□□□□□ -0.46
COL25A1-209ENST00000622134 NKTRP30414 1462 aaKnown RBP12.15□□□□□ -0.47
COL25A1-209ENST00000622134 CT47A1Q5JQC4 288 aaPredicted RBP12.14□□□□□ -0.47
COL25A1-209ENST00000622134 PPP4R3AQ6IN85 833 aa12.14□□□□□ -0.47
COL25A1-209ENST00000622134 MIS18AQ9NYP9 233 aa12.14□□□□□ -0.47
COL25A1-209ENST00000622134 ARHGEF12Q9NZN5 1544 aa12.14□□□□□ -0.47
COL25A1-209ENST00000622134 PLEKHG1Q9ULL1 1385 aa12.14□□□□□ -0.47
COL25A1-209ENST00000622134 SNX21Q969T3 373 aa12.14□□□□□ -0.47
COL25A1-209ENST00000622134 PDILTQ8N807 584 aa12.14□□□□□ -0.47
COL25A1-209ENST00000622134 RASSF4Q9H2L5 321 aa12.14□□□□□ -0.47
COL25A1-209ENST00000622134 MAP3K2Q9Y2U5 619 aa12.14□□□□□ -0.47
COL25A1-209ENST00000622134 EDC4Q6P2E9 1401 aaKnown RBP12.14□□□□□ -0.47
COL25A1-209ENST00000622134 GOLGA6L7A0A1B0GV03 622 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 SHTN1A0MZ66 631 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 CBFA2T2O43439 604 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 CTCFLQ8NI51 663 aaPredicted RBP12.13□□□□□ -0.47
COL25A1-209ENST00000622134 NUP133Q8WUM0 1156 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 WDR78Q5VTH9 848 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 TTLL5Q6EMB2 1281 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 MYRIPQ8NFW9 859 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 C16orf45Q96MC5 204 aaPredicted RBP12.13□□□□□ -0.47
COL25A1-209ENST00000622134 SBNO1A3KN83 1393 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 GNPATO15228 680 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 POLR3GO15318 223 aaPredicted RBP12.13□□□□□ -0.47
COL25A1-209ENST00000622134 APBA3O96018 575 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 PDE4BQ07343 736 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 TMEM94Q12767 1356 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 PLEKHG3A1L390 1219 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 HMGB1P09429 215 aaKnown RBP12.13□□□□□ -0.47
COL25A1-209ENST00000622134 CRNKL1Q9BZJ0 848 aaKnown RBP12.13□□□□□ -0.47
COL25A1-209ENST00000622134 CFAP43Q8NDM7 1665 aa12.13□□□□□ -0.47
COL25A1-209ENST00000622134 HOXC9P31274 260 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 STIM1Q13586 685 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 CAGE1Q8TC20 777 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 BEGAINQ9BUH8 593 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 MAP3K5Q99683 1374 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 CEP57L1Q8IYX8 460 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 SMARCE1Q969G3 411 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 DNMT1P26358 1616 aaKnown RBP12.12□□□□□ -0.47
COL25A1-209ENST00000622134 CCDC171Q6TFL3 1326 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 DMTNQ08495 405 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 CNBD1Q8NA66 436 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 ZNF397Q8NF99 534 aaPredicted RBP12.12□□□□□ -0.47
COL25A1-209ENST00000622134 CCDC12Q8WUD4 166 aaPredicted RBP12.12□□□□□ -0.47
COL25A1-209ENST00000622134 THUMPD2Q9BTF0 503 aaKnown RBP12.12□□□□□ -0.47
COL25A1-209ENST00000622134 EIF4A2Q14240 407 aaKnown RBP12.12□□□□□ -0.47
COL25A1-209ENST00000622134 UBE3BQ7Z3V4 1068 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 C1orf115Q9H7X2 142 aa12.12□□□□□ -0.47
COL25A1-209ENST00000622134 IPO4Q8TEX9 1081 aaKnown RBP12.11□□□□□ -0.47
COL25A1-209ENST00000622134 ORAI2Q96SN7 254 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 KDM6BO15054 1643 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 ZFYP08048 801 aaPredicted RBP12.11□□□□□ -0.47
COL25A1-209ENST00000622134 FAM98CQ17RN3 349 aaKnown RBP12.11□□□□□ -0.47
COL25A1-209ENST00000622134 FAM196AQ6ZSG2 479 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 EFCAB6Q5THR3 1501 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 ASXL1Q8IXJ9 1541 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 CLGNO14967 610 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 ZSCAN12O43309 604 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 EIF6P56537 245 aaKnown RBP12.11□□□□□ -0.47
COL25A1-209ENST00000622134 CCDC96Q2M329 555 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 ARHGEF5Q12774 1597 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 STK38Q15208 465 aa12.11□□□□□ -0.47
COL25A1-209ENST00000622134 ABCA8O94911 1581 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 SAMD9Q5K651 1589 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 TUBB4AP04350 444 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 DESP17661 470 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 RAB3GAP1Q15042 981 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 CEP135Q66GS9 1140 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 KSR2Q6VAB6 950 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 KDM5DQ9BY66 1539 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 H0YIN7 160 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 CAVIN2O95810 425 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 XAGE3Q8WTP9 111 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 KIF5BP33176 963 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 GSDMDP57764 484 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 SMC5Q8IY18 1101 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
COL25A1-209ENST00000622134 CEP131Q9UPN4 1083 aa12.1□□□□□ -0.47
COL25A1-209ENST00000622134 HOXB7P09629 217 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 SFPQP23246 707 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL25A1-209ENST00000622134 MNAT1P51948 309 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 CERS3Q8IU89 383 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 MAST3O60307 1309 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 MINDY4BA8MYZ0 360 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 MCM3P25205 808 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 IL15P40933 162 aaPredicted RBP12.09□□□□□ -0.47
COL25A1-209ENST00000622134 SYCP1Q15431 976 aa12.09□□□□□ -0.47
COL25A1-209ENST00000622134 MAGEC2Q9UBF1 373 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms