RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 LAMB2P55268 1798 aa15.47■□□□□ 0.07
COL8A1-208ENST00000621757 SLX4Q8IY92 1834 aa15.46■□□□□ 0.07
COL8A1-208ENST00000621757 E9PSI1 815 aa15.46■□□□□ 0.07
COL8A1-208ENST00000621757 RIC3Q7Z5B4 369 aa15.46■□□□□ 0.07
COL8A1-208ENST00000621757 TTLL6Q8N841 843 aa15.46■□□□□ 0.07
COL8A1-208ENST00000621757 ZNF526Q8TF50 670 aaPredicted RBP15.46■□□□□ 0.07
COL8A1-208ENST00000621757 ZNF428Q96B54 188 aa15.46■□□□□ 0.07
COL8A1-208ENST00000621757 UTP14AQ9BVJ6 771 aaKnown RBP15.46■□□□□ 0.07
COL8A1-208ENST00000621757 DDX60Q8IY21 1712 aaKnown RBP15.46■□□□□ 0.06
COL8A1-208ENST00000621757 KLRG2A4D1S0 409 aaPredicted RBP15.45■□□□□ 0.06
COL8A1-208ENST00000621757 ATP5J2-PTCD1G3V325 749 aa15.45■□□□□ 0.06
COL8A1-208ENST00000621757 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
COL8A1-208ENST00000621757 STYK1Q6J9G0 422 aa15.45■□□□□ 0.06
COL8A1-208ENST00000621757 G2E3Q7L622 706 aa15.45■□□□□ 0.06
COL8A1-208ENST00000621757 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
COL8A1-208ENST00000621757 MASTLQ96GX5 879 aa15.45■□□□□ 0.06
COL8A1-208ENST00000621757 ISCA1Q9BUE6 129 aa15.45■□□□□ 0.06
COL8A1-208ENST00000621757 RNF123Q5XPI4 1314 aa15.44■□□□□ 0.06
COL8A1-208ENST00000621757 DDX58O95786 925 aaKnown RBP15.44■□□□□ 0.06
COL8A1-208ENST00000621757 SLFN5Q08AF3 891 aa15.44■□□□□ 0.06
COL8A1-208ENST00000621757 GPBP1L1Q9HC44 474 aaPredicted RBP15.44■□□□□ 0.06
COL8A1-208ENST00000621757 NPR1P16066 1061 aa15.43■□□□□ 0.06
COL8A1-208ENST00000621757 FLIIQ13045 1269 aa15.43■□□□□ 0.06
COL8A1-208ENST00000621757 CRY2Q49AN0 593 aa15.43■□□□□ 0.06
COL8A1-208ENST00000621757 PRPF40BQ6NWY9 871 aaKnown RBP15.43■□□□□ 0.06
COL8A1-208ENST00000621757 ARHGAP27Q6ZUM4 889 aa15.43■□□□□ 0.06
COL8A1-208ENST00000621757 C3orf67Q6ZVT6 689 aa15.43■□□□□ 0.06
COL8A1-208ENST00000621757 CNKSR1Q969H4 720 aa15.43■□□□□ 0.06
COL8A1-208ENST00000621757 MYD88Q99836 296 aa15.43■□□□□ 0.06
COL8A1-208ENST00000621757 TRMT112Q9UI30 125 aaKnown RBP15.43■□□□□ 0.06
COL8A1-208ENST00000621757 MAP3K2Q9Y2U5 619 aa15.43■□□□□ 0.06
COL8A1-208ENST00000621757 SH3TC1Q8TE82 1336 aa15.43■□□□□ 0.06
COL8A1-208ENST00000621757 PI4KAP2A4QPH2 592 aa15.42■□□□□ 0.06
COL8A1-208ENST00000621757 KSR2Q6VAB6 950 aa15.42■□□□□ 0.06
COL8A1-208ENST00000621757 SYNE4Q8N205 404 aa15.42■□□□□ 0.06
COL8A1-208ENST00000621757 PI4KAP1Q8N8J0 262 aa15.42■□□□□ 0.06
COL8A1-208ENST00000621757 METTL22Q9BUU2 404 aaPredicted RBP15.42■□□□□ 0.06
COL8A1-208ENST00000621757 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
COL8A1-208ENST00000621757 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
COL8A1-208ENST00000621757 SBF1O95248 1867 aa15.4■□□□□ 0.06
COL8A1-208ENST00000621757 C21orf2O43822 256 aa15.4■□□□□ 0.06
COL8A1-208ENST00000621757 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
COL8A1-208ENST00000621757 RASSF7Q02833 373 aa15.4■□□□□ 0.06
COL8A1-208ENST00000621757 TRIM28Q13263 835 aaKnown RBP15.4■□□□□ 0.06
COL8A1-208ENST00000621757 FKBP5Q13451 457 aaPredicted RBP15.4■□□□□ 0.06
COL8A1-208ENST00000621757 SLC10A5Q5PT55 438 aa15.4■□□□□ 0.06
COL8A1-208ENST00000621757 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
COL8A1-208ENST00000621757 HNRNPUQ00839 825 aaKnown RBP eCLIP15.39■□□□□ 0.05
COL8A1-208ENST00000621757 TRMT2AQ8IZ69 625 aaKnown RBP15.39■□□□□ 0.05
COL8A1-208ENST00000621757 FAM89AQ96GI7 184 aa15.39■□□□□ 0.05
COL8A1-208ENST00000621757 NLRP3Q96P20 1036 aa15.39■□□□□ 0.05
COL8A1-208ENST00000621757 CEP350Q5VT06 3117 aa15.39■□□□□ 0.05
COL8A1-208ENST00000621757 TIAM2Q8IVF5 1701 aa15.38■□□□□ 0.05
COL8A1-208ENST00000621757 NFKBIEO00221 500 aa15.38■□□□□ 0.05
COL8A1-208ENST00000621757 IGKV5-2P06315 115 aa15.38■□□□□ 0.05
COL8A1-208ENST00000621757 RTL5Q5HYW3 569 aaPredicted RBP15.38■□□□□ 0.05
COL8A1-208ENST00000621757 CCDC191Q8NCU4 936 aa15.38■□□□□ 0.05
COL8A1-208ENST00000621757 CWC25Q9NXE8 425 aaPredicted RBP15.38■□□□□ 0.05
COL8A1-208ENST00000621757 ALDH1B1P30837 517 aa15.37■□□□□ 0.05
COL8A1-208ENST00000621757 HOXA10P31260 410 aaPredicted RBP15.37■□□□□ 0.05
COL8A1-208ENST00000621757 NEXNQ0ZGT2 675 aa15.37■□□□□ 0.05
COL8A1-208ENST00000621757 CWF19L2Q2TBE0 894 aaKnown RBP15.37■□□□□ 0.05
COL8A1-208ENST00000621757 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
COL8A1-208ENST00000621757 DNAAF4Q8WXU2 420 aa15.37■□□□□ 0.05
COL8A1-208ENST00000621757 RBM17Q96I25 401 aaKnown RBP15.37■□□□□ 0.05
COL8A1-208ENST00000621757 CCDC88AQ3V6T2 1871 aa15.36■□□□□ 0.05
COL8A1-208ENST00000621757 IRS4O14654 1257 aaPredicted RBP15.36■□□□□ 0.05
COL8A1-208ENST00000621757 KIF3CO14782 793 aa15.36■□□□□ 0.05
COL8A1-208ENST00000621757 HSPA6P17066 643 aa15.36■□□□□ 0.05
COL8A1-208ENST00000621757 PRELPP51888 382 aa15.36■□□□□ 0.05
COL8A1-208ENST00000621757 SOGA3Q5TF21 947 aa15.36■□□□□ 0.05
COL8A1-208ENST00000621757 C9orf131Q5VYM1 1079 aa15.36■□□□□ 0.05
COL8A1-208ENST00000621757 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
COL8A1-208ENST00000621757 C7orf43Q8WVR3 580 aa15.36■□□□□ 0.05
COL8A1-208ENST00000621757 ABCC4O15439 1325 aa15.36■□□□□ 0.05
COL8A1-208ENST00000621757 TAF1P21675 1872 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 SNED1Q8TER0 1413 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 COL4A1P02462 1669 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 NEURL1BA8MQ27 555 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 F6X3S4 739 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 PCCAP05165 728 aaPredicted RBP15.35■□□□□ 0.05
COL8A1-208ENST00000621757 CCDC93Q567U6 631 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 SLC51AQ86UW1 340 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 SSH1Q8WYL5 1049 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 JARID2Q92833 1246 aaPredicted RBP15.35■□□□□ 0.05
COL8A1-208ENST00000621757 CRAMP1Q96RY5 1269 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 BCL2L13Q9BXK5 485 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 RNF181Q9P0P0 153 aa15.35■□□□□ 0.05
COL8A1-208ENST00000621757 PPEF1O14829 653 aaPredicted RBP15.34■□□□□ 0.05
COL8A1-208ENST00000621757 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
COL8A1-208ENST00000621757 TAOK3Q9H2K8 898 aa15.34■□□□□ 0.05
COL8A1-208ENST00000621757 MYH3P11055 1940 aa15.34■□□□□ 0.05
COL8A1-208ENST00000621757 DICER1Q9UPY3 1922 aaKnown RBP15.33■□□□□ 0.05
COL8A1-208ENST00000621757 LMNB1P20700 586 aa15.33■□□□□ 0.04
COL8A1-208ENST00000621757 LINS1Q8NG48 757 aa15.33■□□□□ 0.04
COL8A1-208ENST00000621757 LRRC37AA6NMS7 1700 aa15.33■□□□□ 0.04
COL8A1-208ENST00000621757 CDHR2Q9BYE9 1310 aa15.33■□□□□ 0.04
COL8A1-208ENST00000621757 LTBP3Q9NS15 1303 aa15.33■□□□□ 0.04
COL8A1-208ENST00000621757 CT47B1P0C2W7 299 aaPredicted RBP15.32■□□□□ 0.04
COL8A1-208ENST00000621757 GCKRQ14397 625 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms