RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 DICER1Q9UPY3 1922 aaKnown RBP25.55■■□□□ 1.68
PTBP1-219ENST00000621737 ALDH1B1P30837 517 aa25.54■■□□□ 1.68
PTBP1-219ENST00000621737 CCDC27Q2M243 656 aa25.54■■□□□ 1.68
PTBP1-219ENST00000621737 CCDC93Q567U6 631 aa25.53■■□□□ 1.68
PTBP1-219ENST00000621737 HYPKQ9NX55 129 aa25.53■■□□□ 1.68
PTBP1-219ENST00000621737 UTP14AQ9BVJ6 771 aaKnown RBP25.52■■□□□ 1.68
PTBP1-219ENST00000621737 NLRP10Q86W26 655 aa25.51■■□□□ 1.67
PTBP1-219ENST00000621737 PLBD2Q8NHP8 589 aa25.51■■□□□ 1.67
PTBP1-219ENST00000621737 RPGRQ92834 1020 aaKnown RBP25.51■■□□□ 1.67
PTBP1-219ENST00000621737 TOMM70O94826 608 aa25.5■■□□□ 1.67
PTBP1-219ENST00000621737 HOXA10P31260 410 aaPredicted RBP25.5■■□□□ 1.67
PTBP1-219ENST00000621737 TCIRG1Q13488 830 aa25.5■■□□□ 1.67
PTBP1-219ENST00000621737 NCBP3Q53F19 620 aaKnown RBP25.5■■□□□ 1.67
PTBP1-219ENST00000621737 WWC1Q8IX03 1113 aa25.49■■□□□ 1.67
PTBP1-219ENST00000621737 GLTPD2A6NH11 291 aa25.48■■□□□ 1.67
PTBP1-219ENST00000621737 SLC10A5Q5PT55 438 aa25.48■■□□□ 1.67
PTBP1-219ENST00000621737 ANKRD13DQ6ZTN6 518 aa25.48■■□□□ 1.67
PTBP1-219ENST00000621737 C8orf58Q8NAV2 365 aa25.48■■□□□ 1.67
PTBP1-219ENST00000621737 ELL2O00472 640 aaPredicted RBP25.47■■□□□ 1.67
PTBP1-219ENST00000621737 RTKN2Q8IZC4 609 aa25.47■■□□□ 1.67
PTBP1-219ENST00000621737 NLRP3Q96P20 1036 aa25.47■■□□□ 1.67
PTBP1-219ENST00000621737 SNED1Q8TER0 1413 aa25.46■■□□□ 1.67
PTBP1-219ENST00000621737 FKBP4Q02790 459 aaKnown RBP eCLIP25.46■■□□□ 1.67
PTBP1-219ENST00000621737 OLFM4Q6UX06 510 aa25.46■■□□□ 1.67
PTBP1-219ENST00000621737 C3orf67Q6ZVT6 689 aa25.46■■□□□ 1.67
PTBP1-219ENST00000621737 C16orf71Q8IYS4 520 aaPredicted RBP25.46■■□□□ 1.67
PTBP1-219ENST00000621737 RBM17Q96I25 401 aaKnown RBP25.46■■□□□ 1.67
PTBP1-219ENST00000621737 CRAMP1Q96RY5 1269 aa25.46■■□□□ 1.67
PTBP1-219ENST00000621737 CHMP4AQ9BY43 222 aa25.46■■□□□ 1.67
PTBP1-219ENST00000621737 RRAGCQ9HB90 399 aa25.46■■□□□ 1.67
PTBP1-219ENST00000621737 LAMB2P55268 1798 aa25.46■■□□□ 1.67
PTBP1-219ENST00000621737 IL16Q14005 1332 aa25.45■■□□□ 1.66
PTBP1-219ENST00000621737 SH3TC1Q8TE82 1336 aa25.44■■□□□ 1.66
PTBP1-219ENST00000621737 HSPA6P17066 643 aa25.44■■□□□ 1.66
PTBP1-219ENST00000621737 RBM46Q8TBY0 533 aaKnown RBP25.44■■□□□ 1.66
PTBP1-219ENST00000621737 TSR2Q969E8 191 aaKnown RBP25.44■■□□□ 1.66
PTBP1-219ENST00000621737 TRMT112Q9UI30 125 aaKnown RBP25.44■■□□□ 1.66
PTBP1-219ENST00000621737 CEP350Q5VT06 3117 aa25.43■■□□□ 1.66
PTBP1-219ENST00000621737 WDR90Q96KV7 1748 aa25.43■■□□□ 1.66
PTBP1-219ENST00000621737 GOLGA2Q08379 1002 aa25.43■■□□□ 1.66
PTBP1-219ENST00000621737 CC2D2BQ6DHV5 1058 aa25.43■■□□□ 1.66
PTBP1-219ENST00000621737 DPY19L2Q6NUT2 758 aa25.43■■□□□ 1.66
PTBP1-219ENST00000621737 ISCA1Q9BUE6 129 aa25.43■■□□□ 1.66
PTBP1-219ENST00000621737 CCDC30Q5VVM6 783 aa25.42■■□□□ 1.66
PTBP1-219ENST00000621737 DDX60Q8IY21 1712 aaKnown RBP25.41■■□□□ 1.66
PTBP1-219ENST00000621737 PPEF1O14829 653 aaPredicted RBP25.41■■□□□ 1.66
PTBP1-219ENST00000621737 PSMD1Q99460 953 aa25.41■■□□□ 1.66
PTBP1-219ENST00000621737 PHAXQ9H814 394 aaKnown RBP25.41■■□□□ 1.66
PTBP1-219ENST00000621737 ZNF277Q9NRM2 450 aaPredicted RBP25.41■■□□□ 1.66
PTBP1-219ENST00000621737 HCLS1P14317 486 aaPredicted RBP25.4■■□□□ 1.66
PTBP1-219ENST00000621737 VEGFAP15692 232 aaPredicted RBP25.4■■□□□ 1.66
PTBP1-219ENST00000621737 GRIPAP1Q4V328 841 aa25.4■■□□□ 1.66
PTBP1-219ENST00000621737 SYNE4Q8N205 404 aa25.4■■□□□ 1.66
PTBP1-219ENST00000621737 TSPYL6Q8N831 410 aa25.4■■□□□ 1.66
PTBP1-219ENST00000621737 TRIM28Q13263 835 aaKnown RBP25.39■■□□□ 1.66
PTBP1-219ENST00000621737 RIC3Q7Z5B4 369 aa25.39■■□□□ 1.66
PTBP1-219ENST00000621737 ABCC4O15439 1325 aa25.38■■□□□ 1.65
PTBP1-219ENST00000621737 ATP5J2-PTCD1G3V325 749 aa25.38■■□□□ 1.65
PTBP1-219ENST00000621737 IARSP41252 1262 aaKnown RBP25.37■■□□□ 1.65
PTBP1-219ENST00000621737 FSTL1Q12841 308 aa25.37■■□□□ 1.65
PTBP1-219ENST00000621737 TWISTNBQ3B726 338 aaPredicted RBP25.36■■□□□ 1.65
PTBP1-219ENST00000621737 WDR63Q8IWG1 891 aa25.36■■□□□ 1.65
PTBP1-219ENST00000621737 FAM9BQ8IZU0 186 aa25.36■■□□□ 1.65
PTBP1-219ENST00000621737 FANCIQ9NVI1 1328 aa25.36■■□□□ 1.65
PTBP1-219ENST00000621737 DDX58O95786 925 aaKnown RBP25.35■■□□□ 1.65
PTBP1-219ENST00000621737 ZNF428Q96B54 188 aa25.35■■□□□ 1.65
PTBP1-219ENST00000621737 FAM89AQ96GI7 184 aa25.35■■□□□ 1.65
PTBP1-219ENST00000621737 POTECB2RU33 542 aa25.34■■□□□ 1.65
PTBP1-219ENST00000621737 DDX46Q7L014 1031 aaKnown RBP25.34■■□□□ 1.65
PTBP1-219ENST00000621737 SLC51AQ86UW1 340 aa25.34■■□□□ 1.65
PTBP1-219ENST00000621737 STK31Q9BXU1 1019 aa25.34■■□□□ 1.65
PTBP1-219ENST00000621737 TMX4Q9H1E5 349 aaPredicted RBP25.34■■□□□ 1.65
PTBP1-219ENST00000621737 SALL2Q9Y467 1007 aaPredicted RBP25.34■■□□□ 1.65
PTBP1-219ENST00000621737 ATP6V0A2Q9Y487 856 aa25.34■■□□□ 1.65
PTBP1-219ENST00000621737 TCERG1O14776 1098 aaKnown RBP25.33■■□□□ 1.65
PTBP1-219ENST00000621737 BBOX1O75936 387 aa25.33■■□□□ 1.65
PTBP1-219ENST00000621737 DDNO94850 711 aaPredicted RBP25.33■■□□□ 1.65
PTBP1-219ENST00000621737 SMC1BQ8NDV3 1235 aa25.33■■□□□ 1.65
PTBP1-219ENST00000621737 APLP1P51693 650 aa25.32■■□□□ 1.64
PTBP1-219ENST00000621737 MYD88Q99836 296 aa25.32■■□□□ 1.64
PTBP1-219ENST00000621737 ZNF541Q9H0D2 1346 aa25.32■■□□□ 1.64
PTBP1-219ENST00000621737 GRAPQ13588 217 aa25.31■■□□□ 1.64
PTBP1-219ENST00000621737 GRAPLQ8TC17 118 aaPredicted RBP25.31■■□□□ 1.64
PTBP1-219ENST00000621737 L3MBTL3Q96JM7 780 aaPredicted RBP25.31■■□□□ 1.64
PTBP1-219ENST00000621737 METTL22Q9BUU2 404 aaPredicted RBP25.31■■□□□ 1.64
PTBP1-219ENST00000621737 COL4A5P29400 1685 aa25.31■■□□□ 1.64
PTBP1-219ENST00000621737 LRRC37AA6NMS7 1700 aa25.31■■□□□ 1.64
PTBP1-219ENST00000621737 FZD9O00144 591 aa25.3■■□□□ 1.64
PTBP1-219ENST00000621737 SF3B3Q15393 1217 aaKnown RBP25.3■■□□□ 1.64
PTBP1-219ENST00000621737 ZBTB38Q8NAP3 1195 aaPredicted RBP25.3■■□□□ 1.64
PTBP1-219ENST00000621737 CCDC191Q8NCU4 936 aa25.3■■□□□ 1.64
PTBP1-219ENST00000621737 JDP2Q8WYK2 163 aa25.3■■□□□ 1.64
PTBP1-219ENST00000621737 SCN4AP35499 1836 aa25.3■■□□□ 1.64
PTBP1-219ENST00000621737 IRS4O14654 1257 aaPredicted RBP25.29■■□□□ 1.64
PTBP1-219ENST00000621737 RTL5Q5HYW3 569 aaPredicted RBP25.29■■□□□ 1.64
PTBP1-219ENST00000621737 KSR2Q6VAB6 950 aa25.29■■□□□ 1.64
PTBP1-219ENST00000621737 SP8Q8IXZ3 490 aa25.29■■□□□ 1.64
PTBP1-219ENST00000621737 MAP3K2Q9Y2U5 619 aa25.29■■□□□ 1.64
PTBP1-219ENST00000621737 TAF1P21675 1872 aa25.29■■□□□ 1.64
PTBP1-219ENST00000621737 IQCA1LA6NCM1 817 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms