RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 SKIP12755 728 aa11.48□□□□□ -0.57
TARDBP-224ENST00000621573 NBPF8Q3BBV2 869 aa11.48□□□□□ -0.57
TARDBP-224ENST00000621573 TRAF7Q6Q0C0 670 aa11.48□□□□□ -0.57
TARDBP-224ENST00000621573 PRAM1Q96QH2 718 aa11.48□□□□□ -0.57
TARDBP-224ENST00000621573 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
TARDBP-224ENST00000621573 PTCH1Q13635 1447 aa11.47□□□□□ -0.57
TARDBP-224ENST00000621573 SCTRP47872 440 aa11.47□□□□□ -0.57
TARDBP-224ENST00000621573 ERVK-9P63128 1117 aa11.47□□□□□ -0.57
TARDBP-224ENST00000621573 CBLBQ13191 982 aa11.47□□□□□ -0.57
TARDBP-224ENST00000621573 MAP7D1Q3KQU3 841 aa11.47□□□□□ -0.57
TARDBP-224ENST00000621573 SIRT1Q96EB6 747 aa11.47□□□□□ -0.57
TARDBP-224ENST00000621573 ROCK2O75116 1388 aaKnown RBP11.46□□□□□ -0.57
TARDBP-224ENST00000621573 ADD1P35611 737 aaKnown RBP11.46□□□□□ -0.57
TARDBP-224ENST00000621573 C1orf115Q9H7X2 142 aa11.46□□□□□ -0.57
TARDBP-224ENST00000621573 ASXL1Q8IXJ9 1541 aa11.45□□□□□ -0.58
TARDBP-224ENST00000621573 PLEKHH1Q9ULM0 1364 aa11.45□□□□□ -0.58
TARDBP-224ENST00000621573 ATP9BO43861 1147 aa11.45□□□□□ -0.58
TARDBP-224ENST00000621573 OXLD1Q5BKU9 147 aa11.45□□□□□ -0.58
TARDBP-224ENST00000621573 CC2D2BQ6DHV5 1058 aa11.45□□□□□ -0.58
TARDBP-224ENST00000621573 Q6ZVU0 165 aa11.45□□□□□ -0.58
TARDBP-224ENST00000621573 PPP1R12CQ9BZL4 782 aa11.45□□□□□ -0.58
TARDBP-224ENST00000621573 SLAIN2Q9P270 581 aa11.45□□□□□ -0.58
TARDBP-224ENST00000621573 TFIP11Q9UBB9 837 aaKnown RBP11.45□□□□□ -0.58
TARDBP-224ENST00000621573 TECPR2O15040 1411 aa11.44□□□□□ -0.58
TARDBP-224ENST00000621573 SETD1AO15047 1707 aaKnown RBP11.44□□□□□ -0.58
TARDBP-224ENST00000621573 XRN1Q8IZH2 1706 aaKnown RBP11.44□□□□□ -0.58
TARDBP-224ENST00000621573 PALM3A6NDB9 673 aaPredicted RBP11.44□□□□□ -0.58
TARDBP-224ENST00000621573 CARD11Q9BXL7 1154 aa11.44□□□□□ -0.58
TARDBP-224ENST00000621573 DACH1Q9UI36 760 aa11.44□□□□□ -0.58
TARDBP-224ENST00000621573 LAMC1P11047 1609 aa11.44□□□□□ -0.58
TARDBP-224ENST00000621573 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
TARDBP-224ENST00000621573 ADGRL3Q9HAR2 1447 aa11.43□□□□□ -0.58
TARDBP-224ENST00000621573 ADGRB1O14514 1584 aa11.43□□□□□ -0.58
TARDBP-224ENST00000621573 USP17L5A8MUK1 530 aa11.43□□□□□ -0.58
TARDBP-224ENST00000621573 DEPDC4Q8N2C3 294 aa11.43□□□□□ -0.58
TARDBP-224ENST00000621573 MEIOBQ8N635 442 aa11.43□□□□□ -0.58
TARDBP-224ENST00000621573 BMP1P13497 986 aa11.42□□□□□ -0.58
TARDBP-224ENST00000621573 USP4Q13107 963 aa11.42□□□□□ -0.58
TARDBP-224ENST00000621573 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
TARDBP-224ENST00000621573 NCOA4Q13772 614 aa11.41□□□□□ -0.58
TARDBP-224ENST00000621573 TRIM46Q7Z4K8 759 aa11.41□□□□□ -0.58
TARDBP-224ENST00000621573 OSBPL3Q9H4L5 887 aa11.41□□□□□ -0.58
TARDBP-224ENST00000621573 MAFBQ9Y5Q3 323 aaPredicted RBP11.41□□□□□ -0.58
TARDBP-224ENST00000621573 USP17L3A6NCW0 530 aa11.4□□□□□ -0.58
TARDBP-224ENST00000621573 USP17L4A6NCW7 530 aa11.4□□□□□ -0.58
TARDBP-224ENST00000621573 LZTS3O60299 673 aaPredicted RBP11.4□□□□□ -0.58
TARDBP-224ENST00000621573 MYCP01106 439 aaPredicted RBP11.4□□□□□ -0.58
TARDBP-224ENST00000621573 ADH1AP07327 375 aa11.4□□□□□ -0.58
TARDBP-224ENST00000621573 USP17L2Q6R6M4 530 aa11.4□□□□□ -0.58
TARDBP-224ENST00000621573 USP17L1Q7RTZ2 530 aa11.4□□□□□ -0.58
TARDBP-224ENST00000621573 PLEKHM2Q8IWE5 1019 aa11.4□□□□□ -0.58
TARDBP-224ENST00000621573 KDF1Q8NAX2 398 aaPredicted RBP11.4□□□□□ -0.58
TARDBP-224ENST00000621573 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.58
TARDBP-224ENST00000621573 DCCP43146 1447 aa11.4□□□□□ -0.58
TARDBP-224ENST00000621573 DLC1Q96QB1 1528 aa11.4□□□□□ -0.59
TARDBP-224ENST00000621573 CENPJQ9HC77 1338 aaPredicted RBP11.39□□□□□ -0.59
TARDBP-224ENST00000621573 EML3Q32P44 896 aa11.39□□□□□ -0.59
TARDBP-224ENST00000621573 MRPL14Q6P1L8 145 aaKnown RBP11.39□□□□□ -0.59
TARDBP-224ENST00000621573 ATP13A2Q9NQ11 1180 aa11.39□□□□□ -0.59
TARDBP-224ENST00000621573 XIRP1Q702N8 1843 aaKnown RBP11.38□□□□□ -0.59
TARDBP-224ENST00000621573 LMOD1P29536 600 aaPredicted RBP11.38□□□□□ -0.59
TARDBP-224ENST00000621573 HSPA1LP34931 641 aa11.38□□□□□ -0.59
TARDBP-224ENST00000621573 ESCO1Q5FWF5 840 aa11.38□□□□□ -0.59
TARDBP-224ENST00000621573 LINC00528Q8N1L1 170 aa11.38□□□□□ -0.59
TARDBP-224ENST00000621573 CCDC82Q8N4S0 544 aa11.38□□□□□ -0.59
TARDBP-224ENST00000621573 CCDC97Q96F63 343 aaPredicted RBP11.38□□□□□ -0.59
TARDBP-224ENST00000621573 EIF3AQ14152 1382 aaKnown RBP11.38□□□□□ -0.59
TARDBP-224ENST00000621573 GPRASP1Q5JY77 1395 aa11.38□□□□□ -0.59
TARDBP-224ENST00000621573 WASLO00401 505 aaPredicted RBP11.37□□□□□ -0.59
TARDBP-224ENST00000621573 RELBQ01201 579 aa11.37□□□□□ -0.59
TARDBP-224ENST00000621573 BRINP3Q76B58 766 aa11.37□□□□□ -0.59
TARDBP-224ENST00000621573 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
TARDBP-224ENST00000621573 TSEN34Q9BSV6 310 aaKnown RBP11.37□□□□□ -0.59
TARDBP-224ENST00000621573 SERPINA10Q9UK55 444 aa11.37□□□□□ -0.59
TARDBP-224ENST00000621573 KIAA1210Q9ULL0 1709 aa11.37□□□□□ -0.59
TARDBP-224ENST00000621573 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
TARDBP-224ENST00000621573 MST1RQ04912 1400 aa11.36□□□□□ -0.59
TARDBP-224ENST00000621573 KNDC1Q76NI1 1749 aa11.36□□□□□ -0.59
TARDBP-224ENST00000621573 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.36□□□□□ -0.59
TARDBP-224ENST00000621573 ATP5J2-PTCD1G3V325 749 aa11.36□□□□□ -0.59
TARDBP-224ENST00000621573 CYP2U1Q7Z449 544 aa11.36□□□□□ -0.59
TARDBP-224ENST00000621573 CDK19Q9BWU1 502 aa11.36□□□□□ -0.59
TARDBP-224ENST00000621573 NOD1Q9Y239 953 aa11.36□□□□□ -0.59
TARDBP-224ENST00000621573 C1orf167Q5SNV9 1468 aa11.36□□□□□ -0.59
TARDBP-224ENST00000621573 UPP2O95045 317 aa11.35□□□□□ -0.59
TARDBP-224ENST00000621573 PTGIRP43119 386 aa11.35□□□□□ -0.59
TARDBP-224ENST00000621573 SRPK2P78362 688 aaKnown RBP11.35□□□□□ -0.59
TARDBP-224ENST00000621573 C6orf118Q5T5N4 469 aa11.35□□□□□ -0.59
TARDBP-224ENST00000621573 PURBQ96QR8 312 aaKnown RBP11.35□□□□□ -0.59
TARDBP-224ENST00000621573 ZNF395Q9H8N7 513 aaPredicted RBP11.35□□□□□ -0.59
TARDBP-224ENST00000621573 TRPM1Q7Z4N2 1603 aa11.35□□□□□ -0.59
TARDBP-224ENST00000621573 BMP2P12643 396 aa11.34□□□□□ -0.59
TARDBP-224ENST00000621573 SCARF1Q14162 830 aa11.34□□□□□ -0.59
TARDBP-224ENST00000621573 MKRN1Q9UHC7 482 aaKnown RBP11.34□□□□□ -0.59
TARDBP-224ENST00000621573 PCDHGA11Q9Y5H2 935 aa11.34□□□□□ -0.59
TARDBP-224ENST00000621573 NALCNQ8IZF0 1738 aa11.33□□□□□ -0.6
TARDBP-224ENST00000621573 ST20-MTHFSA0A0A6YYL1 179 aa11.33□□□□□ -0.6
TARDBP-224ENST00000621573 DDX17Q92841 729 aaKnown RBP11.33□□□□□ -0.6
TARDBP-224ENST00000621573 NUDT16Q96DE0 195 aaKnown RBP11.33□□□□□ -0.6
TARDBP-224ENST00000621573 ZFP42Q96MM3 310 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms