RNA–Protein interactions for RNA: ENST00000621218.4

PLP1-223, Transcript of proteolipid protein 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene PLP1, Length 3,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLP1-223	ENST00000621218	ERCC6L	Q2NKX8	1250 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	FILIP1	Q7Z7B0	1213 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	IPO4	Q8TEX9	1081 aa	Known RBP	10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	KCNB2	Q92953	911 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	GTF3C6	Q969F1	213 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	NUDT16	Q96DE0	195 aa	Known RBP	10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	TAF6L	Q9Y6J9	622 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	CCAR2	Q8N163	923 aa	Known RBP	10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	TM6SF1	Q9BZW5	370 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	FHOD1	Q9Y613	1164 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	TTC21B	Q7Z4L5	1316 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	DLC1	Q96QB1	1528 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	CRYBG1	Q9Y4K1	1723 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	CCDC69	A6NI79	296 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	RAB11FIP3	O75154	756 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	HNRNPH2	P55795	449 aa	Known RBP	10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	SLFNL1	Q499Z3	407 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	ADCY9	O60503	1353 aa		10.87	□□□□□ -0.67
PLP1-223	ENST00000621218	SRGAP3	O43295	1099 aa		10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	SLU7	O95391	586 aa	Known RBP	10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	H2AFX	P16104	143 aa	Predicted RBP	10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	CYP2C19	P33261	490 aa		10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	SARM1	Q6SZW1	724 aa		10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	MAP3K19	Q56UN5	1328 aa		10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	BICD2	Q8TD16	824 aa		10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	MRFAP1L1	Q96HT8	127 aa		10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	NOL10	Q9BSC4	688 aa	Known RBP	10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	PHAX	Q9H814	394 aa	Known RBP	10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	CALCOCO1	Q9P1Z2	691 aa		10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	C3	P01024	1663 aa		10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	MON2	Q7Z3U7	1717 aa		10.86	□□□□□ -0.67
PLP1-223	ENST00000621218	PEAK1	Q9H792	1746 aa		10.85	□□□□□ -0.67
PLP1-223	ENST00000621218	FAM208A	Q9UK61	1670 aa	Known RBP	10.85	□□□□□ -0.67
PLP1-223	ENST00000621218	DDX11	Q96FC9	970 aa		10.85	□□□□□ -0.67
PLP1-223	ENST00000621218	RGPD1	P0DJD0	1748 aa		10.85	□□□□□ -0.67
PLP1-223	ENST00000621218	SOX12	O15370	315 aa		10.85	□□□□□ -0.67
PLP1-223	ENST00000621218	CLCN6	P51797	869 aa		10.85	□□□□□ -0.67
PLP1-223	ENST00000621218	SLC20A2	Q08357	652 aa		10.85	□□□□□ -0.67
PLP1-223	ENST00000621218	CCDC30	Q5VVM6	783 aa		10.85	□□□□□ -0.67
PLP1-223	ENST00000621218	CREB3L3	Q68CJ9	461 aa		10.85	□□□□□ -0.67
PLP1-223	ENST00000621218	RBM8A	Q9Y5S9	174 aa	Known RBP	10.85	□□□□□ -0.67
PLP1-223	ENST00000621218	PLA2G4A	P47712	749 aa		10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	STK3	Q13188	491 aa		10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	PPP6R1	Q9UPN7	881 aa		10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	GOLGA6L19	H0YKK7	550 aa		10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	E4F1	Q66K89	784 aa	Predicted RBP	10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	DHX40	Q8IX18	779 aa	Known RBP	10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	FAM227B	Q96M60	508 aa		10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	CCDC61	Q9Y6R9	512 aa		10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	MAP3K5	Q99683	1374 aa		10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	NEMF	O60524	1076 aa		10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	TOB2	Q14106	344 aa	Predicted RBP	10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	NBPF11	Q86T75	865 aa		10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	ERCC4	Q92889	916 aa	Predicted RBP	10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	DNAJC2	Q99543	621 aa	Known RBP	10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	L2HGDH	Q9H9P8	463 aa		10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	10.84	□□□□□ -0.67
PLP1-223	ENST00000621218	CHD2	O14647	1828 aa	Known RBP	10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	JAK2	O60674	1132 aa		10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	PNMA6A	P0CW24	399 aa	Predicted RBP	10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	PDC	P20941	246 aa		10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	CEBPZ	Q03701	1054 aa	Known RBP	10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	BMS1	Q14692	1282 aa	Known RBP	10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	CCDC93	Q567U6	631 aa		10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	TXNDC2	Q86VQ3	553 aa		10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	STAG3	Q9UJ98	1225 aa		10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	USP42	Q9H9J4	1324 aa	Known RBP	10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	SLC27A2	O14975	620 aa		10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	GLRX3	O76003	335 aa	Known RBP	10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	IFIT2	P09913	472 aa	Known RBP	10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	MAP4K1	Q92918	833 aa		10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	PRR36	Q9H6K5	1346 aa		10.83	□□□□□ -0.68
PLP1-223	ENST00000621218	ZKSCAN1	P17029	563 aa	Predicted RBP	10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	NFATC2IP	Q8NCF5	419 aa		10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	KCND1	Q9NSA2	647 aa		10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	SYT10	Q6XYQ8	523 aa		10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	RUFY2	Q8WXA3	655 aa		10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	TRIM34	Q9BYJ4	488 aa		10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	GOLPH3L	Q9H4A5	285 aa		10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	AKAP12	Q02952	1782 aa		10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	ADGRL3	Q9HAR2	1447 aa		10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	RAD51AP2	Q09MP3	1159 aa		10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	REST	Q13127	1097 aa		10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	SNW1	Q13573	536 aa	Known RBP	10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.82	□□□□□ -0.68
PLP1-223	ENST00000621218	CACNA1F	O60840	1977 aa		10.81	□□□□□ -0.68
PLP1-223	ENST00000621218	TTC41P	Q6P2S7	1318 aa		10.81	□□□□□ -0.68
PLP1-223	ENST00000621218	CAVIN2	O95810	425 aa		10.81	□□□□□ -0.68
PLP1-223	ENST00000621218	FAM193A	P78312	1265 aa		10.81	□□□□□ -0.68
PLP1-223	ENST00000621218	NEK11	Q8NG66	645 aa		10.81	□□□□□ -0.68
PLP1-223	ENST00000621218	PPP1R13B	Q96KQ4	1090 aa		10.81	□□□□□ -0.68
PLP1-223	ENST00000621218	NPHP4	O75161	1426 aa	Predicted RBP	10.81	□□□□□ -0.68
PLP1-223	ENST00000621218	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
PLP1-223	ENST00000621218	ADD1	P35611	737 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms