RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ACSBG1Q96GR2 724 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC196A0A1B0GTZ2 297 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 NBPF11Q86T75 865 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 DZIP1Q86YF9 867 aaKnown RBP8.23□□□□□ -1.09
COLCA1-205ENST00000620864 CEP120Q8N960 986 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 PPP1R14CQ8TAE6 165 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 PDRG1Q9NUG6 133 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 RAI14Q9P0K7 980 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 FAM135AQ9P2D6 1515 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 PABPN1LA6NDY0 278 aaKnown RBP8.23□□□□□ -1.09
COLCA1-205ENST00000620864 LRRC27Q9C0I9 530 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 TMOD3Q9NYL9 352 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC38Q502W7 563 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 IQCGQ9H095 443 aaKnown RBP8.23□□□□□ -1.09
COLCA1-205ENST00000620864 VCXQ9H320 206 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 ZNF287Q9HBT7 754 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 FEZ2Q9UHY8 353 aaPredicted RBP8.23□□□□□ -1.09
COLCA1-205ENST00000620864 SYCE3A1L190 88 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 TNIP1Q15025 636 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 CTAGE1Q96RT6 745 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 SELENOOQ9BVL4 669 aa8.23□□□□□ -1.09
COLCA1-205ENST00000620864 CCDC129Q6ZRS4 1044 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 PDZRN3Q9UPQ7 1066 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 TNRQ92752 1358 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 KIAA1524Q8TCG1 905 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 ZFP91Q96JP5 570 aaPredicted RBP8.22□□□□□ -1.09
COLCA1-205ENST00000620864 KIAA0586Q9BVV6 1533 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 CASQ2O14958 399 aaPredicted RBP8.22□□□□□ -1.09
COLCA1-205ENST00000620864 ATP11AP98196 1134 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 TUBB2AQ13885 445 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 SETDB1Q15047 1291 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 JAKMIP2Q96AA8 810 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 TUBB2BQ9BVA1 445 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 ZHX3Q9H4I2 956 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 RABGAP1Q9Y3P9 1069 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 ASXL2Q76L83 1435 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 ATP2A1O14983 1001 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 CNGA1P29973 690 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 CROCCP2Q86T23 111 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 ANKRD50Q9ULJ7 1429 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 A0A1W2PRG0 241 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 ACTN2P35609 894 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 ARHGAP27Q6ZUM4 889 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 WAPLQ7Z5K2 1190 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 DRC1Q96MC2 740 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 NUP88Q99567 741 aaPredicted RBP8.22□□□□□ -1.09
COLCA1-205ENST00000620864 TRIM7Q9C029 511 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 PHF8Q9UPP1 1060 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 GBP1P32455 592 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 TSNAXIP1Q2TAA8 658 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 OGFRQ9NZT2 677 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 FYCO1Q9BQS8 1478 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 KIAA0753Q2KHM9 967 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 ZNF530Q6P9A1 599 aaPredicted RBP8.22□□□□□ -1.09
COLCA1-205ENST00000620864 NUP133Q8WUM0 1156 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 USP25Q9UHP3 1055 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.22□□□□□ -1.09
COLCA1-205ENST00000620864 UHRF1BP1Q6BDS2 1440 aa8.22□□□□□ -1.09
COLCA1-205ENST00000620864 ATP5DP30049 168 aa8.21□□□□□ -1.09
COLCA1-205ENST00000620864 MICALL1Q8N3F8 863 aa8.21□□□□□ -1.09
COLCA1-205ENST00000620864 STXBP4Q6ZWJ1 553 aa8.21□□□□□ -1.09
COLCA1-205ENST00000620864 CUX1P39880 1505 aa8.21□□□□□ -1.09
COLCA1-205ENST00000620864 AMPD3Q01432 767 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 CHRNA2Q15822 529 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 CCDC174Q6PII3 467 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 GAS2L2Q8NHY3 880 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 HYPKQ9NX55 129 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 MRVI1Q9Y6F6 885 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 SURF6O75683 361 aaKnown RBP8.21□□□□□ -1.1
COLCA1-205ENST00000620864 CTNNA2P26232 953 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 ERCC6LQ2NKX8 1250 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 TTC21AQ8NDW8 1320 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 CTAGE15A4D2H0 777 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 ZNF853P0CG23 659 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 CTAGE8P0CG41 777 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 MAP7D1Q3KQU3 841 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 CTAGE6Q86UF2 777 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 CTAGE4Q8IX94 777 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 ERBINQ96RT1 1412 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 ATP2B1P20020 1258 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 ARHGAP25P42331 645 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 MXRA7P84157 204 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 CEBPZQ03701 1054 aaKnown RBP8.21□□□□□ -1.1
COLCA1-205ENST00000620864 RPUSD2Q8IZ73 545 aaKnown RBP8.21□□□□□ -1.1
COLCA1-205ENST00000620864 SAMD15Q9P1V8 674 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 RSPH14Q9UHP6 348 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 ARHGEF11O15085 1522 aa8.21□□□□□ -1.1
COLCA1-205ENST00000620864 PNISRQ8TF01 805 aaKnown RBP8.2□□□□□ -1.1
COLCA1-205ENST00000620864 SSX2IPQ9Y2D8 614 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 CIB2O75838 187 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 MYL6BP14649 208 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 PPP4R3AQ6IN85 833 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 PHLDB2Q86SQ0 1253 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 GOLGA1Q92805 767 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 STMN2Q93045 179 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 RPGRIP1LQ68CZ1 1315 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 PTCD1O75127 700 aaKnown RBP8.2□□□□□ -1.1
COLCA1-205ENST00000620864 CAPN2P17655 700 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 RFC4P35249 363 aa8.2□□□□□ -1.1
COLCA1-205ENST00000620864 CERKQ8TCT0 537 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms