RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 AXIN2Q9Y2T1 843 aa9.7□□□□□ -0.86
GDNF-208ENST00000620847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.7□□□□□ -0.86
GDNF-208ENST00000620847 MRC1P22897 1456 aa9.7□□□□□ -0.86
GDNF-208ENST00000620847 F13A1P00488 732 aa9.69□□□□□ -0.86
GDNF-208ENST00000620847 PRPF40BQ6NWY9 871 aaKnown RBP9.69□□□□□ -0.86
GDNF-208ENST00000620847 PRDM10Q9NQV6 1147 aa9.69□□□□□ -0.86
GDNF-208ENST00000620847 SNRKQ9NRH2 765 aa9.69□□□□□ -0.86
GDNF-208ENST00000620847 CCDC171Q6TFL3 1326 aa9.69□□□□□ -0.86
GDNF-208ENST00000620847 MYRIPQ8NFW9 859 aa9.69□□□□□ -0.86
GDNF-208ENST00000620847 ZSCAN31Q96LW9 406 aaPredicted RBP9.69□□□□□ -0.86
GDNF-208ENST00000620847 JAKMIP1Q96N16 626 aaKnown RBP9.69□□□□□ -0.86
GDNF-208ENST00000620847 BICC1Q9H694 974 aaKnown RBP9.69□□□□□ -0.86
GDNF-208ENST00000620847 PDRG1Q9NUG6 133 aa9.69□□□□□ -0.86
GDNF-208ENST00000620847 DDX58O95786 925 aaKnown RBP9.69□□□□□ -0.86
GDNF-208ENST00000620847 EAF2Q96CJ1 260 aaPredicted RBP9.69□□□□□ -0.86
GDNF-208ENST00000620847 PRIMPOLQ96LW4 560 aa9.69□□□□□ -0.86
GDNF-208ENST00000620847 SH2B1Q9NRF2 756 aaPredicted RBP9.69□□□□□ -0.86
GDNF-208ENST00000620847 CYP46A1Q9Y6A2 500 aa9.69□□□□□ -0.86
GDNF-208ENST00000620847 KIF1AQ12756 1690 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 MST1RQ04912 1400 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 UBE2HP62256 183 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 CCDC183Q5T5S1 534 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 HIP1O00291 1037 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 GJB2P29033 226 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 DMTNQ08495 405 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 ST3GAL1Q11201 340 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 MAP4K1Q92918 833 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 ZHX1Q9UKY1 873 aaPredicted RBP9.68□□□□□ -0.86
GDNF-208ENST00000620847 ATP6V1DQ9Y5K8 247 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 ALS2Q96Q42 1657 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 IGKV5-2P06315 115 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 G3BP1Q13283 466 aaKnown RBP eCLIP9.68□□□□□ -0.86
GDNF-208ENST00000620847 CCDC83Q8IWF9 413 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 FAM184AQ8NB25 1140 aa9.68□□□□□ -0.86
GDNF-208ENST00000620847 LETM1O95202 739 aaPredicted RBP9.67□□□□□ -0.86
GDNF-208ENST00000620847 UVSSAQ2YD98 709 aa9.67□□□□□ -0.86
GDNF-208ENST00000620847 CREB3L3Q68CJ9 461 aa9.67□□□□□ -0.86
GDNF-208ENST00000620847 KLHL34Q8N239 644 aa9.67□□□□□ -0.86
GDNF-208ENST00000620847 FAM227BQ96M60 508 aa9.67□□□□□ -0.86
GDNF-208ENST00000620847 MTMR6Q9Y217 621 aa9.67□□□□□ -0.86
GDNF-208ENST00000620847 RBM8AQ9Y5S9 174 aaKnown RBP9.67□□□□□ -0.86
GDNF-208ENST00000620847 NMIQ13287 307 aaPredicted RBP9.67□□□□□ -0.86
GDNF-208ENST00000620847 NPHP4O75161 1426 aaPredicted RBP9.67□□□□□ -0.86
GDNF-208ENST00000620847 ERBB3P21860 1342 aa9.67□□□□□ -0.86
GDNF-208ENST00000620847 ZKSCAN1P17029 563 aaPredicted RBP9.67□□□□□ -0.86
GDNF-208ENST00000620847 AIMP1Q12904 312 aaKnown RBP9.67□□□□□ -0.86
GDNF-208ENST00000620847 ME3Q16798 604 aa9.67□□□□□ -0.86
GDNF-208ENST00000620847 CCDC8Q9H0W5 538 aaPredicted RBP9.67□□□□□ -0.86
GDNF-208ENST00000620847 TLR7Q9NYK1 1049 aaKnown RBP9.67□□□□□ -0.86
GDNF-208ENST00000620847 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.67□□□□□ -0.86
GDNF-208ENST00000620847 KDM6AO15550 1401 aaPredicted RBP9.66□□□□□ -0.86
GDNF-208ENST00000620847 JCADQ9P266 1359 aa9.66□□□□□ -0.86
GDNF-208ENST00000620847 AFDNP55196 1824 aaKnown RBP9.66□□□□□ -0.86
GDNF-208ENST00000620847 ZNF790Q6PG37 636 aa9.66□□□□□ -0.86
GDNF-208ENST00000620847 LARP1Q6PKG0 1096 aaKnown RBP9.66□□□□□ -0.86
GDNF-208ENST00000620847 A0A0U1RQG5 324 aaPredicted RBP9.66□□□□□ -0.86
GDNF-208ENST00000620847 NEURL1BA8MQ27 555 aa9.66□□□□□ -0.86
GDNF-208ENST00000620847 MED23Q9ULK4 1368 aa9.66□□□□□ -0.86
GDNF-208ENST00000620847 SLC27A2O14975 620 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 LMOD2Q6P5Q4 547 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 KRT28Q7Z3Y7 464 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 RIC3Q7Z5B4 369 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 GTPBP4Q9BZE4 634 aaKnown RBP9.65□□□□□ -0.86
GDNF-208ENST00000620847 SLC52A2Q9HAB3 445 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 TPCN1Q9ULQ1 816 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 ADAMTSL3P82987 1691 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 A0A0D9SFI3 127 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 GCKRQ14397 625 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 ALDH8A1Q9H2A2 487 aaPredicted RBP9.65□□□□□ -0.86
GDNF-208ENST00000620847 ABCC6O95255 1503 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 FIBPO43427 364 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 PSMA5P28066 241 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 DNM1Q05193 864 aaKnown RBP9.65□□□□□ -0.86
GDNF-208ENST00000620847 FUCA2Q9BTY2 467 aa9.65□□□□□ -0.86
GDNF-208ENST00000620847 COL18A1P39060 1754 aa9.65□□□□□ -0.87
GDNF-208ENST00000620847 NPHP3Q7Z494 1330 aa9.65□□□□□ -0.87
GDNF-208ENST00000620847 ZSCAN20P17040 1043 aaPredicted RBP9.64□□□□□ -0.87
GDNF-208ENST00000620847 SLC39A6Q13433 755 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 PIBF1Q8WXW3 757 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
GDNF-208ENST00000620847 SIL1Q9H173 461 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 BOLA2Q9H3K6 86 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 KIF3AQ9Y496 699 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 ARFGEF2Q9Y6D5 1785 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 C1orf167Q5SNV9 1468 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 PDIA4P13667 645 aaKnown RBP9.64□□□□□ -0.87
GDNF-208ENST00000620847 NEXNQ0ZGT2 675 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 COL9A3Q14050 684 aaPredicted RBP9.64□□□□□ -0.87
GDNF-208ENST00000620847 NOLC1Q14978 699 aaKnown RBP eCLIP9.64□□□□□ -0.87
GDNF-208ENST00000620847 EPHA10Q5JZY3 1008 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 LRP10Q7Z4F1 713 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 NECAB1Q8N987 351 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 KLHDC4Q8TBB5 520 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 DDX54Q8TDD1 881 aaKnown RBP9.64□□□□□ -0.87
GDNF-208ENST00000620847 FSD1Q9BTV5 496 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 KCNJ4P48050 445 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 XAGE3Q8WTP9 111 aa9.64□□□□□ -0.87
GDNF-208ENST00000620847 DTNBO60941 627 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 MYL6BP14649 208 aa9.63□□□□□ -0.87
GDNF-208ENST00000620847 PHKG2P15735 406 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms