RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 RBM17Q96I25 401 aaKnown RBP31.28■■■□□ 2.6
ATXN3-252ENST00000620536 CFAP44Q96MT7 982 aa31.28■■■□□ 2.6
ATXN3-252ENST00000620536 UTP14AQ9BVJ6 771 aaKnown RBP31.28■■■□□ 2.6
ATXN3-252ENST00000620536 ZNF277Q9NRM2 450 aaPredicted RBP31.28■■■□□ 2.6
ATXN3-252ENST00000620536 WDR90Q96KV7 1748 aa31.27■■■□□ 2.6
ATXN3-252ENST00000620536 POTECB2RU33 542 aa31.27■■■□□ 2.6
ATXN3-252ENST00000620536 DDNO94850 711 aaPredicted RBP31.27■■■□□ 2.6
ATXN3-252ENST00000620536 HOXA10P31260 410 aaPredicted RBP31.27■■■□□ 2.6
ATXN3-252ENST00000620536 HOXB7P09629 217 aa31.26■■■□□ 2.59
ATXN3-252ENST00000620536 HDGFL1Q5TGJ6 251 aa31.26■■■□□ 2.59
ATXN3-252ENST00000620536 NLRP3Q96P20 1036 aa31.26■■■□□ 2.59
ATXN3-252ENST00000620536 APAF1O14727 1248 aa31.25■■■□□ 2.59
ATXN3-252ENST00000620536 CC2D2BQ6DHV5 1058 aa31.25■■■□□ 2.59
ATXN3-252ENST00000620536 SYNE4Q8N205 404 aa31.25■■■□□ 2.59
ATXN3-252ENST00000620536 DNAJC5GQ8N7S2 189 aa31.25■■■□□ 2.59
ATXN3-252ENST00000620536 ZEB1P37275 1124 aaPredicted RBP31.24■■■□□ 2.59
ATXN3-252ENST00000620536 CRAMP1Q96RY5 1269 aa31.24■■■□□ 2.59
ATXN3-252ENST00000620536 CHPF2Q9P2E5 772 aa31.24■■■□□ 2.59
ATXN3-252ENST00000620536 IARSP41252 1262 aaKnown RBP31.22■■■□□ 2.59
ATXN3-252ENST00000620536 CALD1Q05682 793 aaKnown RBP31.22■■■□□ 2.59
ATXN3-252ENST00000620536 TCIRG1Q13488 830 aa31.22■■■□□ 2.59
ATXN3-252ENST00000620536 SLC10A5Q5PT55 438 aa31.22■■■□□ 2.59
ATXN3-252ENST00000620536 DBF4Q9UBU7 674 aaPredicted RBP31.22■■■□□ 2.59
ATXN3-252ENST00000620536 RNF123Q5XPI4 1314 aa31.22■■■□□ 2.59
ATXN3-252ENST00000620536 HTRA3P83110 453 aa31.21■■■□□ 2.59
ATXN3-252ENST00000620536 GRIPAP1Q4V328 841 aa31.21■■■□□ 2.59
ATXN3-252ENST00000620536 PSMD1Q99460 953 aa31.21■■■□□ 2.59
ATXN3-252ENST00000620536 MBIPQ9NS73 344 aa31.21■■■□□ 2.59
ATXN3-252ENST00000620536 PPEF1O14829 653 aaPredicted RBP31.2■■■□□ 2.59
ATXN3-252ENST00000620536 DUSP27Q5VZP5 1158 aa31.2■■■□□ 2.59
ATXN3-252ENST00000620536 C3orf67Q6ZVT6 689 aa31.2■■■□□ 2.59
ATXN3-252ENST00000620536 NLRP10Q86W26 655 aa31.2■■■□□ 2.59
ATXN3-252ENST00000620536 IQCA1LA6NCM1 817 aa31.19■■■□□ 2.58
ATXN3-252ENST00000620536 TMX4Q9H1E5 349 aaPredicted RBP31.19■■■□□ 2.58
ATXN3-252ENST00000620536 TCERG1O14776 1098 aaKnown RBP31.18■■■□□ 2.58
ATXN3-252ENST00000620536 GNAI1P63096 354 aa31.18■■■□□ 2.58
ATXN3-252ENST00000620536 IFT57Q9NWB7 429 aa31.18■■■□□ 2.58
ATXN3-252ENST00000620536 TRMT112Q9UI30 125 aaKnown RBP31.18■■■□□ 2.58
ATXN3-252ENST00000620536 ZNF853P0CG23 659 aa31.17■■■□□ 2.58
ATXN3-252ENST00000620536 ANKRD13DQ6ZTN6 518 aa31.17■■■□□ 2.58
ATXN3-252ENST00000620536 PLBD2Q8NHP8 589 aa31.17■■■□□ 2.58
ATXN3-252ENST00000620536 JDP2Q8WYK2 163 aa31.17■■■□□ 2.58
ATXN3-252ENST00000620536 HYPKQ9NX55 129 aa31.17■■■□□ 2.58
ATXN3-252ENST00000620536 L3MBTL3Q96JM7 780 aaPredicted RBP31.16■■■□□ 2.58
ATXN3-252ENST00000620536 ZNF541Q9H0D2 1346 aa31.16■■■□□ 2.58
ATXN3-252ENST00000620536 ANKRD36CQ5JPF3 1778 aa31.15■■■□□ 2.58
ATXN3-252ENST00000620536 SNED1Q8TER0 1413 aa31.15■■■□□ 2.58
ATXN3-252ENST00000620536 FZD9O00144 591 aa31.14■■■□□ 2.58
ATXN3-252ENST00000620536 CHADLQ6NUI6 762 aa31.14■■■□□ 2.58
ATXN3-252ENST00000620536 KLRG1Q96E93 195 aa31.14■■■□□ 2.58
ATXN3-252ENST00000620536 SH3TC1Q8TE82 1336 aa31.14■■■□□ 2.58
ATXN3-252ENST00000620536 HCLS1P14317 486 aaPredicted RBP31.13■■■□□ 2.57
ATXN3-252ENST00000620536 ABCC4O15439 1325 aa31.11■■■□□ 2.57
ATXN3-252ENST00000620536 ATP6V0A2Q9Y487 856 aa31.11■■■□□ 2.57
ATXN3-252ENST00000620536 ELL2O00472 640 aaPredicted RBP31.1■■■□□ 2.57
ATXN3-252ENST00000620536 LARGE2Q8N3Y3 721 aa31.1■■■□□ 2.57
ATXN3-252ENST00000620536 TAF1DQ9H5J8 278 aaPredicted RBP31.1■■■□□ 2.57
ATXN3-252ENST00000620536 BBOX1O75936 387 aa31.09■■■□□ 2.57
ATXN3-252ENST00000620536 EIF6P56537 245 aaKnown RBP31.09■■■□□ 2.57
ATXN3-252ENST00000620536 DDX46Q7L014 1031 aaKnown RBP31.09■■■□□ 2.57
ATXN3-252ENST00000620536 GPC2Q8N158 579 aa31.09■■■□□ 2.57
ATXN3-252ENST00000620536 ZNF428Q96B54 188 aa31.09■■■□□ 2.57
ATXN3-252ENST00000620536 HACL1Q9UJ83 578 aa31.09■■■□□ 2.57
ATXN3-252ENST00000620536 POTEIP0CG38 1075 aa31.08■■■□□ 2.57
ATXN3-252ENST00000620536 POTEJP0CG39 1038 aa31.08■■■□□ 2.57
ATXN3-252ENST00000620536 CCDC184Q52MB2 194 aa31.08■■■□□ 2.57
ATXN3-252ENST00000620536 ISCA1Q9BUE6 129 aa31.08■■■□□ 2.57
ATXN3-252ENST00000620536 ATP5J2-PTCD1G3V325 749 aa31.07■■■□□ 2.56
ATXN3-252ENST00000620536 SLC51AQ86UW1 340 aa31.07■■■□□ 2.56
ATXN3-252ENST00000620536 LDHDQ86WU2 507 aa31.07■■■□□ 2.56
ATXN3-252ENST00000620536 SCN4AP35499 1836 aa31.07■■■□□ 2.56
ATXN3-252ENST00000620536 CHMP4AQ9BY43 222 aa31.06■■■□□ 2.56
ATXN3-252ENST00000620536 GOLGA2Q08379 1002 aa31.05■■■□□ 2.56
ATXN3-252ENST00000620536 EAPPQ56P03 285 aaPredicted RBP31.05■■■□□ 2.56
ATXN3-252ENST00000620536 RIC3Q7Z5B4 369 aa31.05■■■□□ 2.56
ATXN3-252ENST00000620536 SP8Q8IXZ3 490 aa31.05■■■□□ 2.56
ATXN3-252ENST00000620536 SUPT20HQ8NEM7 779 aa31.05■■■□□ 2.56
ATXN3-252ENST00000620536 GJA3Q9Y6H8 435 aa31.05■■■□□ 2.56
ATXN3-252ENST00000620536 EPHX2P34913 555 aa31.04■■■□□ 2.56
ATXN3-252ENST00000620536 NIM1KQ8IY84 436 aa31.04■■■□□ 2.56
ATXN3-252ENST00000620536 C8orf58Q8NAV2 365 aa31.04■■■□□ 2.56
ATXN3-252ENST00000620536 FAM89AQ96GI7 184 aa31.04■■■□□ 2.56
ATXN3-252ENST00000620536 VPS33BQ9H267 617 aa31.04■■■□□ 2.56
ATXN3-252ENST00000620536 PPIP5K2O43314 1243 aa31.03■■■□□ 2.56
ATXN3-252ENST00000620536 GRAPQ13588 217 aa31.03■■■□□ 2.56
ATXN3-252ENST00000620536 PNMA8AQ86V59 439 aaPredicted RBP31.03■■■□□ 2.56
ATXN3-252ENST00000620536 JMYQ8N9B5 988 aa31.03■■■□□ 2.56
ATXN3-252ENST00000620536 GRAPLQ8TC17 118 aaPredicted RBP31.03■■■□□ 2.56
ATXN3-252ENST00000620536 CLEC11AQ9Y240 323 aa31.03■■■□□ 2.56
ATXN3-252ENST00000620536 ZNF316A6NFI3 1004 aaPredicted RBP31.02■■■□□ 2.56
ATXN3-252ENST00000620536 DPP8Q6V1X1 898 aaPredicted RBP31.02■■■□□ 2.56
ATXN3-252ENST00000620536 PHAXQ9H814 394 aaKnown RBP31.02■■■□□ 2.56
ATXN3-252ENST00000620536 COL4A5P29400 1685 aa31.01■■■□□ 2.55
ATXN3-252ENST00000620536 TRIM28Q13263 835 aaKnown RBP31.01■■■□□ 2.55
ATXN3-252ENST00000620536 AOC3Q16853 763 aa31.01■■■□□ 2.55
ATXN3-252ENST00000620536 MPNDQ8N594 471 aa31.01■■■□□ 2.55
ATXN3-252ENST00000620536 LAMB2P55268 1798 aa31.01■■■□□ 2.55
ATXN3-252ENST00000620536 ANP32CO43423 234 aa31■■■□□ 2.55
ATXN3-252ENST00000620536 CCDC30Q5VVM6 783 aa31■■■□□ 2.55
ATXN3-252ENST00000620536 TMC4Q7Z404 712 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms