RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 MAPTP10636 758 aaKnown RBP6.24□□□□□ -1.41
MALAT1-216ENST00000620465 MAPK1P28482 360 aa6.24□□□□□ -1.41
MALAT1-216ENST00000620465 MZF1P28698 734 aaPredicted RBP6.24□□□□□ -1.41
MALAT1-216ENST00000620465 VEGFBP49765 207 aa6.24□□□□□ -1.41
MALAT1-216ENST00000620465 MARSP56192 900 aaKnown RBP6.24□□□□□ -1.41
MALAT1-216ENST00000620465 DNM1Q05193 864 aaKnown RBP6.24□□□□□ -1.41
MALAT1-216ENST00000620465 RGL4Q8IZJ4 473 aa6.24□□□□□ -1.41
MALAT1-216ENST00000620465 VWA5B2Q8N398 1253 aa6.24□□□□□ -1.41
MALAT1-216ENST00000620465 GPR152Q8TDT2 470 aa6.24□□□□□ -1.41
MALAT1-216ENST00000620465 EDEM1Q92611 657 aa6.24□□□□□ -1.41
MALAT1-216ENST00000620465 ABHD17AQ96GS6 310 aa6.24□□□□□ -1.41
MALAT1-216ENST00000620465 OPLAHO14841 1288 aa6.23□□□□□ -1.41
MALAT1-216ENST00000620465 PDGFAP04085 211 aa6.23□□□□□ -1.41
MALAT1-216ENST00000620465 RPLP1P05386 114 aaKnown RBP6.23□□□□□ -1.41
MALAT1-216ENST00000620465 USP5P45974 858 aa6.23□□□□□ -1.41
MALAT1-216ENST00000620465 KCNQ4P56696 695 aa6.23□□□□□ -1.41
MALAT1-216ENST00000620465 TNP2Q05952 138 aa6.23□□□□□ -1.41
MALAT1-216ENST00000620465 CFHR5Q9BXR6 569 aa6.23□□□□□ -1.41
MALAT1-216ENST00000620465 CCDC87Q9NVE4 849 aa6.23□□□□□ -1.41
MALAT1-216ENST00000620465 KCNH4Q9UQ05 1017 aa6.23□□□□□ -1.41
MALAT1-216ENST00000620465 RTCBQ9Y3I0 505 aaKnown RBP6.23□□□□□ -1.41
MALAT1-216ENST00000620465 CCDC9Q9Y3X0 531 aaKnown RBP6.23□□□□□ -1.41
MALAT1-216ENST00000620465 GPR25O00155 361 aa6.22□□□□□ -1.41
MALAT1-216ENST00000620465 VSIG8P0DPA2 414 aa6.22□□□□□ -1.41
MALAT1-216ENST00000620465 MFAP1P55081 439 aaKnown RBP6.22□□□□□ -1.41
MALAT1-216ENST00000620465 TTC16Q8NEE8 873 aa6.22□□□□□ -1.41
MALAT1-216ENST00000620465 SLC16A10Q8TF71 515 aa6.22□□□□□ -1.41
MALAT1-216ENST00000620465 NUDT16Q96DE0 195 aaKnown RBP6.22□□□□□ -1.41
MALAT1-216ENST00000620465 CITED4Q96RK1 184 aa6.22□□□□□ -1.41
MALAT1-216ENST00000620465 RBCK1Q9BYM8 510 aa6.22□□□□□ -1.41
MALAT1-216ENST00000620465 C11orf16Q9NQ32 467 aa6.22□□□□□ -1.41
MALAT1-216ENST00000620465 POLIQ9UNA4 740 aa6.22□□□□□ -1.41
MALAT1-216ENST00000620465 TERTO14746 1132 aaKnown RBP6.21□□□□□ -1.42
MALAT1-216ENST00000620465 CD33P20138 364 aa6.21□□□□□ -1.42
MALAT1-216ENST00000620465 FGFR3P22607 806 aa6.21□□□□□ -1.42
MALAT1-216ENST00000620465 PDE3BQ13370 1112 aa6.21□□□□□ -1.42
MALAT1-216ENST00000620465 TRIP4Q15650 581 aaPredicted RBP6.21□□□□□ -1.42
MALAT1-216ENST00000620465 ZSCAN29Q8IWY8 852 aaPredicted RBP6.21□□□□□ -1.42
MALAT1-216ENST00000620465 GJD3Q8N144 294 aa6.21□□□□□ -1.42
MALAT1-216ENST00000620465 CMTR1Q8N1G2 835 aaKnown RBP6.21□□□□□ -1.42
MALAT1-216ENST00000620465 MARK1Q9P0L2 795 aa6.21□□□□□ -1.42
MALAT1-216ENST00000620465 FNDC3AQ9Y2H6 1198 aaKnown RBP6.21□□□□□ -1.42
MALAT1-216ENST00000620465 USP20Q9Y2K6 914 aa6.21□□□□□ -1.42
MALAT1-216ENST00000620465 GRNP28799 593 aaKnown RBP6.2□□□□□ -1.42
MALAT1-216ENST00000620465 EHHADHQ08426 723 aa6.2□□□□□ -1.42
MALAT1-216ENST00000620465 SFSWAPQ12872 951 aaKnown RBP6.2□□□□□ -1.42
MALAT1-216ENST00000620465 FAM182BQ5T319 152 aa6.2□□□□□ -1.42
MALAT1-216ENST00000620465 TMC1Q8TDI8 760 aa6.2□□□□□ -1.42
MALAT1-216ENST00000620465 STRN4Q9NRL3 753 aa6.2□□□□□ -1.42
MALAT1-216ENST00000620465 UBAP1LF5GYI3 381 aa6.19□□□□□ -1.42
MALAT1-216ENST00000620465 XYLBO75191 536 aa6.19□□□□□ -1.42
MALAT1-216ENST00000620465 SPEM2Q0P670 501 aa6.19□□□□□ -1.42
MALAT1-216ENST00000620465 C8orf34Q49A92 452 aa6.19□□□□□ -1.42
MALAT1-216ENST00000620465 IRF7Q92985 503 aa6.19□□□□□ -1.42
MALAT1-216ENST00000620465 DMRTB1Q96MA1 342 aa6.19□□□□□ -1.42
MALAT1-216ENST00000620465 ASB16Q96NS5 453 aa6.19□□□□□ -1.42
MALAT1-216ENST00000620465 FAM129BQ96TA1 746 aa6.19□□□□□ -1.42
MALAT1-216ENST00000620465 KCNMB2Q9Y691 235 aa6.19□□□□□ -1.42
MALAT1-216ENST00000620465 EGFRP00533 1210 aa6.18□□□□□ -1.42
MALAT1-216ENST00000620465 NFX1Q12986 1120 aaKnown RBP6.18□□□□□ -1.42
MALAT1-216ENST00000620465 NEUROD1Q13562 356 aa6.18□□□□□ -1.42
MALAT1-216ENST00000620465 CCINQ13939 588 aa6.18□□□□□ -1.42
MALAT1-216ENST00000620465 GAS6Q14393 721 aa6.18□□□□□ -1.42
MALAT1-216ENST00000620465 PDE12Q6L8Q7 609 aaKnown RBP6.18□□□□□ -1.42
MALAT1-216ENST00000620465 DNAJC14Q6Y2X3 702 aaPredicted RBP6.18□□□□□ -1.42
MALAT1-216ENST00000620465 TMC7Q7Z402 723 aa6.18□□□□□ -1.42
MALAT1-216ENST00000620465 PNMA5Q96PV4 448 aa6.18□□□□□ -1.42
MALAT1-216ENST00000620465 EFCC1Q9HA90 598 aa6.18□□□□□ -1.42
MALAT1-216ENST00000620465 HCN2Q9UL51 889 aa6.18□□□□□ -1.42
MALAT1-216ENST00000620465 ERBB4Q15303 1308 aa6.18□□□□□ -1.42
MALAT1-216ENST00000620465 BMP4P12644 408 aa6.17□□□□□ -1.42
MALAT1-216ENST00000620465 ERCC3P19447 782 aa6.17□□□□□ -1.42
MALAT1-216ENST00000620465 MX2P20592 715 aa6.17□□□□□ -1.42
MALAT1-216ENST00000620465 CTBSQ01459 385 aa6.17□□□□□ -1.42
MALAT1-216ENST00000620465 ZNF438Q7Z4V0 828 aa6.17□□□□□ -1.42
MALAT1-216ENST00000620465 GSX2Q9BZM3 304 aa6.17□□□□□ -1.42
MALAT1-216ENST00000620465 GGNBP2Q9H3C7 697 aa6.17□□□□□ -1.42
MALAT1-216ENST00000620465 MBIPQ9NS73 344 aa6.17□□□□□ -1.42
MALAT1-216ENST00000620465 PRR12Q9ULL5 1215 aa6.17□□□□□ -1.42
MALAT1-216ENST00000620465 NSFL1CQ9UNZ2 370 aaKnown RBP6.17□□□□□ -1.42
MALAT1-216ENST00000620465 A6NHS1 94 aa6.16□□□□□ -1.42
MALAT1-216ENST00000620465 GPR182O15218 404 aa6.16□□□□□ -1.42
MALAT1-216ENST00000620465 GRIN2CQ14957 1233 aa6.16□□□□□ -1.42
MALAT1-216ENST00000620465 ZNF468Q5VIY5 522 aaPredicted RBP6.16□□□□□ -1.42
MALAT1-216ENST00000620465 XKR5Q6UX68 686 aa6.16□□□□□ -1.42
MALAT1-216ENST00000620465 NLRP13Q86W25 1043 aa6.16□□□□□ -1.42
MALAT1-216ENST00000620465 GPR161Q8N6U8 529 aaKnown RBP6.16□□□□□ -1.42
MALAT1-216ENST00000620465 ALKBH8Q96BT7 664 aaKnown RBP6.16□□□□□ -1.42
MALAT1-216ENST00000620465 SLC30A3Q99726 388 aa6.16□□□□□ -1.42
MALAT1-216ENST00000620465 COL25A1Q9BXS0 654 aaPredicted RBP6.16□□□□□ -1.42
MALAT1-216ENST00000620465 ELP3Q9H9T3 547 aa6.16□□□□□ -1.42
MALAT1-216ENST00000620465 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.16□□□□□ -1.42
MALAT1-216ENST00000620465 ANKRD33BA6NCL7 494 aa6.15□□□□□ -1.42
MALAT1-216ENST00000620465 TREHO43280 583 aa6.15□□□□□ -1.42
MALAT1-216ENST00000620465 SASH3O75995 380 aa6.15□□□□□ -1.42
MALAT1-216ENST00000620465 IGHA2P01877 340 aa6.15□□□□□ -1.42
MALAT1-216ENST00000620465 RARAP10276 462 aa6.15□□□□□ -1.42
MALAT1-216ENST00000620465 NFKB1P19838 968 aa6.15□□□□□ -1.42
MALAT1-216ENST00000620465 MAP2K3P46734 347 aa6.15□□□□□ -1.42
MALAT1-216ENST00000620465 KRT25Q7Z3Z0 450 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms