RNA–Protein interactions for RNA: ENST00000619888.4

PAMR1-207, Transcript of peptidase domain containing associated with muscle regeneration 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAMR1, Length 3,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAMR1-207ENST00000619888 PRAMEF22A3QJZ6 481 aa12.15□□□□□ -0.46
PAMR1-207ENST00000619888 HSP90B1P14625 803 aaKnown RBP12.15□□□□□ -0.46
PAMR1-207ENST00000619888 TYRO3Q06418 890 aa12.15□□□□□ -0.46
PAMR1-207ENST00000619888 NAA30Q147X3 362 aaPredicted RBP12.15□□□□□ -0.46
PAMR1-207ENST00000619888 SPATA32Q96LK8 384 aa12.15□□□□□ -0.46
PAMR1-207ENST00000619888 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
PAMR1-207ENST00000619888 FMN2Q9NZ56 1722 aa12.15□□□□□ -0.46
PAMR1-207ENST00000619888 ECHDC1Q9NTX5 307 aa12.15□□□□□ -0.47
PAMR1-207ENST00000619888 NMIQ13287 307 aaPredicted RBP12.14□□□□□ -0.47
PAMR1-207ENST00000619888 TMEM87AQ8NBN3 555 aa12.14□□□□□ -0.47
PAMR1-207ENST00000619888 KIAA1524Q8TCG1 905 aa12.14□□□□□ -0.47
PAMR1-207ENST00000619888 GPATCH3Q96I76 525 aa12.14□□□□□ -0.47
PAMR1-207ENST00000619888 AMOTL2Q9Y2J4 779 aa12.14□□□□□ -0.47
PAMR1-207ENST00000619888 PLEKHG1Q9ULL1 1385 aa12.14□□□□□ -0.47
PAMR1-207ENST00000619888 NPHP1O15259 732 aa12.14□□□□□ -0.47
PAMR1-207ENST00000619888 CREB3L3Q68CJ9 461 aa12.14□□□□□ -0.47
PAMR1-207ENST00000619888 LARP1Q6PKG0 1096 aaKnown RBP12.14□□□□□ -0.47
PAMR1-207ENST00000619888 SMAP1Q8IYB5 467 aaPredicted RBP12.14□□□□□ -0.47
PAMR1-207ENST00000619888 DNAJC25Q9H1X3 360 aa12.14□□□□□ -0.47
PAMR1-207ENST00000619888 MAP3K2Q9Y2U5 619 aa12.14□□□□□ -0.47
PAMR1-207ENST00000619888 CHGBP05060 677 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 HOXC9P31274 260 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 ST3GAL1Q11201 340 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 FAM200AQ8TCP9 573 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 TLR7Q9NYK1 1049 aaKnown RBP12.13□□□□□ -0.47
PAMR1-207ENST00000619888 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.13□□□□□ -0.47
PAMR1-207ENST00000619888 V9GYY5 206 aaPredicted RBP12.13□□□□□ -0.47
PAMR1-207ENST00000619888 ARHGEF10O15013 1369 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 BLOC1S2Q6QNY1 142 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 MARF1Q9Y4F3 1742 aaKnown RBP12.13□□□□□ -0.47
PAMR1-207ENST00000619888 JAK2O60674 1132 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 PROSER3Q2NL68 480 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 BEND3Q5T5X7 828 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 VPS53Q5VIR6 699 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 ERCC4Q92889 916 aaPredicted RBP12.13□□□□□ -0.47
PAMR1-207ENST00000619888 CBX8Q9HC52 389 aa12.13□□□□□ -0.47
PAMR1-207ENST00000619888 BTBD11A6QL63 1104 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 POLA2Q14181 598 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 TPD52L1Q16890 204 aaPredicted RBP12.12□□□□□ -0.47
PAMR1-207ENST00000619888 LRRC59Q96AG4 307 aaKnown RBP12.12□□□□□ -0.47
PAMR1-207ENST00000619888 FUCA2Q9BTY2 467 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 SBNO1A3KN83 1393 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 MAP3K5Q99683 1374 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 CCDC171Q6TFL3 1326 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 A0A0D9SFI3 127 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 H3BQV1 296 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 G3BP1Q13283 466 aaKnown RBP eCLIP12.12□□□□□ -0.47
PAMR1-207ENST00000619888 MAPK8IP2Q13387 824 aaPredicted RBP12.12□□□□□ -0.47
PAMR1-207ENST00000619888 HSP90AB4PQ58FF6 505 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 IFFO2Q5TF58 517 aa12.12□□□□□ -0.47
PAMR1-207ENST00000619888 NR1I2O75469 434 aa12.11□□□□□ -0.47
PAMR1-207ENST00000619888 FILIP1Q7Z7B0 1213 aa12.11□□□□□ -0.47
PAMR1-207ENST00000619888 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
PAMR1-207ENST00000619888 RGPD8O14715 1765 aaPredicted RBP12.11□□□□□ -0.47
PAMR1-207ENST00000619888 AOX1Q06278 1338 aa12.11□□□□□ -0.47
PAMR1-207ENST00000619888 TNNT1P13805 278 aa12.11□□□□□ -0.47
PAMR1-207ENST00000619888 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
PAMR1-207ENST00000619888 ZNF165P49910 485 aa12.11□□□□□ -0.47
PAMR1-207ENST00000619888 ZSCAN31Q96LW9 406 aaPredicted RBP12.11□□□□□ -0.47
PAMR1-207ENST00000619888 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
PAMR1-207ENST00000619888 SPTLC3Q9NUV7 552 aa12.11□□□□□ -0.47
PAMR1-207ENST00000619888 SLC27A2O14975 620 aa12.11□□□□□ -0.47
PAMR1-207ENST00000619888 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
PAMR1-207ENST00000619888 ARID5BQ14865 1188 aa12.11□□□□□ -0.47
PAMR1-207ENST00000619888 ZNF530Q6P9A1 599 aaPredicted RBP12.11□□□□□ -0.47
PAMR1-207ENST00000619888 TRMT1Q9NXH9 659 aaKnown RBP12.11□□□□□ -0.47
PAMR1-207ENST00000619888 GUCY1B3Q02153 619 aa12.1□□□□□ -0.47
PAMR1-207ENST00000619888 EAF2Q96CJ1 260 aaPredicted RBP12.1□□□□□ -0.47
PAMR1-207ENST00000619888 DNAJC2Q99543 621 aaKnown RBP12.1□□□□□ -0.47
PAMR1-207ENST00000619888 FTOQ9C0B1 505 aaKnown RBP eCLIP12.1□□□□□ -0.47
PAMR1-207ENST00000619888 CLIP2Q9UDT6 1046 aa12.1□□□□□ -0.47
PAMR1-207ENST00000619888 LRRC37A3O60309 1634 aa12.1□□□□□ -0.47
PAMR1-207ENST00000619888 PIK3C2AO00443 1686 aa12.1□□□□□ -0.47
PAMR1-207ENST00000619888 MYL6BP14649 208 aa12.1□□□□□ -0.47
PAMR1-207ENST00000619888 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
PAMR1-207ENST00000619888 CCDC129Q6ZRS4 1044 aa12.1□□□□□ -0.47
PAMR1-207ENST00000619888 ARHGAP23Q9P227 1491 aa12.1□□□□□ -0.47
PAMR1-207ENST00000619888 SLIT1O75093 1534 aa12.1□□□□□ -0.47
PAMR1-207ENST00000619888 GOLGA6L19H0YKK7 550 aa12.09□□□□□ -0.47
PAMR1-207ENST00000619888 ZNF589Q86UQ0 364 aaPredicted RBP12.09□□□□□ -0.47
PAMR1-207ENST00000619888 SYTL4Q96C24 671 aaPredicted RBP12.09□□□□□ -0.47
PAMR1-207ENST00000619888 EVI5LQ96CN4 794 aa12.09□□□□□ -0.47
PAMR1-207ENST00000619888 KDRP35968 1356 aa12.09□□□□□ -0.47
PAMR1-207ENST00000619888 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
PAMR1-207ENST00000619888 SETD1BQ9UPS6 1966 aaKnown RBP12.09□□□□□ -0.47
PAMR1-207ENST00000619888 PSMA5P28066 241 aa12.09□□□□□ -0.47
PAMR1-207ENST00000619888 NBPF6Q5VWK0 638 aa12.09□□□□□ -0.47
PAMR1-207ENST00000619888 LEO1Q8WVC0 666 aaPredicted RBP12.09□□□□□ -0.47
PAMR1-207ENST00000619888 NBPF4Q96M43 638 aa12.09□□□□□ -0.47
PAMR1-207ENST00000619888 BICC1Q9H694 974 aaKnown RBP12.09□□□□□ -0.47
PAMR1-207ENST00000619888 TUBGCP6Q96RT7 1819 aa12.08□□□□□ -0.48
PAMR1-207ENST00000619888 VGLL3A8MV65 326 aa12.08□□□□□ -0.48
PAMR1-207ENST00000619888 PDCP20941 246 aa12.08□□□□□ -0.48
PAMR1-207ENST00000619888 BRF1Q92994 677 aa12.08□□□□□ -0.48
PAMR1-207ENST00000619888 NWD1Q149M9 1564 aa12.08□□□□□ -0.48
PAMR1-207ENST00000619888 USP54Q70EL1 1684 aa12.08□□□□□ -0.48
PAMR1-207ENST00000619888 BECN2A8MW95 431 aa12.08□□□□□ -0.48
PAMR1-207ENST00000619888 DMTNQ08495 405 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms