RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 TPTE2Q6XPS3 522 aa13.2□□□□□ -0.3
NBPF3-213ENST00000619554 DZIP1LQ8IYY4 767 aaKnown RBP13.2□□□□□ -0.3
NBPF3-213ENST00000619554 ZNF34Q8IZ26 560 aa13.2□□□□□ -0.3
NBPF3-213ENST00000619554 CCDC191Q8NCU4 936 aa13.2□□□□□ -0.3
NBPF3-213ENST00000619554 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
NBPF3-213ENST00000619554 NYXQ9GZU5 481 aa13.2□□□□□ -0.3
NBPF3-213ENST00000619554 TM4SF1P30408 202 aa13.19□□□□□ -0.3
NBPF3-213ENST00000619554 TRIM28Q13263 835 aaKnown RBP13.19□□□□□ -0.3
NBPF3-213ENST00000619554 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
NBPF3-213ENST00000619554 CWC25Q9NXE8 425 aaPredicted RBP13.19□□□□□ -0.3
NBPF3-213ENST00000619554 CARMIL3Q8ND23 1372 aa13.19□□□□□ -0.3
NBPF3-213ENST00000619554 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
NBPF3-213ENST00000619554 ATP10DQ9P241 1426 aa13.18□□□□□ -0.3
NBPF3-213ENST00000619554 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
NBPF3-213ENST00000619554 ALDH1L1O75891 902 aa13.18□□□□□ -0.3
NBPF3-213ENST00000619554 SERPINB2P05120 415 aa13.18□□□□□ -0.3
NBPF3-213ENST00000619554 AAMPQ13685 434 aa13.18□□□□□ -0.3
NBPF3-213ENST00000619554 C8orf34Q49A92 452 aa13.18□□□□□ -0.3
NBPF3-213ENST00000619554 BEND3Q5T5X7 828 aa13.18□□□□□ -0.3
NBPF3-213ENST00000619554 NLRP10Q86W26 655 aa13.18□□□□□ -0.3
NBPF3-213ENST00000619554 DAXXQ9UER7 740 aaPredicted RBP13.18□□□□□ -0.3
NBPF3-213ENST00000619554 UBR3Q6ZT12 1888 aa13.17□□□□□ -0.3
NBPF3-213ENST00000619554 NEURL1BA8MQ27 555 aa13.17□□□□□ -0.3
NBPF3-213ENST00000619554 POLRMTO00411 1230 aaKnown RBP13.17□□□□□ -0.3
NBPF3-213ENST00000619554 HSP90B1P14625 803 aaKnown RBP13.17□□□□□ -0.3
NBPF3-213ENST00000619554 ST5P78524 1137 aa13.17□□□□□ -0.3
NBPF3-213ENST00000619554 PDE3AQ14432 1141 aa13.17□□□□□ -0.3
NBPF3-213ENST00000619554 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
NBPF3-213ENST00000619554 SUSD4Q5VX71 490 aa13.17□□□□□ -0.3
NBPF3-213ENST00000619554 CNBD1Q8NA66 436 aa13.17□□□□□ -0.3
NBPF3-213ENST00000619554 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
NBPF3-213ENST00000619554 IGKV5-2P06315 115 aa13.16□□□□□ -0.3
NBPF3-213ENST00000619554 DDR1Q08345 913 aa13.16□□□□□ -0.3
NBPF3-213ENST00000619554 SRCAPQ6ZRS2 3230 aa13.16□□□□□ -0.3
NBPF3-213ENST00000619554 ABCC4O15439 1325 aa13.16□□□□□ -0.3
NBPF3-213ENST00000619554 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
NBPF3-213ENST00000619554 GCKRQ14397 625 aa13.16□□□□□ -0.3
NBPF3-213ENST00000619554 GSE1Q14687 1217 aa13.16□□□□□ -0.3
NBPF3-213ENST00000619554 ITPRIPQ8IWB1 547 aa13.16□□□□□ -0.3
NBPF3-213ENST00000619554 ZBTB38Q8NAP3 1195 aaPredicted RBP13.16□□□□□ -0.3
NBPF3-213ENST00000619554 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
NBPF3-213ENST00000619554 SH3TC1Q8TE82 1336 aa13.15□□□□□ -0.3
NBPF3-213ENST00000619554 NFKBIBQ15653 356 aa13.15□□□□□ -0.3
NBPF3-213ENST00000619554 INTS3Q68E01 1043 aaKnown RBP13.15□□□□□ -0.3
NBPF3-213ENST00000619554 HDAC5Q9UQL6 1122 aa13.15□□□□□ -0.3
NBPF3-213ENST00000619554 TMEM57Q8N5G2 664 aa13.14□□□□□ -0.31
NBPF3-213ENST00000619554 PANK1Q8TE04 598 aa13.14□□□□□ -0.31
NBPF3-213ENST00000619554 FAM89AQ96GI7 184 aa13.14□□□□□ -0.31
NBPF3-213ENST00000619554 CHMP4BQ9H444 224 aaKnown RBP13.14□□□□□ -0.31
NBPF3-213ENST00000619554 GRM8O00222 908 aa13.13□□□□□ -0.31
NBPF3-213ENST00000619554 PCCAP05165 728 aaPredicted RBP13.13□□□□□ -0.31
NBPF3-213ENST00000619554 NUTM1Q86Y26 1132 aa13.13□□□□□ -0.31
NBPF3-213ENST00000619554 NTSR2O95665 410 aa13.13□□□□□ -0.31
NBPF3-213ENST00000619554 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
NBPF3-213ENST00000619554 UBE3BQ7Z3V4 1068 aa13.13□□□□□ -0.31
NBPF3-213ENST00000619554 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
NBPF3-213ENST00000619554 TNNQ9UQP3 1299 aa13.13□□□□□ -0.31
NBPF3-213ENST00000619554 IRS4O14654 1257 aaPredicted RBP13.12□□□□□ -0.31
NBPF3-213ENST00000619554 GNAI3P08754 354 aa13.12□□□□□ -0.31
NBPF3-213ENST00000619554 RLBP1P12271 317 aa13.12□□□□□ -0.31
NBPF3-213ENST00000619554 PTGER2P43116 358 aa13.12□□□□□ -0.31
NBPF3-213ENST00000619554 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
NBPF3-213ENST00000619554 BRIP1Q9BX63 1249 aa13.12□□□□□ -0.31
NBPF3-213ENST00000619554 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
NBPF3-213ENST00000619554 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
NBPF3-213ENST00000619554 QSER1Q2KHR3 1735 aa13.12□□□□□ -0.31
NBPF3-213ENST00000619554 H7C1W4 665 aa13.11□□□□□ -0.31
NBPF3-213ENST00000619554 UBTFL1P0CB47 393 aaPredicted RBP13.11□□□□□ -0.31
NBPF3-213ENST00000619554 PDE6BP35913 854 aa13.11□□□□□ -0.31
NBPF3-213ENST00000619554 DDX19BQ9UMR2 479 aa13.11□□□□□ -0.31
NBPF3-213ENST00000619554 COG6Q9Y2V7 657 aa13.11□□□□□ -0.31
NBPF3-213ENST00000619554 CACNA1FO60840 1977 aa13.11□□□□□ -0.31
NBPF3-213ENST00000619554 MVPQ14764 893 aaKnown RBP13.11□□□□□ -0.31
NBPF3-213ENST00000619554 CCDC24Q8N4L8 307 aa13.11□□□□□ -0.31
NBPF3-213ENST00000619554 JARID2Q92833 1246 aaPredicted RBP13.11□□□□□ -0.31
NBPF3-213ENST00000619554 NLRP3Q96P20 1036 aa13.11□□□□□ -0.31
NBPF3-213ENST00000619554 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
NBPF3-213ENST00000619554 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
NBPF3-213ENST00000619554 TUBGCP6Q96RT7 1819 aa13.1□□□□□ -0.31
NBPF3-213ENST00000619554 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
NBPF3-213ENST00000619554 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
NBPF3-213ENST00000619554 SCN7AQ01118 1682 aa13.1□□□□□ -0.31
NBPF3-213ENST00000619554 SLC10A5Q5PT55 438 aa13.09□□□□□ -0.31
NBPF3-213ENST00000619554 PDZRN3Q9UPQ7 1066 aa13.09□□□□□ -0.31
NBPF3-213ENST00000619554 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
NBPF3-213ENST00000619554 CDHR2Q9BYE9 1310 aa13.09□□□□□ -0.31
NBPF3-213ENST00000619554 PDE8AO60658 829 aa13.09□□□□□ -0.31
NBPF3-213ENST00000619554 NBPF7P0C2Y1 421 aaPredicted RBP13.09□□□□□ -0.31
NBPF3-213ENST00000619554 SKAP1Q86WV1 359 aa13.09□□□□□ -0.31
NBPF3-213ENST00000619554 SYNE4Q8N205 404 aa13.09□□□□□ -0.31
NBPF3-213ENST00000619554 H0YIN7 160 aa13.08□□□□□ -0.32
NBPF3-213ENST00000619554 GNAI2P04899 355 aa13.08□□□□□ -0.32
NBPF3-213ENST00000619554 MEIS3Q99687 375 aa13.08□□□□□ -0.32
NBPF3-213ENST00000619554 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
NBPF3-213ENST00000619554 UTYO14607 1347 aa13.08□□□□□ -0.32
NBPF3-213ENST00000619554 ZBTB7BO15156 539 aaPredicted RBP13.07□□□□□ -0.32
NBPF3-213ENST00000619554 TGFB2P61812 414 aa13.07□□□□□ -0.32
NBPF3-213ENST00000619554 CCDC152Q4G0S7 254 aa13.07□□□□□ -0.32
NBPF3-213ENST00000619554 RPGRQ92834 1020 aaKnown RBP13.07□□□□□ -0.32
NBPF3-213ENST00000619554 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms