RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 LARP1BQ659C4 914 aaKnown RBP16.28■□□□□ 0.2
CNTNAP3B-215ENST00000619138 KIF20AO95235 890 aa16.28■□□□□ 0.2
CNTNAP3B-215ENST00000619138 PRPF40BQ6NWY9 871 aaKnown RBP16.28■□□□□ 0.2
CNTNAP3B-215ENST00000619138 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
CNTNAP3B-215ENST00000619138 NUTM2BA6NNL0 878 aaPredicted RBP16.28■□□□□ 0.2
CNTNAP3B-215ENST00000619138 NUTM2EB1AL46 878 aaPredicted RBP16.28■□□□□ 0.2
CNTNAP3B-215ENST00000619138 NUTM2AQ8IVF1 878 aaPredicted RBP16.28■□□□□ 0.2
CNTNAP3B-215ENST00000619138 GOLGA6L19H0YKK7 550 aa16.27■□□□□ 0.2
CNTNAP3B-215ENST00000619138 F13A1P00488 732 aa16.27■□□□□ 0.2
CNTNAP3B-215ENST00000619138 PIK3C2AO00443 1686 aa16.27■□□□□ 0.2
CNTNAP3B-215ENST00000619138 ARHGEF10O15013 1369 aa16.27■□□□□ 0.2
CNTNAP3B-215ENST00000619138 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.27■□□□□ 0.2
CNTNAP3B-215ENST00000619138 LARGE1O95461 756 aa16.27■□□□□ 0.19
CNTNAP3B-215ENST00000619138 MAP3K11Q16584 847 aa16.27■□□□□ 0.19
CNTNAP3B-215ENST00000619138 DNAJC25Q9H1X3 360 aa16.27■□□□□ 0.19
CNTNAP3B-215ENST00000619138 ST7Q9NRC1 585 aa16.27■□□□□ 0.19
CNTNAP3B-215ENST00000619138 DACT1Q9NYF0 836 aa16.27■□□□□ 0.19
CNTNAP3B-215ENST00000619138 BECN2A8MW95 431 aa16.26■□□□□ 0.19
CNTNAP3B-215ENST00000619138 LGR6Q9HBX8 967 aa16.26■□□□□ 0.19
CNTNAP3B-215ENST00000619138 LIG1P18858 919 aa16.26■□□□□ 0.19
CNTNAP3B-215ENST00000619138 ARID5BQ14865 1188 aa16.26■□□□□ 0.19
CNTNAP3B-215ENST00000619138 RASEFQ8IZ41 740 aa16.26■□□□□ 0.19
CNTNAP3B-215ENST00000619138 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
CNTNAP3B-215ENST00000619138 CLIP2Q9UDT6 1046 aa16.26■□□□□ 0.19
CNTNAP3B-215ENST00000619138 ADAMTS2O95450 1211 aa16.25■□□□□ 0.19
CNTNAP3B-215ENST00000619138 NCBP1Q09161 790 aaKnown RBP16.25■□□□□ 0.19
CNTNAP3B-215ENST00000619138 SPATA31A3Q5VYP0 1347 aa16.25■□□□□ 0.19
CNTNAP3B-215ENST00000619138 KIAA0232Q92628 1395 aa16.25■□□□□ 0.19
CNTNAP3B-215ENST00000619138 POLR3GO15318 223 aaPredicted RBP16.25■□□□□ 0.19
CNTNAP3B-215ENST00000619138 TATP17735 454 aaPredicted RBP16.25■□□□□ 0.19
CNTNAP3B-215ENST00000619138 DDX11Q96FC9 970 aa16.24■□□□□ 0.19
CNTNAP3B-215ENST00000619138 RTL1A6NKG5 1358 aa16.24■□□□□ 0.19
CNTNAP3B-215ENST00000619138 TYRO3Q06418 890 aa16.24■□□□□ 0.19
CNTNAP3B-215ENST00000619138 CCAR2Q8N163 923 aaKnown RBP16.24■□□□□ 0.19
CNTNAP3B-215ENST00000619138 GTF3C6Q969F1 213 aa16.24■□□□□ 0.19
CNTNAP3B-215ENST00000619138 LIMCH1Q9UPQ0 1083 aa16.24■□□□□ 0.19
CNTNAP3B-215ENST00000619138 PDRG1Q9NUG6 133 aa16.24■□□□□ 0.19
CNTNAP3B-215ENST00000619138 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
CNTNAP3B-215ENST00000619138 FAM177A1Q8N128 213 aaPredicted RBP16.23■□□□□ 0.19
CNTNAP3B-215ENST00000619138 IL17REQ8NFR9 667 aa16.23■□□□□ 0.19
CNTNAP3B-215ENST00000619138 UBTFL1P0CB47 393 aaPredicted RBP16.23■□□□□ 0.19
CNTNAP3B-215ENST00000619138 GTF2E1P29083 439 aaPredicted RBP16.23■□□□□ 0.19
CNTNAP3B-215ENST00000619138 NRKQ7Z2Y5 1582 aa16.23■□□□□ 0.19
CNTNAP3B-215ENST00000619138 CUL4AQ13619 759 aa16.23■□□□□ 0.19
CNTNAP3B-215ENST00000619138 ZRSR1Q15695 479 aaKnown RBP16.23■□□□□ 0.19
CNTNAP3B-215ENST00000619138 PEAK1Q9H792 1746 aa16.23■□□□□ 0.19
CNTNAP3B-215ENST00000619138 ZNF165P49910 485 aa16.22■□□□□ 0.19
CNTNAP3B-215ENST00000619138 INTS4Q96HW7 963 aaKnown RBP16.22■□□□□ 0.19
CNTNAP3B-215ENST00000619138 TMX1Q9H3N1 280 aa16.22■□□□□ 0.19
CNTNAP3B-215ENST00000619138 OGFRQ9NZT2 677 aa16.22■□□□□ 0.19
CNTNAP3B-215ENST00000619138 KRT85P78386 507 aa16.22■□□□□ 0.19
CNTNAP3B-215ENST00000619138 ELF2Q15723 593 aa16.22■□□□□ 0.19
CNTNAP3B-215ENST00000619138 CEP135Q66GS9 1140 aa16.22■□□□□ 0.19
CNTNAP3B-215ENST00000619138 SPATA32Q96LK8 384 aa16.22■□□□□ 0.19
CNTNAP3B-215ENST00000619138 GTF2F1P35269 517 aaKnown RBP eCLIP16.22■□□□□ 0.19
CNTNAP3B-215ENST00000619138 RUFY3Q7L099 469 aa16.21■□□□□ 0.19
CNTNAP3B-215ENST00000619138 FAM200AQ8TCP9 573 aa16.21■□□□□ 0.19
CNTNAP3B-215ENST00000619138 ANXA1P04083 346 aa16.21■□□□□ 0.19
CNTNAP3B-215ENST00000619138 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
CNTNAP3B-215ENST00000619138 CERS3Q8IU89 383 aa16.21■□□□□ 0.19
CNTNAP3B-215ENST00000619138 ZNF215Q9UL58 517 aaPredicted RBP16.21■□□□□ 0.19
CNTNAP3B-215ENST00000619138 SNX14Q9Y5W7 946 aa16.21■□□□□ 0.19
CNTNAP3B-215ENST00000619138 SRGAP3O43295 1099 aa16.21■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CBX8Q9HC52 389 aa16.21■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CHL1O00533 1208 aa16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 ERBB3P21860 1342 aa16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 BTBD11A6QL63 1104 aa16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 H3BQV1 296 aa16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 IFFO2Q5TF58 517 aa16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 MAP3K5Q99683 1374 aa16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 STRCP1A6NGW2 1772 aa16.2■□□□□ 0.18
CNTNAP3B-215ENST00000619138 NWD1Q149M9 1564 aa16.19■□□□□ 0.18
CNTNAP3B-215ENST00000619138 ADCK5Q3MIX3 580 aa16.19■□□□□ 0.18
CNTNAP3B-215ENST00000619138 TTC6Q86TZ1 520 aa16.19■□□□□ 0.18
CNTNAP3B-215ENST00000619138 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
CNTNAP3B-215ENST00000619138 ZNF853P0CG23 659 aa16.19■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CDC37L1Q7L3B6 337 aa16.19■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CACTINQ8WUQ7 758 aaKnown RBP16.19■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
CNTNAP3B-215ENST00000619138 KAT6BQ8WYB5 2073 aa16.18■□□□□ 0.18
CNTNAP3B-215ENST00000619138 USP27XA6NNY8 438 aa16.18■□□□□ 0.18
CNTNAP3B-215ENST00000619138 UBAP1LF5GYI3 381 aa16.18■□□□□ 0.18
CNTNAP3B-215ENST00000619138 TPM3P06753 285 aa16.18■□□□□ 0.18
CNTNAP3B-215ENST00000619138 GNL2Q13823 731 aaKnown RBP16.18■□□□□ 0.18
CNTNAP3B-215ENST00000619138 AMOTQ4VCS5 1084 aa16.18■□□□□ 0.18
CNTNAP3B-215ENST00000619138 SPTLC3Q9NUV7 552 aa16.18■□□□□ 0.18
CNTNAP3B-215ENST00000619138 KCNQ3O43525 872 aa16.18■□□□□ 0.18
CNTNAP3B-215ENST00000619138 RAB11FIP3O75154 756 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 ZKSCAN1P17029 563 aaPredicted RBP16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CCT4P50991 539 aaKnown RBP16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CNTROBQ8N137 903 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 KRT222Q8N1A0 295 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 KIF24Q5T7B8 1368 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 CCDC66A2RUB6 948 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 SKILP12757 684 aa16.17■□□□□ 0.18
CNTNAP3B-215ENST00000619138 GUCY1B3Q02153 619 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms