RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 MLLT3P42568 568 aaPredicted RBP8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 NEK4P51957 841 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 ZNF445P59923 1031 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 RIC3Q7Z5B4 369 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 SRCIN1Q9C0H9 1055 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 SYCE3A1L190 88 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 ERC2O15083 957 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 CHAF1AQ13111 956 aaPredicted RBP8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 PROSER3Q2NL68 480 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 TTC22Q5TAA0 569 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 HYPKQ9NX55 129 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 TRIM6-TRIM34B2RNG4 842 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 MCM5P33992 734 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 MCM2P49736 904 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 DNAAF4Q8WXU2 420 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 TSPY26PQ9H489 355 aa8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 VIRMAQ69YN4 1812 aaKnown RBP8.41□□□□□ -1.06
SRGAP3-213ENST00000618999 COL18A1P39060 1754 aa8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 JCADQ9P266 1359 aa8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 IBTKQ9P2D0 1353 aaPredicted RBP8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 ZMYND10O75800 440 aa8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 GNAI3P08754 354 aa8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 DDIT3P35638 169 aa8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 FAM98CQ17RN3 349 aaKnown RBP8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 FOXD4L6Q3SYB3 417 aaPredicted RBP8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 FOXD4L3Q6VB84 417 aaPredicted RBP8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 DDX21Q9NR30 783 aaKnown RBP eCLIP8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 GNAI2P04899 355 aa8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 HSPA1LP34931 641 aa8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 RPAP2Q8IXW5 612 aaPredicted RBP8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 POM121Q96HA1 1249 aa8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 C9orf78Q9NZ63 289 aaPredicted RBP8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 MAP3K2Q9Y2U5 619 aa8.4□□□□□ -1.06
SRGAP3-213ENST00000618999 ABCC6O95255 1503 aa8.4□□□□□ -1.07
SRGAP3-213ENST00000618999 UBTFL1P0CB47 393 aaPredicted RBP8.4□□□□□ -1.07
SRGAP3-213ENST00000618999 PRIM1P49642 420 aaKnown RBP8.4□□□□□ -1.07
SRGAP3-213ENST00000618999 TERF1P54274 439 aa8.4□□□□□ -1.07
SRGAP3-213ENST00000618999 UNC5CLQ8IV45 518 aa8.4□□□□□ -1.07
SRGAP3-213ENST00000618999 ACSBG1Q96GR2 724 aa8.4□□□□□ -1.07
SRGAP3-213ENST00000618999 CDCA7Q9BWT1 371 aaPredicted RBP8.4□□□□□ -1.07
SRGAP3-213ENST00000618999 RBM27Q9P2N5 1060 aaKnown RBP8.4□□□□□ -1.07
SRGAP3-213ENST00000618999 AHDC1Q5TGY3 1603 aaPredicted RBP8.4□□□□□ -1.07
SRGAP3-213ENST00000618999 COPS6Q7L5N1 327 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 NOL7Q9UMY1 257 aaKnown RBP8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 ZKSCAN5Q9Y2L8 839 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 NEXNQ0ZGT2 675 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 PLEKHM2Q8IWE5 1019 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 XAGE3Q8WTP9 111 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 ANO2Q9NQ90 1003 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 USP21Q9UK80 565 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 SPATA31A1Q5TZJ5 1347 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 LRSAM1Q6UWE0 723 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 RILPL2Q969X0 211 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 RBSNQ9H1K0 784 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 ASAP1Q9ULH1 1129 aa8.39□□□□□ -1.07
SRGAP3-213ENST00000618999 PHLPP1O60346 1717 aa8.38□□□□□ -1.07
SRGAP3-213ENST00000618999 SASS6Q6UVJ0 657 aa8.38□□□□□ -1.07
SRGAP3-213ENST00000618999 KSR2Q6VAB6 950 aa8.38□□□□□ -1.07
SRGAP3-213ENST00000618999 PIGBQ92521 554 aa8.38□□□□□ -1.07
SRGAP3-213ENST00000618999 USP26Q9BXU7 913 aa8.38□□□□□ -1.07
SRGAP3-213ENST00000618999 LMBRD1Q9NUN5 540 aa8.38□□□□□ -1.07
SRGAP3-213ENST00000618999 A1BGP04217 495 aa8.38□□□□□ -1.07
SRGAP3-213ENST00000618999 KIF2CQ99661 725 aa8.38□□□□□ -1.07
SRGAP3-213ENST00000618999 DCTPP1Q9H773 170 aa8.38□□□□□ -1.07
SRGAP3-213ENST00000618999 THRAP3Q9Y2W1 955 aaKnown RBP8.38□□□□□ -1.07
SRGAP3-213ENST00000618999 LMO7Q8WWI1 1683 aa8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 DYNC1I1O14576 645 aa8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 ZGPATQ8N5A5 531 aaKnown RBP8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 LRRFIP2Q9Y608 721 aaKnown RBP8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 SMARCA5O60264 1052 aaPredicted RBP8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 SDSP20132 328 aa8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 ANKRD13DQ6ZTN6 518 aa8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 GSPT1P15170 499 aaKnown RBP8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 HMGN5P82970 282 aaKnown RBP8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 CWF19L2Q2TBE0 894 aaKnown RBP8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 CEP85Q6P2H3 762 aa8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 CLEC17AQ6ZS10 378 aa8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 ANKRD44Q8N8A2 993 aa8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 SPATA31A5Q5VU36 1347 aa8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 SPATA31A7Q8IWB4 1347 aa8.37□□□□□ -1.07
SRGAP3-213ENST00000618999 PLEKHG2Q9H7P9 1386 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 TRIM66O15016 1216 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 STARD3NLO95772 234 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 SIRT2Q8IXJ6 389 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 C16orf71Q8IYS4 520 aaPredicted RBP8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 ZNF526Q8TF50 670 aaPredicted RBP8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 MYD88Q99836 296 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 USP44Q9H0E7 712 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 HEG1Q9ULI3 1381 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 DNAJC10Q8IXB1 793 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 TSPYL2Q9H2G4 693 aaPredicted RBP8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 FAM208AQ9UK61 1670 aaKnown RBP8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 RGS12O14924 1447 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 TESPA1A2RU30 521 aaPredicted RBP8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 ZNF500O60304 480 aaPredicted RBP8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 ARHGEF1Q92888 912 aaKnown RBP8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 ATP6V1DQ9Y5K8 247 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 CRYBG1Q9Y4K1 1723 aa8.36□□□□□ -1.07
SRGAP3-213ENST00000618999 SPATA31A6Q5VVP1 1343 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms