RNA–Protein interactions for RNA: ENST00000618921.4

CBWD3-214, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-214ENST00000618921 FECHP22830 423 aa8.69□□□□□ -1.02
CBWD3-214ENST00000618921 C1QBPQ07021 282 aaKnown RBP8.69□□□□□ -1.02
CBWD3-214ENST00000618921 DZIP1LQ8IYY4 767 aaKnown RBP8.69□□□□□ -1.02
CBWD3-214ENST00000618921 RBM46Q8TBY0 533 aaKnown RBP8.69□□□□□ -1.02
CBWD3-214ENST00000618921 OXER1Q8TDS5 423 aa8.69□□□□□ -1.02
CBWD3-214ENST00000618921 CALR3Q96L12 384 aaKnown RBP8.69□□□□□ -1.02
CBWD3-214ENST00000618921 TAF1LQ8IZX4 1826 aa8.69□□□□□ -1.02
CBWD3-214ENST00000618921 PALLDQ8WX93 1383 aa8.69□□□□□ -1.02
CBWD3-214ENST00000618921 MEGF6O75095 1541 aa8.69□□□□□ -1.02
CBWD3-214ENST00000618921 C5P01031 1676 aa8.68□□□□□ -1.02
CBWD3-214ENST00000618921 LOC102724159A0A0B4J2E5 919 aa8.68□□□□□ -1.02
CBWD3-214ENST00000618921 PWP2Q15269 919 aaKnown RBP8.68□□□□□ -1.02
CBWD3-214ENST00000618921 FTSJ3Q8IY81 847 aaKnown RBP8.68□□□□□ -1.02
CBWD3-214ENST00000618921 SPDYE1Q8NFV5 336 aaPredicted RBP8.68□□□□□ -1.02
CBWD3-214ENST00000618921 TRIM35Q9UPQ4 493 aa8.68□□□□□ -1.02
CBWD3-214ENST00000618921 BCS1LQ9Y276 419 aa8.68□□□□□ -1.02
CBWD3-214ENST00000618921 FCHSD2O94868 740 aa8.68□□□□□ -1.02
CBWD3-214ENST00000618921 RLBP1P12271 317 aa8.68□□□□□ -1.02
CBWD3-214ENST00000618921 SKIV2LQ15477 1246 aaKnown RBP8.68□□□□□ -1.02
CBWD3-214ENST00000618921 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
CBWD3-214ENST00000618921 TSPYL2Q9H2G4 693 aaPredicted RBP8.68□□□□□ -1.02
CBWD3-214ENST00000618921 SMC4Q9NTJ3 1288 aa8.68□□□□□ -1.02
CBWD3-214ENST00000618921 PCDHB15Q9Y5E8 787 aa8.68□□□□□ -1.02
CBWD3-214ENST00000618921 EDC4Q6P2E9 1401 aaKnown RBP8.68□□□□□ -1.02
CBWD3-214ENST00000618921 IPO8O15397 1037 aaKnown RBP8.67□□□□□ -1.02
CBWD3-214ENST00000618921 CYP27B1O15528 508 aa8.67□□□□□ -1.02
CBWD3-214ENST00000618921 MMP10P09238 476 aa8.67□□□□□ -1.02
CBWD3-214ENST00000618921 TGFB2P61812 414 aa8.67□□□□□ -1.02
CBWD3-214ENST00000618921 EXOSC9Q06265 439 aaKnown RBP8.67□□□□□ -1.02
CBWD3-214ENST00000618921 C16orf71Q8IYS4 520 aaPredicted RBP8.67□□□□□ -1.02
CBWD3-214ENST00000618921 PROCA1Q8NCQ7 364 aaPredicted RBP8.67□□□□□ -1.02
CBWD3-214ENST00000618921 PIGBQ92521 554 aa8.67□□□□□ -1.02
CBWD3-214ENST00000618921 SMARCC1Q92922 1105 aaPredicted RBP8.67□□□□□ -1.02
CBWD3-214ENST00000618921 COG3Q96JB2 828 aa8.67□□□□□ -1.02
CBWD3-214ENST00000618921 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
CBWD3-214ENST00000618921 DDX19BQ9UMR2 479 aa8.67□□□□□ -1.02
CBWD3-214ENST00000618921 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
CBWD3-214ENST00000618921 FAM208AQ9UK61 1670 aaKnown RBP8.67□□□□□ -1.02
CBWD3-214ENST00000618921 TATP17735 454 aaPredicted RBP8.66□□□□□ -1.02
CBWD3-214ENST00000618921 SSFA2P28290 1259 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 RIPK4P57078 832 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 CALD1Q05682 793 aaKnown RBP8.66□□□□□ -1.02
CBWD3-214ENST00000618921 BECN1Q14457 450 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 NAP1L5Q96NT1 182 aaPredicted RBP8.66□□□□□ -1.02
CBWD3-214ENST00000618921 REPIN1Q9BWE0 567 aaKnown RBP8.66□□□□□ -1.02
CBWD3-214ENST00000618921 UPF2Q9HAU5 1272 aaKnown RBP8.66□□□□□ -1.02
CBWD3-214ENST00000618921 PDZRN3Q9UPQ7 1066 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 IVNS1ABPQ9Y6Y0 642 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 KIF16BQ96L93 1317 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 FSTL1Q12841 308 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 RRS1Q15050 365 aaKnown RBP8.66□□□□□ -1.02
CBWD3-214ENST00000618921 ALDH1L2Q3SY69 923 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 PPP1R15BQ5SWA1 713 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 C9orf131Q5VYM1 1079 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 LINC00116Q8NCU8 138 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 TSR2Q969E8 191 aaKnown RBP8.66□□□□□ -1.02
CBWD3-214ENST00000618921 UBR3Q6ZT12 1888 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 WDR90Q96KV7 1748 aa8.66□□□□□ -1.02
CBWD3-214ENST00000618921 ZC3H4Q9UPT8 1303 aaKnown RBP8.65□□□□□ -1.02
CBWD3-214ENST00000618921 LOC102724428A0A0B4J2F2 783 aa8.65□□□□□ -1.02
CBWD3-214ENST00000618921 SIK1P57059 783 aa8.65□□□□□ -1.02
CBWD3-214ENST00000618921 HDAC1Q13547 482 aaPredicted RBP8.65□□□□□ -1.02
CBWD3-214ENST00000618921 ATF7IPQ6VMQ6 1270 aa8.65□□□□□ -1.02
CBWD3-214ENST00000618921 SND1Q7KZF4 910 aaKnown RBP eCLIP8.65□□□□□ -1.02
CBWD3-214ENST00000618921 RRAGCQ9HB90 399 aa8.65□□□□□ -1.02
CBWD3-214ENST00000618921 TNNQ9UQP3 1299 aa8.65□□□□□ -1.02
CBWD3-214ENST00000618921 RIPOR2Q9Y4F9 1068 aa8.65□□□□□ -1.02
CBWD3-214ENST00000618921 N4BP2Q86UW6 1770 aaPredicted RBP8.65□□□□□ -1.03
CBWD3-214ENST00000618921 DPEP1P16444 411 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 ITPK1Q13572 414 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 HIC1Q14526 733 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 NFKBIBQ15653 356 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 ZNF579Q8NAF0 562 aaKnown RBP8.64□□□□□ -1.03
CBWD3-214ENST00000618921 SSH1Q8WYL5 1049 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 CHMP4BQ9H444 224 aaKnown RBP8.64□□□□□ -1.03
CBWD3-214ENST00000618921 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 USTQ9Y2C2 406 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 PXDNLA1KZ92 1463 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 TOGARAM1Q9Y4F4 1720 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 PCDH11XQ9BZA7 1347 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 PCDH11YQ9BZA8 1340 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 GRXCR2A6NFK2 248 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 TRIM27P14373 513 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 KCNA3P22001 575 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 HSP90AB2PQ58FF8 381 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 PRDM10Q9NQV6 1147 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 SNRKQ9NRH2 765 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 ASAP1Q9ULH1 1129 aa8.64□□□□□ -1.03
CBWD3-214ENST00000618921 CICQ96RK0 1608 aaPredicted RBP8.64□□□□□ -1.03
CBWD3-214ENST00000618921 ITGB4P16144 1822 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 SLC4A3P48751 1232 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 NFE2L2Q16236 605 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 ITPRIPQ8IWB1 547 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 ANKRD13AQ8IZ07 590 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 NLGN1Q8N2Q7 840 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 POLKQ9UBT6 870 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 NOB1Q9ULX3 412 aaKnown RBP8.63□□□□□ -1.03
CBWD3-214ENST00000618921 PRKAR2BP31323 418 aa8.63□□□□□ -1.03
CBWD3-214ENST00000618921 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms