RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 H0YIN7 160 aa10.63□□□□□ -0.71
NEK3-209ENST00000618856 GPTP24298 496 aa10.63□□□□□ -0.71
NEK3-209ENST00000618856 HOXA10P31260 410 aaPredicted RBP10.63□□□□□ -0.71
NEK3-209ENST00000618856 ERFEQ4G0M1 354 aa10.63□□□□□ -0.71
NEK3-209ENST00000618856 DALRD3Q5D0E6 543 aaKnown RBP10.63□□□□□ -0.71
NEK3-209ENST00000618856 STYK1Q6J9G0 422 aa10.63□□□□□ -0.71
NEK3-209ENST00000618856 CCDC24Q8N4L8 307 aa10.63□□□□□ -0.71
NEK3-209ENST00000618856 ADCY9O60503 1353 aa10.63□□□□□ -0.71
NEK3-209ENST00000618856 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
NEK3-209ENST00000618856 KSR2Q6VAB6 950 aa10.62□□□□□ -0.71
NEK3-209ENST00000618856 G2E3Q7L622 706 aa10.62□□□□□ -0.71
NEK3-209ENST00000618856 PPP1R42Q7Z4L9 355 aa10.62□□□□□ -0.71
NEK3-209ENST00000618856 C7orf43Q8WVR3 580 aa10.62□□□□□ -0.71
NEK3-209ENST00000618856 MASTLQ96GX5 879 aa10.62□□□□□ -0.71
NEK3-209ENST00000618856 SNED1Q8TER0 1413 aa10.61□□□□□ -0.71
NEK3-209ENST00000618856 NPR1P16066 1061 aa10.61□□□□□ -0.71
NEK3-209ENST00000618856 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
NEK3-209ENST00000618856 TTLL6Q8N841 843 aa10.61□□□□□ -0.71
NEK3-209ENST00000618856 CDCA7LQ96GN5 454 aa10.61□□□□□ -0.71
NEK3-209ENST00000618856 METTL22Q9BUU2 404 aaPredicted RBP10.61□□□□□ -0.71
NEK3-209ENST00000618856 UTP14AQ9BVJ6 771 aaKnown RBP10.61□□□□□ -0.71
NEK3-209ENST00000618856 STK31Q9BXU1 1019 aa10.61□□□□□ -0.71
NEK3-209ENST00000618856 BCS1LQ9Y276 419 aa10.61□□□□□ -0.71
NEK3-209ENST00000618856 PI4KAP2A4QPH2 592 aa10.6□□□□□ -0.71
NEK3-209ENST00000618856 DDX58O95786 925 aaKnown RBP10.6□□□□□ -0.71
NEK3-209ENST00000618856 FLIIQ13045 1269 aa10.6□□□□□ -0.71
NEK3-209ENST00000618856 C3orf67Q6ZVT6 689 aa10.6□□□□□ -0.71
NEK3-209ENST00000618856 RIC3Q7Z5B4 369 aa10.6□□□□□ -0.71
NEK3-209ENST00000618856 PELP1Q8IZL8 1130 aaKnown RBP10.6□□□□□ -0.71
NEK3-209ENST00000618856 PI4KAP1Q8N8J0 262 aa10.6□□□□□ -0.71
NEK3-209ENST00000618856 CCDC191Q8NCU4 936 aa10.6□□□□□ -0.71
NEK3-209ENST00000618856 CNKSR1Q969H4 720 aa10.6□□□□□ -0.71
NEK3-209ENST00000618856 ZNF428Q96B54 188 aa10.6□□□□□ -0.71
NEK3-209ENST00000618856 SH3TC1Q8TE82 1336 aa10.59□□□□□ -0.71
NEK3-209ENST00000618856 DDX60Q8IY21 1712 aaKnown RBP10.59□□□□□ -0.71
NEK3-209ENST00000618856 FAM177BA6PVY3 158 aa10.59□□□□□ -0.71
NEK3-209ENST00000618856 TCERG1O14776 1098 aaKnown RBP10.59□□□□□ -0.71
NEK3-209ENST00000618856 IGKV5-2P06315 115 aa10.59□□□□□ -0.71
NEK3-209ENST00000618856 LAMB2P55268 1798 aa10.59□□□□□ -0.71
NEK3-209ENST00000618856 SLX4Q8IY92 1834 aa10.58□□□□□ -0.72
NEK3-209ENST00000618856 ATP5J2-PTCD1G3V325 749 aa10.58□□□□□ -0.72
NEK3-209ENST00000618856 CT47B1P0C2W7 299 aaPredicted RBP10.58□□□□□ -0.72
NEK3-209ENST00000618856 YY1P25490 414 aa10.58□□□□□ -0.72
NEK3-209ENST00000618856 GTF2E1P29083 439 aaPredicted RBP10.58□□□□□ -0.72
NEK3-209ENST00000618856 PRPF40BQ6NWY9 871 aaKnown RBP10.58□□□□□ -0.72
NEK3-209ENST00000618856 SYNE4Q8N205 404 aa10.58□□□□□ -0.72
NEK3-209ENST00000618856 MRPL50Q8N5N7 158 aaKnown RBP10.58□□□□□ -0.72
NEK3-209ENST00000618856 ZBTB38Q8NAP3 1195 aaPredicted RBP10.58□□□□□ -0.72
NEK3-209ENST00000618856 CRAMP1Q96RY5 1269 aa10.58□□□□□ -0.72
NEK3-209ENST00000618856 TRMT112Q9UI30 125 aaKnown RBP10.58□□□□□ -0.72
NEK3-209ENST00000618856 WWC3Q9ULE0 1092 aa10.58□□□□□ -0.72
NEK3-209ENST00000618856 MAP3K2Q9Y2U5 619 aa10.58□□□□□ -0.72
NEK3-209ENST00000618856 LTBP3Q9NS15 1303 aa10.58□□□□□ -0.72
NEK3-209ENST00000618856 FER1L6Q2WGJ9 1857 aa10.57□□□□□ -0.72
NEK3-209ENST00000618856 NFKBIEO00221 500 aa10.57□□□□□ -0.72
NEK3-209ENST00000618856 NPHP1O15259 732 aa10.57□□□□□ -0.72
NEK3-209ENST00000618856 PCCAP05165 728 aaPredicted RBP10.57□□□□□ -0.72
NEK3-209ENST00000618856 ALDH1B1P30837 517 aa10.57□□□□□ -0.72
NEK3-209ENST00000618856 PRELPP51888 382 aa10.57□□□□□ -0.72
NEK3-209ENST00000618856 BRPF1P55201 1214 aaPredicted RBP10.57□□□□□ -0.72
NEK3-209ENST00000618856 SF3B3Q15393 1217 aaKnown RBP10.57□□□□□ -0.72
NEK3-209ENST00000618856 ALDH1L2Q3SY69 923 aa10.57□□□□□ -0.72
NEK3-209ENST00000618856 ZNF622Q969S3 477 aaKnown RBP eCLIP10.57□□□□□ -0.72
NEK3-209ENST00000618856 NLRP3Q96P20 1036 aa10.57□□□□□ -0.72
NEK3-209ENST00000618856 MYD88Q99836 296 aa10.57□□□□□ -0.72
NEK3-209ENST00000618856 SBF1O95248 1867 aa10.56□□□□□ -0.72
NEK3-209ENST00000618856 NEURL1BA8MQ27 555 aa10.56□□□□□ -0.72
NEK3-209ENST00000618856 CASP7P55210 303 aa10.56□□□□□ -0.72
NEK3-209ENST00000618856 SOGA3Q5TF21 947 aa10.56□□□□□ -0.72
NEK3-209ENST00000618856 ARHGAP27Q6ZUM4 889 aa10.56□□□□□ -0.72
NEK3-209ENST00000618856 DNAAF4Q8WXU2 420 aa10.56□□□□□ -0.72
NEK3-209ENST00000618856 SSH1Q8WYL5 1049 aa10.56□□□□□ -0.72
NEK3-209ENST00000618856 FAM89AQ96GI7 184 aa10.56□□□□□ -0.72
NEK3-209ENST00000618856 CWC25Q9NXE8 425 aaPredicted RBP10.56□□□□□ -0.72
NEK3-209ENST00000618856 CDHR2Q9BYE9 1310 aa10.56□□□□□ -0.72
NEK3-209ENST00000618856 H7C1W4 665 aa10.55□□□□□ -0.72
NEK3-209ENST00000618856 C21orf2O43822 256 aa10.55□□□□□ -0.72
NEK3-209ENST00000618856 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
NEK3-209ENST00000618856 FKBP5Q13451 457 aaPredicted RBP10.55□□□□□ -0.72
NEK3-209ENST00000618856 BEND3Q5T5X7 828 aa10.55□□□□□ -0.72
NEK3-209ENST00000618856 LINS1Q8NG48 757 aa10.55□□□□□ -0.72
NEK3-209ENST00000618856 ZBED9Q6R2W3 1325 aa10.55□□□□□ -0.72
NEK3-209ENST00000618856 IRS4O14654 1257 aaPredicted RBP10.54□□□□□ -0.72
NEK3-209ENST00000618856 NEXNQ0ZGT2 675 aa10.54□□□□□ -0.72
NEK3-209ENST00000618856 GCKRQ14397 625 aa10.54□□□□□ -0.72
NEK3-209ENST00000618856 CWF19L2Q2TBE0 894 aaKnown RBP10.54□□□□□ -0.72
NEK3-209ENST00000618856 CC2D2BQ6DHV5 1058 aa10.54□□□□□ -0.72
NEK3-209ENST00000618856 ZNF784Q8NCA9 323 aaPredicted RBP10.54□□□□□ -0.72
NEK3-209ENST00000618856 RBM17Q96I25 401 aaKnown RBP10.54□□□□□ -0.72
NEK3-209ENST00000618856 ABCC4O15439 1325 aa10.54□□□□□ -0.72
NEK3-209ENST00000618856 PTPRCP08575 1304 aa10.54□□□□□ -0.72
NEK3-209ENST00000618856 ZC3H4Q9UPT8 1303 aaKnown RBP10.54□□□□□ -0.72
NEK3-209ENST00000618856 COL4A1P02462 1669 aa10.53□□□□□ -0.72
NEK3-209ENST00000618856 RTL9Q8NET4 1388 aa10.53□□□□□ -0.72
NEK3-209ENST00000618856 CACNA1SQ13698 1873 aa10.53□□□□□ -0.72
NEK3-209ENST00000618856 LRRC37AA6NMS7 1700 aa10.53□□□□□ -0.72
NEK3-209ENST00000618856 BBOX1O75936 387 aa10.53□□□□□ -0.72
NEK3-209ENST00000618856 HSP90B1P14625 803 aaKnown RBP10.53□□□□□ -0.72
NEK3-209ENST00000618856 LMNB1P20700 586 aa10.53□□□□□ -0.72
NEK3-209ENST00000618856 HNRNPUQ00839 825 aaKnown RBP eCLIP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms