RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 SPAG1Q07617 926 aa18.77■□□□□ 0.6
CNTNAP3B-214ENST00000618777 SYT10Q6XYQ8 523 aa18.77■□□□□ 0.6
CNTNAP3B-214ENST00000618777 ICE2Q659A1 982 aa18.77■□□□□ 0.6
CNTNAP3B-214ENST00000618777 RASAL2Q9UJF2 1139 aa18.77■□□□□ 0.6
CNTNAP3B-214ENST00000618777 NDUFAB1O14561 156 aa18.77■□□□□ 0.6
CNTNAP3B-214ENST00000618777 PTGS1P23219 599 aa18.77■□□□□ 0.6
CNTNAP3B-214ENST00000618777 CTNNA2P26232 953 aa18.77■□□□□ 0.6
CNTNAP3B-214ENST00000618777 SH2D4BQ5SQS7 431 aa18.76■□□□□ 0.59
CNTNAP3B-214ENST00000618777 PLVAPQ9BX97 442 aa18.76■□□□□ 0.59
CNTNAP3B-214ENST00000618777 NKTRP30414 1462 aaKnown RBP18.76■□□□□ 0.59
CNTNAP3B-214ENST00000618777 USP48Q86UV5 1035 aa18.76■□□□□ 0.59
CNTNAP3B-214ENST00000618777 VCXQ9H320 206 aa18.76■□□□□ 0.59
CNTNAP3B-214ENST00000618777 CABP2Q9NPB3 220 aa18.76■□□□□ 0.59
CNTNAP3B-214ENST00000618777 SELENOSQ9BQE4 189 aa18.76■□□□□ 0.59
CNTNAP3B-214ENST00000618777 RAB34Q9BZG1 259 aa18.76■□□□□ 0.59
CNTNAP3B-214ENST00000618777 IQCGQ9H095 443 aaKnown RBP18.76■□□□□ 0.59
CNTNAP3B-214ENST00000618777 ANKRD30BQ9BXX2 1392 aa18.76■□□□□ 0.59
CNTNAP3B-214ENST00000618777 MYO1BO43795 1136 aa18.75■□□□□ 0.59
CNTNAP3B-214ENST00000618777 OAS2P29728 719 aaKnown RBP18.75■□□□□ 0.59
CNTNAP3B-214ENST00000618777 EVCP57679 992 aa18.75■□□□□ 0.59
CNTNAP3B-214ENST00000618777 ALDH1L2Q3SY69 923 aa18.75■□□□□ 0.59
CNTNAP3B-214ENST00000618777 PPP2R3AQ06190 1150 aa18.75■□□□□ 0.59
CNTNAP3B-214ENST00000618777 TMX3Q96JJ7 454 aa18.75■□□□□ 0.59
CNTNAP3B-214ENST00000618777 ELF2Q15723 593 aa18.75■□□□□ 0.59
CNTNAP3B-214ENST00000618777 TRIM21P19474 475 aaKnown RBP18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 KRT83P78385 493 aa18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 CFAP58Q5T655 872 aa18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 KRT86O43790 486 aa18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 RAB3GAP1Q15042 981 aa18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 SREK1Q8WXA9 508 aaKnown RBP18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 STMN2Q93045 179 aa18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 TRIM7Q9C029 511 aa18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 GOLGA5Q8TBA6 731 aa18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 TSNAXIP1Q2TAA8 658 aa18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 ANAPC4Q9UJX5 808 aa18.74■□□□□ 0.59
CNTNAP3B-214ENST00000618777 TSC1Q92574 1164 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 PPP1R12CQ9BZL4 782 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 DNAJC25Q9H1X3 360 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 CEP126Q9P2H0 1117 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 RHOXF2BP0C7M4 288 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 SH3BGRP55822 239 aaPredicted RBP18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 NEK11Q8NG66 645 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 CCDC110Q8TBZ0 833 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 RHOXF2Q9BQY4 288 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 SMARCA5O60264 1052 aaPredicted RBP18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 CETN1Q12798 172 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 AOPEPQ8N6M6 819 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 TYRO3Q06418 890 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 CCDC40Q4G0X9 1142 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 CEP85LQ5SZL2 805 aa18.73■□□□□ 0.59
CNTNAP3B-214ENST00000618777 AMPD3Q01432 767 aa18.72■□□□□ 0.59
CNTNAP3B-214ENST00000618777 CEP128Q6ZU80 1094 aa18.72■□□□□ 0.59
CNTNAP3B-214ENST00000618777 PUF60Q9UHX1 559 aaKnown RBP18.72■□□□□ 0.59
CNTNAP3B-214ENST00000618777 RBSNQ9H1K0 784 aa18.72■□□□□ 0.59
CNTNAP3B-214ENST00000618777 CNPY2Q9Y2B0 182 aa18.72■□□□□ 0.59
CNTNAP3B-214ENST00000618777 KIF1CO43896 1103 aaKnown RBP18.72■□□□□ 0.59
CNTNAP3B-214ENST00000618777 DACT1Q9NYF0 836 aa18.72■□□□□ 0.59
CNTNAP3B-214ENST00000618777 PLEKHO1Q53GL0 409 aaPredicted RBP18.72■□□□□ 0.59
CNTNAP3B-214ENST00000618777 ZNF365Q70YC5 407 aa18.72■□□□□ 0.59
CNTNAP3B-214ENST00000618777 SYKP43405 635 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 TSNARE1Q96NA8 513 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 BIRC2Q13490 618 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 ISM2Q6H9L7 571 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 CEP120Q8N960 986 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 GBP1P32455 592 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 KIF5AQ12840 1032 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 SMC5Q8IY18 1101 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 RRP15Q9Y3B9 282 aaKnown RBP18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 ATP2B2Q01814 1243 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 TUBB2AQ13885 445 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 KIF6Q6ZMV9 814 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 TUBB2BQ9BVA1 445 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 FAM114A2Q9NRY5 505 aa18.71■□□□□ 0.59
CNTNAP3B-214ENST00000618777 RFC1P35251 1148 aaPredicted RBP18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 PRPHP41219 470 aa18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 C8orf34Q49A92 452 aa18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 INTS8Q75QN2 995 aaKnown RBP18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 NUCKS1Q9H1E3 243 aaKnown RBP18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 CCDC38Q502W7 563 aa18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 DDX54Q8TDD1 881 aaKnown RBP18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 SYTL4Q96C24 671 aaPredicted RBP18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 RMND1Q9NWS8 449 aa18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ALDH3A1P30838 453 aa18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 VCX3BQ9H321 246 aa18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 CWC25Q9NXE8 425 aaPredicted RBP18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 TMEM266Q2M3C6 531 aa18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 CCDC97Q96F63 343 aaPredicted RBP18.7■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ZNF76P36508 570 aa18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 PSME1Q06323 249 aa18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 SSH1Q8WYL5 1049 aa18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 MRPS27Q92552 414 aaKnown RBP18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ZMAT2Q96NC0 199 aaKnown RBP18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 CUX1P39880 1505 aa18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 GIGYF1O75420 1035 aaPredicted RBP18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ACTN2P35609 894 aa18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 NEDD9Q14511 834 aa18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 KCNG4Q8TDN1 519 aa18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 AIDAQ96BJ3 306 aa18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 RPGRIP1LQ68CZ1 1315 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms