RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 IBTKQ9P2D0 1353 aaPredicted RBP28.68■■■□□ 2.18
SYNGR3-206ENST00000618464 NTSR2O95665 410 aa28.68■■■□□ 2.18
SYNGR3-206ENST00000618464 HOXB7P09629 217 aa28.68■■■□□ 2.18
SYNGR3-206ENST00000618464 TAOK3Q9H2K8 898 aa28.68■■■□□ 2.18
SYNGR3-206ENST00000618464 LTBP3Q9NS15 1303 aa28.68■■■□□ 2.18
SYNGR3-206ENST00000618464 DICER1Q9UPY3 1922 aaKnown RBP28.67■■■□□ 2.18
SYNGR3-206ENST00000618464 GNAI1P63096 354 aa28.67■■■□□ 2.18
SYNGR3-206ENST00000618464 DPY19L2Q6NUT2 758 aa28.67■■■□□ 2.18
SYNGR3-206ENST00000618464 PARP10Q53GL7 1025 aa28.66■■■□□ 2.18
SYNGR3-206ENST00000618464 SOGA3Q5TF21 947 aa28.66■■■□□ 2.18
SYNGR3-206ENST00000618464 PPP1R42Q7Z4L9 355 aa28.66■■■□□ 2.18
SYNGR3-206ENST00000618464 C7orf43Q8WVR3 580 aa28.66■■■□□ 2.18
SYNGR3-206ENST00000618464 ELL2O00472 640 aaPredicted RBP28.64■■■□□ 2.18
SYNGR3-206ENST00000618464 OLFM4Q6UX06 510 aa28.64■■■□□ 2.18
SYNGR3-206ENST00000618464 KLRG1Q96E93 195 aa28.64■■■□□ 2.18
SYNGR3-206ENST00000618464 DBF4Q9UBU7 674 aaPredicted RBP28.64■■■□□ 2.18
SYNGR3-206ENST00000618464 CRY2Q49AN0 593 aa28.63■■■□□ 2.17
SYNGR3-206ENST00000618464 CCDC93Q567U6 631 aa28.63■■■□□ 2.17
SYNGR3-206ENST00000618464 RPGRQ92834 1020 aaKnown RBP28.63■■■□□ 2.17
SYNGR3-206ENST00000618464 UTP14AQ9BVJ6 771 aaKnown RBP28.63■■■□□ 2.17
SYNGR3-206ENST00000618464 ANKRD36CQ5JPF3 1778 aa28.62■■■□□ 2.17
SYNGR3-206ENST00000618464 ALDH1B1P30837 517 aa28.62■■■□□ 2.17
SYNGR3-206ENST00000618464 HSP90AB3PQ58FF7 597 aa28.62■■■□□ 2.17
SYNGR3-206ENST00000618464 ZNF428Q96B54 188 aa28.62■■■□□ 2.17
SYNGR3-206ENST00000618464 RIC1Q4ADV7 1423 aa28.61■■■□□ 2.17
SYNGR3-206ENST00000618464 C3orf67Q6ZVT6 689 aa28.61■■■□□ 2.17
SYNGR3-206ENST00000618464 DDNO94850 711 aaPredicted RBP28.6■■■□□ 2.17
SYNGR3-206ENST00000618464 TCIRG1Q13488 830 aa28.6■■■□□ 2.17
SYNGR3-206ENST00000618464 NLRP10Q86W26 655 aa28.6■■■□□ 2.17
SYNGR3-206ENST00000618464 C8orf58Q8NAV2 365 aa28.59■■■□□ 2.17
SYNGR3-206ENST00000618464 HYPKQ9NX55 129 aa28.59■■■□□ 2.17
SYNGR3-206ENST00000618464 JMYQ8N9B5 988 aa28.58■■■□□ 2.17
SYNGR3-206ENST00000618464 PLBD2Q8NHP8 589 aa28.58■■■□□ 2.17
SYNGR3-206ENST00000618464 ANKRD13DQ6ZTN6 518 aa28.57■■■□□ 2.16
SYNGR3-206ENST00000618464 SYNE4Q8N205 404 aa28.57■■■□□ 2.16
SYNGR3-206ENST00000618464 TSR2Q969E8 191 aaKnown RBP28.57■■■□□ 2.16
SYNGR3-206ENST00000618464 FKBP4Q02790 459 aaKnown RBP eCLIP28.56■■■□□ 2.16
SYNGR3-206ENST00000618464 WWC1Q8IX03 1113 aa28.56■■■□□ 2.16
SYNGR3-206ENST00000618464 RBM17Q96I25 401 aaKnown RBP28.56■■■□□ 2.16
SYNGR3-206ENST00000618464 NLRP3Q96P20 1036 aa28.56■■■□□ 2.16
SYNGR3-206ENST00000618464 HOXA10P31260 410 aaPredicted RBP28.55■■■□□ 2.16
SYNGR3-206ENST00000618464 CCDC27Q2M243 656 aa28.55■■■□□ 2.16
SYNGR3-206ENST00000618464 RTKN2Q8IZC4 609 aa28.55■■■□□ 2.16
SYNGR3-206ENST00000618464 ZNF277Q9NRM2 450 aaPredicted RBP28.55■■■□□ 2.16
SYNGR3-206ENST00000618464 TRMT112Q9UI30 125 aaKnown RBP28.55■■■□□ 2.16
SYNGR3-206ENST00000618464 HCLS1P14317 486 aaPredicted RBP28.54■■■□□ 2.16
SYNGR3-206ENST00000618464 SLC10A5Q5PT55 438 aa28.54■■■□□ 2.16
SYNGR3-206ENST00000618464 SALL2Q9Y467 1007 aaPredicted RBP28.54■■■□□ 2.16
SYNGR3-206ENST00000618464 RNF123Q5XPI4 1314 aa28.53■■■□□ 2.16
SYNGR3-206ENST00000618464 ATP5J2-PTCD1G3V325 749 aa28.53■■■□□ 2.16
SYNGR3-206ENST00000618464 TCERG1O14776 1098 aaKnown RBP28.53■■■□□ 2.16
SYNGR3-206ENST00000618464 POTEIP0CG38 1075 aa28.53■■■□□ 2.16
SYNGR3-206ENST00000618464 POTEJP0CG39 1038 aa28.53■■■□□ 2.16
SYNGR3-206ENST00000618464 SLC51AQ86UW1 340 aa28.53■■■□□ 2.16
SYNGR3-206ENST00000618464 TSPYL6Q8N831 410 aa28.53■■■□□ 2.16
SYNGR3-206ENST00000618464 CRAMP1Q96RY5 1269 aa28.53■■■□□ 2.16
SYNGR3-206ENST00000618464 PHAXQ9H814 394 aaKnown RBP28.53■■■□□ 2.16
SYNGR3-206ENST00000618464 SH3TC1Q8TE82 1336 aa28.51■■■□□ 2.15
SYNGR3-206ENST00000618464 PPEF1O14829 653 aaPredicted RBP28.51■■■□□ 2.15
SYNGR3-206ENST00000618464 GOLGA2Q08379 1002 aa28.5■■■□□ 2.15
SYNGR3-206ENST00000618464 RIC3Q7Z5B4 369 aa28.5■■■□□ 2.15
SYNGR3-206ENST00000618464 ISCA1Q9BUE6 129 aa28.5■■■□□ 2.15
SYNGR3-206ENST00000618464 CCDC30Q5VVM6 783 aa28.49■■■□□ 2.15
SYNGR3-206ENST00000618464 FAM9BQ8IZU0 186 aa28.49■■■□□ 2.15
SYNGR3-206ENST00000618464 LAMB2P55268 1798 aa28.49■■■□□ 2.15
SYNGR3-206ENST00000618464 ZNF541Q9H0D2 1346 aa28.48■■■□□ 2.15
SYNGR3-206ENST00000618464 CHADLQ6NUI6 762 aa28.48■■■□□ 2.15
SYNGR3-206ENST00000618464 SNED1Q8TER0 1413 aa28.48■■■□□ 2.15
SYNGR3-206ENST00000618464 ABCC4O15439 1325 aa28.47■■■□□ 2.15
SYNGR3-206ENST00000618464 IARSP41252 1262 aaKnown RBP28.47■■■□□ 2.15
SYNGR3-206ENST00000618464 CC2D2BQ6DHV5 1058 aa28.47■■■□□ 2.15
SYNGR3-206ENST00000618464 L3MBTL3Q96JM7 780 aaPredicted RBP28.47■■■□□ 2.15
SYNGR3-206ENST00000618464 RTL5Q5HYW3 569 aaPredicted RBP28.46■■■□□ 2.15
SYNGR3-206ENST00000618464 FAM89AQ96GI7 184 aa28.46■■■□□ 2.15
SYNGR3-206ENST00000618464 IL16Q14005 1332 aa28.45■■■□□ 2.15
SYNGR3-206ENST00000618464 PSMD1Q99460 953 aa28.45■■■□□ 2.14
SYNGR3-206ENST00000618464 TAF1DQ9H5J8 278 aaPredicted RBP28.45■■■□□ 2.14
SYNGR3-206ENST00000618464 PCNTO95613 3336 aa28.44■■■□□ 2.14
SYNGR3-206ENST00000618464 IQCA1LA6NCM1 817 aa28.44■■■□□ 2.14
SYNGR3-206ENST00000618464 MYD88Q99836 296 aa28.44■■■□□ 2.14
SYNGR3-206ENST00000618464 TWISTNBQ3B726 338 aaPredicted RBP28.43■■■□□ 2.14
SYNGR3-206ENST00000618464 NCBP3Q53F19 620 aaKnown RBP28.43■■■□□ 2.14
SYNGR3-206ENST00000618464 CHMP4AQ9BY43 222 aa28.43■■■□□ 2.14
SYNGR3-206ENST00000618464 DDX60Q8IY21 1712 aaKnown RBP28.43■■■□□ 2.14
SYNGR3-206ENST00000618464 SCN4AP35499 1836 aa28.42■■■□□ 2.14
SYNGR3-206ENST00000618464 FZD9O00144 591 aa28.42■■■□□ 2.14
SYNGR3-206ENST00000618464 DDX46Q7L014 1031 aaKnown RBP28.42■■■□□ 2.14
SYNGR3-206ENST00000618464 TMX4Q9H1E5 349 aaPredicted RBP28.42■■■□□ 2.14
SYNGR3-206ENST00000618464 ATP6V0A2Q9Y487 856 aa28.42■■■□□ 2.14
SYNGR3-206ENST00000618464 FANCIQ9NVI1 1328 aa28.42■■■□□ 2.14
SYNGR3-206ENST00000618464 TRIM28Q13263 835 aaKnown RBP28.41■■■□□ 2.14
SYNGR3-206ENST00000618464 STK31Q9BXU1 1019 aa28.41■■■□□ 2.14
SYNGR3-206ENST00000618464 DDX58O95786 925 aaKnown RBP28.4■■■□□ 2.14
SYNGR3-206ENST00000618464 GRIPAP1Q4V328 841 aa28.4■■■□□ 2.14
SYNGR3-206ENST00000618464 COL13A1Q5TAT6 717 aaPredicted RBP28.4■■■□□ 2.14
SYNGR3-206ENST00000618464 LDHDQ86WU2 507 aa28.39■■■□□ 2.14
SYNGR3-206ENST00000618464 WDR63Q8IWG1 891 aa28.39■■■□□ 2.14
SYNGR3-206ENST00000618464 TAF1P21675 1872 aa28.38■■■□□ 2.13
SYNGR3-206ENST00000618464 IRS4O14654 1257 aaPredicted RBP28.38■■■□□ 2.13
SYNGR3-206ENST00000618464 BBOX1O75936 387 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms