RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 GJA3Q9Y6H8 435 aa10.53□□□□□ -0.72
CBWD1-227ENST00000618361 TRAF5O00463 557 aa10.52□□□□□ -0.73
CBWD1-227ENST00000618361 DIAPH1O60610 1272 aaKnown RBP10.52□□□□□ -0.73
CBWD1-227ENST00000618361 FMR1Q06787 632 aaKnown RBP eCLIP10.52□□□□□ -0.73
CBWD1-227ENST00000618361 NOGQ13253 232 aa10.52□□□□□ -0.73
CBWD1-227ENST00000618361 PGAP2Q9UHJ9 254 aa10.52□□□□□ -0.73
CBWD1-227ENST00000618361 LTBP1Q14766 1721 aa10.52□□□□□ -0.73
CBWD1-227ENST00000618361 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.73
CBWD1-227ENST00000618361 AMER1Q5JTC6 1135 aaPredicted RBP10.51□□□□□ -0.73
CBWD1-227ENST00000618361 LARGE2Q8N3Y3 721 aa10.51□□□□□ -0.73
CBWD1-227ENST00000618361 ZC3H15Q8WU90 426 aaKnown RBP10.51□□□□□ -0.73
CBWD1-227ENST00000618361 GCC1Q96CN9 775 aa10.51□□□□□ -0.73
CBWD1-227ENST00000618361 GPRC5DQ9NZD1 345 aa10.51□□□□□ -0.73
CBWD1-227ENST00000618361 USP16Q9Y5T5 823 aa10.51□□□□□ -0.73
CBWD1-227ENST00000618361 KIF7Q2M1P5 1343 aa10.51□□□□□ -0.73
CBWD1-227ENST00000618361 BCORQ6W2J9 1755 aa10.5□□□□□ -0.73
CBWD1-227ENST00000618361 BTBD11A6QL63 1104 aa10.5□□□□□ -0.73
CBWD1-227ENST00000618361 CELF2O95319 508 aaKnown RBP10.5□□□□□ -0.73
CBWD1-227ENST00000618361 SNRPA1P09661 255 aaKnown RBP10.5□□□□□ -0.73
CBWD1-227ENST00000618361 GTF2E1P29083 439 aaPredicted RBP10.5□□□□□ -0.73
CBWD1-227ENST00000618361 HOXA10P31260 410 aaPredicted RBP10.5□□□□□ -0.73
CBWD1-227ENST00000618361 NIM1KQ8IY84 436 aa10.5□□□□□ -0.73
CBWD1-227ENST00000618361 NYXQ9GZU5 481 aa10.5□□□□□ -0.73
CBWD1-227ENST00000618361 SAGE1Q9NXZ1 904 aa10.5□□□□□ -0.73
CBWD1-227ENST00000618361 CDHR2Q9BYE9 1310 aa10.5□□□□□ -0.73
CBWD1-227ENST00000618361 EIF4G2P78344 907 aaKnown RBP eCLIP10.49□□□□□ -0.73
CBWD1-227ENST00000618361 CIAPIN1Q6FI81 312 aa10.49□□□□□ -0.73
CBWD1-227ENST00000618361 CRAMP1Q96RY5 1269 aa10.49□□□□□ -0.73
CBWD1-227ENST00000618361 RIC1Q4ADV7 1423 aa10.49□□□□□ -0.73
CBWD1-227ENST00000618361 COL4A5P29400 1685 aa10.48□□□□□ -0.73
CBWD1-227ENST00000618361 KCNQ3O43525 872 aa10.48□□□□□ -0.73
CBWD1-227ENST00000618361 CDC37L1Q7L3B6 337 aa10.48□□□□□ -0.73
CBWD1-227ENST00000618361 NBPF15Q8N660 670 aa10.48□□□□□ -0.73
CBWD1-227ENST00000618361 TMX4Q9H1E5 349 aaPredicted RBP10.48□□□□□ -0.73
CBWD1-227ENST00000618361 PDE4DIPQ5VU43 2346 aa10.48□□□□□ -0.73
CBWD1-227ENST00000618361 CACNA1SQ13698 1873 aa10.48□□□□□ -0.73
CBWD1-227ENST00000618361 NBPF26B4DH59 902 aa10.47□□□□□ -0.73
CBWD1-227ENST00000618361 ERVV-1B6SEH8 477 aa10.47□□□□□ -0.73
CBWD1-227ENST00000618361 SOX10P56693 466 aa10.47□□□□□ -0.73
CBWD1-227ENST00000618361 NBPF10Q6P3W6 841 aaKnown RBP10.47□□□□□ -0.73
CBWD1-227ENST00000618361 SUPT20HQ8NEM7 779 aa10.47□□□□□ -0.73
CBWD1-227ENST00000618361 RPGRQ92834 1020 aaKnown RBP10.47□□□□□ -0.73
CBWD1-227ENST00000618361 GLIS2Q9BZE0 524 aaPredicted RBP10.47□□□□□ -0.73
CBWD1-227ENST00000618361 ZNRF3Q9ULT6 936 aa10.47□□□□□ -0.73
CBWD1-227ENST00000618361 IBTKQ9P2D0 1353 aaPredicted RBP10.47□□□□□ -0.73
CBWD1-227ENST00000618361 FAM177BA6PVY3 158 aa10.46□□□□□ -0.73
CBWD1-227ENST00000618361 PPIP5K2O43314 1243 aa10.46□□□□□ -0.73
CBWD1-227ENST00000618361 PIP4K2AP48426 406 aaPredicted RBP10.46□□□□□ -0.73
CBWD1-227ENST00000618361 HLFQ16534 295 aa10.46□□□□□ -0.73
CBWD1-227ENST00000618361 RBM17Q96I25 401 aaKnown RBP10.46□□□□□ -0.73
CBWD1-227ENST00000618361 RTFDC1Q9BY42 306 aaPredicted RBP10.46□□□□□ -0.73
CBWD1-227ENST00000618361 NPC1L1Q9UHC9 1359 aa10.46□□□□□ -0.74
CBWD1-227ENST00000618361 SIPA1L3O60292 1781 aaPredicted RBP10.46□□□□□ -0.74
CBWD1-227ENST00000618361 TRPM7Q96QT4 1865 aa10.46□□□□□ -0.74
CBWD1-227ENST00000618361 ABCC12Q96J65 1359 aa10.45□□□□□ -0.74
CBWD1-227ENST00000618361 PRAMEF22A3QJZ6 481 aa10.45□□□□□ -0.74
CBWD1-227ENST00000618361 PPEF1O14829 653 aaPredicted RBP10.45□□□□□ -0.74
CBWD1-227ENST00000618361 HSPA5P11021 654 aaKnown RBP10.45□□□□□ -0.74
CBWD1-227ENST00000618361 CXCL9Q07325 125 aa10.45□□□□□ -0.74
CBWD1-227ENST00000618361 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
CBWD1-227ENST00000618361 FAM155AB1AL88 458 aaPredicted RBP10.44□□□□□ -0.74
CBWD1-227ENST00000618361 GMPSP49915 693 aaPredicted RBP10.44□□□□□ -0.74
CBWD1-227ENST00000618361 HIRAP54198 1017 aaPredicted RBP10.44□□□□□ -0.74
CBWD1-227ENST00000618361 HUNKP57058 714 aa10.44□□□□□ -0.74
CBWD1-227ENST00000618361 TNIP1Q15025 636 aa10.44□□□□□ -0.74
CBWD1-227ENST00000618361 AOC3Q16853 763 aa10.44□□□□□ -0.74
CBWD1-227ENST00000618361 RGMBQ6NW40 437 aa10.44□□□□□ -0.74
CBWD1-227ENST00000618361 NUTM1Q86Y26 1132 aa10.44□□□□□ -0.74
CBWD1-227ENST00000618361 REM2Q8IYK8 340 aaPredicted RBP10.44□□□□□ -0.74
CBWD1-227ENST00000618361 ZNF408Q9H9D4 720 aa10.44□□□□□ -0.74
CBWD1-227ENST00000618361 ATP6V0A2Q9Y487 856 aa10.44□□□□□ -0.74
CBWD1-227ENST00000618361 MAP3K15Q6ZN16 1313 aa10.43□□□□□ -0.74
CBWD1-227ENST00000618361 CLSPNQ9HAW4 1339 aa10.43□□□□□ -0.74
CBWD1-227ENST00000618361 U2SURPO15042 1029 aaKnown RBP10.43□□□□□ -0.74
CBWD1-227ENST00000618361 HTATSF1O43719 755 aaKnown RBP10.43□□□□□ -0.74
CBWD1-227ENST00000618361 PKN2Q16513 984 aaKnown RBP10.43□□□□□ -0.74
CBWD1-227ENST00000618361 ZIC5Q96T25 663 aa10.43□□□□□ -0.74
CBWD1-227ENST00000618361 COL3A1P02461 1466 aaPredicted RBP10.42□□□□□ -0.74
CBWD1-227ENST00000618361 H7C1D1 291 aa10.42□□□□□ -0.74
CBWD1-227ENST00000618361 PER1O15534 1290 aaPredicted RBP10.42□□□□□ -0.74
CBWD1-227ENST00000618361 KIAA2012Q0VF49 1180 aa10.42□□□□□ -0.74
CBWD1-227ENST00000618361 CTU1Q7Z7A3 348 aaKnown RBP10.42□□□□□ -0.74
CBWD1-227ENST00000618361 RTF1Q92541 710 aaKnown RBP10.42□□□□□ -0.74
CBWD1-227ENST00000618361 NLRP3Q96P20 1036 aa10.42□□□□□ -0.74
CBWD1-227ENST00000618361 BCL2L13Q9BXK5 485 aa10.42□□□□□ -0.74
CBWD1-227ENST00000618361 RNF186Q9NXI6 227 aa10.42□□□□□ -0.74
CBWD1-227ENST00000618361 TNRC18O15417 2968 aaPredicted RBP10.42□□□□□ -0.74
CBWD1-227ENST00000618361 CASP8AP2Q9UKL3 1982 aa10.41□□□□□ -0.74
CBWD1-227ENST00000618361 TRPA1O75762 1119 aa10.41□□□□□ -0.74
CBWD1-227ENST00000618361 BBOX1O75936 387 aa10.41□□□□□ -0.74
CBWD1-227ENST00000618361 KIF23Q02241 960 aaPredicted RBP10.41□□□□□ -0.74
CBWD1-227ENST00000618361 SLC10A5Q5PT55 438 aa10.41□□□□□ -0.74
CBWD1-227ENST00000618361 SUSD4Q5VX71 490 aa10.41□□□□□ -0.74
CBWD1-227ENST00000618361 KIF6Q6ZMV9 814 aa10.41□□□□□ -0.74
CBWD1-227ENST00000618361 C2orf69Q8N8R5 385 aa10.41□□□□□ -0.74
CBWD1-227ENST00000618361 TRPM4Q8TD43 1214 aa10.41□□□□□ -0.74
CBWD1-227ENST00000618361 DPF2Q92785 391 aa10.41□□□□□ -0.74
CBWD1-227ENST00000618361 PHACTR3Q96KR7 559 aa10.41□□□□□ -0.74
CBWD1-227ENST00000618361 GBA2Q9HCG7 927 aaPredicted RBP10.41□□□□□ -0.74
CBWD1-227ENST00000618361 CNOT7Q9UIV1 285 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms