RNA–Protein interactions for RNA: ENST00000618229.4

SURF4-209, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 3,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-209ENST00000618229 VPS53Q5VIR6 699 aa19.38■□□□□ 0.69
SURF4-209ENST00000618229 LEO1Q8WVC0 666 aaPredicted RBP19.38■□□□□ 0.69
SURF4-209ENST00000618229 MYO5BQ9ULV0 1848 aa19.38■□□□□ 0.69
SURF4-209ENST00000618229 REREQ9P2R6 1566 aa19.38■□□□□ 0.69
SURF4-209ENST00000618229 FAM177A1Q8N128 213 aaPredicted RBP19.38■□□□□ 0.69
SURF4-209ENST00000618229 GTF3C6Q969F1 213 aa19.38■□□□□ 0.69
SURF4-209ENST00000618229 LMTK2Q8IWU2 1503 aa19.38■□□□□ 0.69
SURF4-209ENST00000618229 PTPN21Q16825 1174 aa19.38■□□□□ 0.69
SURF4-209ENST00000618229 TMX1Q9H3N1 280 aa19.38■□□□□ 0.69
SURF4-209ENST00000618229 C11orf57Q6ZUT1 292 aaPredicted RBP19.37■□□□□ 0.69
SURF4-209ENST00000618229 PIK3C2BO00750 1634 aa19.37■□□□□ 0.69
SURF4-209ENST00000618229 ZSCAN31Q96LW9 406 aaPredicted RBP19.37■□□□□ 0.69
SURF4-209ENST00000618229 CRB1P82279 1406 aa19.37■□□□□ 0.69
SURF4-209ENST00000618229 BIN1O00499 593 aa19.36■□□□□ 0.69
SURF4-209ENST00000618229 BRF1Q92994 677 aa19.36■□□□□ 0.69
SURF4-209ENST00000618229 SH2B1Q9NRF2 756 aaPredicted RBP19.36■□□□□ 0.69
SURF4-209ENST00000618229 ECHDC1Q9NTX5 307 aa19.36■□□□□ 0.69
SURF4-209ENST00000618229 TLR7Q9NYK1 1049 aaKnown RBP19.36■□□□□ 0.69
SURF4-209ENST00000618229 CCT2P78371 535 aaKnown RBP19.36■□□□□ 0.69
SURF4-209ENST00000618229 PGBD1Q96JS3 809 aa19.36■□□□□ 0.69
SURF4-209ENST00000618229 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.36■□□□□ 0.69
SURF4-209ENST00000618229 FRMPD1Q5SYB0 1578 aa19.36■□□□□ 0.69
SURF4-209ENST00000618229 A0A0D9SFI3 127 aa19.36■□□□□ 0.69
SURF4-209ENST00000618229 CTIFO43310 598 aaKnown RBP19.36■□□□□ 0.69
SURF4-209ENST00000618229 KIF20BQ96Q89 1820 aa19.36■□□□□ 0.69
SURF4-209ENST00000618229 CCDC129Q6ZRS4 1044 aa19.35■□□□□ 0.69
SURF4-209ENST00000618229 DNAAF4Q8WXU2 420 aa19.35■□□□□ 0.69
SURF4-209ENST00000618229 GPATCH3Q96I76 525 aa19.35■□□□□ 0.69
SURF4-209ENST00000618229 SSH2Q76I76 1423 aa19.35■□□□□ 0.69
SURF4-209ENST00000618229 CCDC171Q6TFL3 1326 aa19.35■□□□□ 0.69
SURF4-209ENST00000618229 CCDC69A6NI79 296 aa19.35■□□□□ 0.69
SURF4-209ENST00000618229 KMT5BQ4FZB7 885 aa19.35■□□□□ 0.69
SURF4-209ENST00000618229 ZSWIM6Q9HCJ5 1215 aa19.35■□□□□ 0.69
SURF4-209ENST00000618229 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
SURF4-209ENST00000618229 SLC27A2O14975 620 aa19.34■□□□□ 0.69
SURF4-209ENST00000618229 SCAND2PQ9GZW5 306 aaPredicted RBP19.34■□□□□ 0.69
SURF4-209ENST00000618229 LGR6Q9HBX8 967 aa19.34■□□□□ 0.69
SURF4-209ENST00000618229 ALKQ9UM73 1620 aa19.34■□□□□ 0.69
SURF4-209ENST00000618229 SMC2O95347 1197 aa19.34■□□□□ 0.69
SURF4-209ENST00000618229 ZRSR1Q15695 479 aaKnown RBP19.34■□□□□ 0.69
SURF4-209ENST00000618229 DNAJC2Q99543 621 aaKnown RBP19.34■□□□□ 0.69
SURF4-209ENST00000618229 FEZ1Q99689 392 aa19.34■□□□□ 0.69
SURF4-209ENST00000618229 ATP7BP35670 1465 aa19.34■□□□□ 0.69
SURF4-209ENST00000618229 POLR3GO15318 223 aaPredicted RBP19.34■□□□□ 0.69
SURF4-209ENST00000618229 CHST3Q7LGC8 479 aa19.34■□□□□ 0.69
SURF4-209ENST00000618229 HOMER1Q86YM7 354 aa19.34■□□□□ 0.69
SURF4-209ENST00000618229 AATKQ6ZMQ8 1374 aa19.33■□□□□ 0.69
SURF4-209ENST00000618229 PDCP20941 246 aa19.33■□□□□ 0.69
SURF4-209ENST00000618229 ARAP3Q8WWN8 1544 aa19.33■□□□□ 0.68
SURF4-209ENST00000618229 ME1P48163 572 aa19.33■□□□□ 0.68
SURF4-209ENST00000618229 RAB11FIP4Q86YS3 637 aa19.33■□□□□ 0.68
SURF4-209ENST00000618229 PLCD3Q8N3E9 789 aa19.33■□□□□ 0.68
SURF4-209ENST00000618229 ZFP91Q96JP5 570 aaPredicted RBP19.33■□□□□ 0.68
SURF4-209ENST00000618229 TEFQ10587 303 aa19.32■□□□□ 0.68
SURF4-209ENST00000618229 KIF18AQ8NI77 898 aa19.32■□□□□ 0.68
SURF4-209ENST00000618229 SDF4Q9BRK5 362 aa19.32■□□□□ 0.68
SURF4-209ENST00000618229 G3BP1Q13283 466 aaKnown RBP eCLIP19.32■□□□□ 0.682e-7■□□□□ 8.3
SURF4-209ENST00000618229 ERCC6LQ2NKX8 1250 aa19.32■□□□□ 0.68
SURF4-209ENST00000618229 FBXO38Q6PIJ6 1188 aa19.32■□□□□ 0.68
SURF4-209ENST00000618229 MPRIPQ6WCQ1 1025 aa19.32■□□□□ 0.68
SURF4-209ENST00000618229 ZNF589Q86UQ0 364 aaPredicted RBP19.32■□□□□ 0.68
SURF4-209ENST00000618229 LRRC8AQ8IWT6 810 aa19.32■□□□□ 0.68
SURF4-209ENST00000618229 CCAR1Q8IX12 1150 aaKnown RBP19.32■□□□□ 0.68
SURF4-209ENST00000618229 AOPEPQ8N6M6 819 aa19.32■□□□□ 0.68
SURF4-209ENST00000618229 RBM33Q96EV2 1170 aaKnown RBP19.32■□□□□ 0.68
SURF4-209ENST00000618229 CLSTN2Q9H4D0 955 aa19.32■□□□□ 0.68
SURF4-209ENST00000618229 DDX19AQ9NUU7 478 aaKnown RBP19.31■□□□□ 0.68
SURF4-209ENST00000618229 MAP3K2Q9Y2U5 619 aa19.31■□□□□ 0.68
SURF4-209ENST00000618229 PAXBP1Q9Y5B6 917 aa19.31■□□□□ 0.68
SURF4-209ENST00000618229 NPHP3Q7Z494 1330 aa19.31■□□□□ 0.68
SURF4-209ENST00000618229 PSMA5P28066 241 aa19.31■□□□□ 0.68
SURF4-209ENST00000618229 SLFNL1Q499Z3 407 aa19.31■□□□□ 0.68
SURF4-209ENST00000618229 KRT222Q8N1A0 295 aa19.31■□□□□ 0.68
SURF4-209ENST00000618229 SEC62Q99442 399 aaKnown RBP19.31■□□□□ 0.68
SURF4-209ENST00000618229 DDX41Q9UJV9 622 aaKnown RBP19.31■□□□□ 0.68
SURF4-209ENST00000618229 NECTIN1Q15223 517 aa19.3■□□□□ 0.68
SURF4-209ENST00000618229 HSP90AA4PQ58FG1 418 aa19.3■□□□□ 0.68
SURF4-209ENST00000618229 PRAMEF22A3QJZ6 481 aa19.3■□□□□ 0.68
SURF4-209ENST00000618229 PIP4K2AP48426 406 aaPredicted RBP19.3■□□□□ 0.68
SURF4-209ENST00000618229 LMOD2Q6P5Q4 547 aa19.3■□□□□ 0.68
SURF4-209ENST00000618229 SYT10Q6XYQ8 523 aa19.3■□□□□ 0.68
SURF4-209ENST00000618229 ANKRD26Q9UPS8 1709 aa19.3■□□□□ 0.68
SURF4-209ENST00000618229 RNF20Q5VTR2 975 aa19.3■□□□□ 0.68
SURF4-209ENST00000618229 EAF2Q96CJ1 260 aaPredicted RBP19.3■□□□□ 0.68
SURF4-209ENST00000618229 HECW2Q9P2P5 1572 aa19.3■□□□□ 0.68
SURF4-209ENST00000618229 CCDC73Q6ZRK6 1079 aa19.29■□□□□ 0.68
SURF4-209ENST00000618229 LRRN4CLQ8ND94 238 aa19.29■□□□□ 0.68
SURF4-209ENST00000618229 NCOA5Q9HCD5 579 aaKnown RBP19.29■□□□□ 0.68
SURF4-209ENST00000618229 SETD1BQ9UPS6 1966 aaKnown RBP19.29■□□□□ 0.68
SURF4-209ENST00000618229 KINO60870 393 aaKnown RBP19.29■□□□□ 0.68
SURF4-209ENST00000618229 Q6ZUG5 572 aa19.29■□□□□ 0.68
SURF4-209ENST00000618229 PLA2G4DQ86XP0 818 aa19.29■□□□□ 0.68
SURF4-209ENST00000618229 OTUD7BQ6GQQ9 843 aa19.29■□□□□ 0.68
SURF4-209ENST00000618229 STK11IPQ8N1F8 1099 aa19.29■□□□□ 0.68
SURF4-209ENST00000618229 CDC42BPGQ6DT37 1551 aa19.28■□□□□ 0.68
SURF4-209ENST00000618229 SLFN14P0C7P3 912 aa19.28■□□□□ 0.68
SURF4-209ENST00000618229 PROSER3Q2NL68 480 aa19.28■□□□□ 0.68
SURF4-209ENST00000618229 HSP90AB4PQ58FF6 505 aa19.28■□□□□ 0.68
SURF4-209ENST00000618229 EVI5LQ96CN4 794 aa19.28■□□□□ 0.68
SURF4-209ENST00000618229 RIMS1Q86UR5 1692 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms