RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 IL1RAPL2Q9NP60 686 aa12.88□□□□□ -0.35
POLR2A-209ENST00000617998 EIF4A2Q14240 407 aaKnown RBP12.88□□□□□ -0.35
POLR2A-209ENST00000617998 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
POLR2A-209ENST00000617998 DEFB132Q7Z7B7 95 aa12.88□□□□□ -0.35
POLR2A-209ENST00000617998 GBP4Q96PP9 640 aa12.88□□□□□ -0.35
POLR2A-209ENST00000617998 WDR63Q8IWG1 891 aa12.88□□□□□ -0.35
POLR2A-209ENST00000617998 SNRKQ9NRH2 765 aa12.88□□□□□ -0.35
POLR2A-209ENST00000617998 VPS37CA5D8V6 355 aaPredicted RBP12.87□□□□□ -0.35
POLR2A-209ENST00000617998 SLC27A3Q5K4L6 730 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 HELBQ8NG08 1087 aaPredicted RBP12.87□□□□□ -0.35
POLR2A-209ENST00000617998 ARHGEF10LQ9HCE6 1279 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 CHPF2Q9P2E5 772 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 EFCAB6Q5THR3 1501 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 PIK3C2GO75747 1445 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 FOXD4L6Q3SYB3 417 aaPredicted RBP12.87□□□□□ -0.35
POLR2A-209ENST00000617998 FOXD4L3Q6VB84 417 aaPredicted RBP12.87□□□□□ -0.35
POLR2A-209ENST00000617998 TTC6Q86TZ1 520 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 SMC3Q9UQE7 1217 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 EYA1Q99502 592 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 HIBADHP31937 336 aaKnown RBP12.87□□□□□ -0.35
POLR2A-209ENST00000617998 KCNQ4P56696 695 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 MAP3K19Q56UN5 1328 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
POLR2A-209ENST00000617998 IPO7O95373 1038 aaKnown RBP12.86□□□□□ -0.35
POLR2A-209ENST00000617998 IREB2P48200 963 aaKnown RBP12.86□□□□□ -0.35
POLR2A-209ENST00000617998 CDKL5O76039 1030 aa12.86□□□□□ -0.35
POLR2A-209ENST00000617998 ECE1P42892 770 aa12.86□□□□□ -0.35
POLR2A-209ENST00000617998 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
POLR2A-209ENST00000617998 CIAPIN1Q6FI81 312 aa12.86□□□□□ -0.35
POLR2A-209ENST00000617998 PPEF1O14829 653 aaPredicted RBP12.86□□□□□ -0.35
POLR2A-209ENST00000617998 KDM4FA0A1W2PPD8 638 aa12.86□□□□□ -0.35
POLR2A-209ENST00000617998 FLIIQ13045 1269 aa12.86□□□□□ -0.35
POLR2A-209ENST00000617998 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
POLR2A-209ENST00000617998 TNPO1Q92973 898 aaKnown RBP12.86□□□□□ -0.35
POLR2A-209ENST00000617998 ABCA5Q8WWZ7 1642 aa12.86□□□□□ -0.35
POLR2A-209ENST00000617998 M0QZ92 97 aa12.85□□□□□ -0.35
POLR2A-209ENST00000617998 BAG4O95429 457 aaKnown RBP12.85□□□□□ -0.35
POLR2A-209ENST00000617998 KIF1BPQ96EK5 621 aa12.85□□□□□ -0.35
POLR2A-209ENST00000617998 ZYXQ15942 572 aaKnown RBP12.85□□□□□ -0.35
POLR2A-209ENST00000617998 BOLA2Q9H3K6 86 aa12.85□□□□□ -0.35
POLR2A-209ENST00000617998 PIK3R4Q99570 1358 aa12.85□□□□□ -0.35
POLR2A-209ENST00000617998 CTTNBP2Q8WZ74 1663 aa12.85□□□□□ -0.35
POLR2A-209ENST00000617998 PANK1Q8TE04 598 aa12.85□□□□□ -0.35
POLR2A-209ENST00000617998 ZBTB33Q86T24 672 aa12.84□□□□□ -0.35
POLR2A-209ENST00000617998 TEX11Q8IYF3 940 aa12.84□□□□□ -0.35
POLR2A-209ENST00000617998 F6X3S4 739 aa12.84□□□□□ -0.35
POLR2A-209ENST00000617998 C21orf2O43822 256 aa12.84□□□□□ -0.35
POLR2A-209ENST00000617998 OSBPP22059 807 aa12.84□□□□□ -0.35
POLR2A-209ENST00000617998 CCNA1P78396 465 aa12.84□□□□□ -0.35
POLR2A-209ENST00000617998 CCDC8Q9H0W5 538 aaPredicted RBP12.84□□□□□ -0.35
POLR2A-209ENST00000617998 CATIPQ7Z7H3 387 aa12.84□□□□□ -0.35
POLR2A-209ENST00000617998 ABCA8O94911 1581 aa12.84□□□□□ -0.35
POLR2A-209ENST00000617998 ZNF790Q6PG37 636 aa12.84□□□□□ -0.35
POLR2A-209ENST00000617998 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
POLR2A-209ENST00000617998 CCDC178Q5BJE1 867 aa12.83□□□□□ -0.35
POLR2A-209ENST00000617998 BICD2Q8TD16 824 aa12.83□□□□□ -0.35
POLR2A-209ENST00000617998 MAPKBP1O60336 1514 aa12.83□□□□□ -0.35
POLR2A-209ENST00000617998 PTPRMP28827 1452 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 TCP10Q12799 353 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 DISP1Q96F81 1524 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 ZBED4O75132 1171 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.36
POLR2A-209ENST00000617998 KIF5BP33176 963 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 LBHD1Q9BQE6 289 aaPredicted RBP12.83□□□□□ -0.36
POLR2A-209ENST00000617998 SLC52A2Q9HAB3 445 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 STK25O00506 426 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 A1BGP04217 495 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 GTF2IP78347 998 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 VPS72Q15906 364 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 DENND2AQ9ULE3 1009 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 MAP3K5Q99683 1374 aa12.83□□□□□ -0.36
POLR2A-209ENST00000617998 CCDC12Q8WUD4 166 aaPredicted RBP12.83□□□□□ -0.36
POLR2A-209ENST00000617998 PDE8AO60658 829 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
POLR2A-209ENST00000617998 EZH2Q15910 746 aaKnown RBP12.82□□□□□ -0.36
POLR2A-209ENST00000617998 CCDC150Q8NCX0 1101 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 WASF1Q92558 559 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 SAMD9Q5K651 1589 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 TNNT3P45378 269 aaPredicted RBP12.82□□□□□ -0.36
POLR2A-209ENST00000617998 CCDC129Q6ZRS4 1044 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 DPP9Q86TI2 863 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 FAM89AQ96GI7 184 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 CCDC97Q96F63 343 aaPredicted RBP12.82□□□□□ -0.36
POLR2A-209ENST00000617998 WDR17Q8IZU2 1322 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 BECN2A8MW95 431 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 ATP2B4P23634 1241 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 MTHFSDQ2M296 383 aaKnown RBP12.82□□□□□ -0.36
POLR2A-209ENST00000617998 TBC1D22AQ8WUA7 517 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 TCP10L2B9ZVM9 353 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 ZNF213O14771 459 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 RAD17O75943 681 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
POLR2A-209ENST00000617998 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
POLR2A-209ENST00000617998 DHX37Q8IY37 1157 aaKnown RBP12.81□□□□□ -0.36
POLR2A-209ENST00000617998 PODXL2Q9NZ53 605 aa12.81□□□□□ -0.36
POLR2A-209ENST00000617998 CFAP65Q6ZU64 1925 aaKnown RBP12.81□□□□□ -0.36
POLR2A-209ENST00000617998 CCDC196A0A1B0GTZ2 297 aa12.81□□□□□ -0.36
POLR2A-209ENST00000617998 RAB11FIP3O75154 756 aa12.81□□□□□ -0.36
POLR2A-209ENST00000617998 WDR66Q8TBY9 1149 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms