RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 NEFHP12036 1026 aa11.8□□□□□ -0.52
CUL4A-212ENST00000617546 DNAJC25Q9H1X3 360 aa11.8□□□□□ -0.52
CUL4A-212ENST00000617546 ATP8B1O43520 1251 aa11.8□□□□□ -0.52
CUL4A-212ENST00000617546 KRT83P78385 493 aa11.8□□□□□ -0.52
CUL4A-212ENST00000617546 SOGA3Q5TF21 947 aa11.8□□□□□ -0.52
CUL4A-212ENST00000617546 SYKP43405 635 aa11.8□□□□□ -0.52
CUL4A-212ENST00000617546 ATP8B2P98198 1209 aa11.8□□□□□ -0.52
CUL4A-212ENST00000617546 SSRP1Q08945 709 aaKnown RBP11.8□□□□□ -0.52
CUL4A-212ENST00000617546 DUOX2Q9NRD8 1548 aa11.79□□□□□ -0.52
CUL4A-212ENST00000617546 CTTNBP2Q8WZ74 1663 aa11.79□□□□□ -0.52
CUL4A-212ENST00000617546 FLIIQ13045 1269 aa11.79□□□□□ -0.52
CUL4A-212ENST00000617546 MICALL1Q8N3F8 863 aa11.79□□□□□ -0.52
CUL4A-212ENST00000617546 STMN4Q9H169 189 aaPredicted RBP11.79□□□□□ -0.52
CUL4A-212ENST00000617546 CCDC61Q9Y6R9 512 aa11.79□□□□□ -0.52
CUL4A-212ENST00000617546 GPATCH8Q9UKJ3 1502 aaKnown RBP11.79□□□□□ -0.52
CUL4A-212ENST00000617546 DNM1Q05193 864 aaKnown RBP11.79□□□□□ -0.52
CUL4A-212ENST00000617546 C14orf93Q9H972 538 aaKnown RBP11.79□□□□□ -0.52
CUL4A-212ENST00000617546 SSH2Q76I76 1423 aa11.79□□□□□ -0.52
CUL4A-212ENST00000617546 CETN2P41208 172 aa11.79□□□□□ -0.52
CUL4A-212ENST00000617546 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
CUL4A-212ENST00000617546 KRBA2Q6ZNG9 492 aa11.79□□□□□ -0.52
CUL4A-212ENST00000617546 AOPEPQ8N6M6 819 aa11.79□□□□□ -0.52
CUL4A-212ENST00000617546 MPHOSPH8Q99549 860 aa11.79□□□□□ -0.52
CUL4A-212ENST00000617546 ZNF75DP51815 510 aa11.78□□□□□ -0.52
CUL4A-212ENST00000617546 OTUD6BQ8N6M0 293 aa11.78□□□□□ -0.52
CUL4A-212ENST00000617546 SIL1Q9H173 461 aa11.78□□□□□ -0.52
CUL4A-212ENST00000617546 BTBD11A6QL63 1104 aa11.78□□□□□ -0.52
CUL4A-212ENST00000617546 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
CUL4A-212ENST00000617546 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
CUL4A-212ENST00000617546 KDM5DQ9BY66 1539 aa11.78□□□□□ -0.52
CUL4A-212ENST00000617546 CACNA2D4Q7Z3S7 1137 aa11.78□□□□□ -0.52
CUL4A-212ENST00000617546 CLSTN2Q9H4D0 955 aa11.78□□□□□ -0.52
CUL4A-212ENST00000617546 RNF41Q9H4P4 317 aaPredicted RBP11.78□□□□□ -0.52
CUL4A-212ENST00000617546 RTL1A6NKG5 1358 aa11.78□□□□□ -0.52
CUL4A-212ENST00000617546 ZNF530Q6P9A1 599 aaPredicted RBP11.77□□□□□ -0.52
CUL4A-212ENST00000617546 BRAPQ7Z569 592 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 ANKS4BQ8N8V4 417 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 RHPN1Q8TCX5 695 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 LRRC27Q9C0I9 530 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 VPS18Q9P253 973 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 PPP1R12BO60237 982 aaPredicted RBP11.77□□□□□ -0.52
CUL4A-212ENST00000617546 AMPD3Q01432 767 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 GBP6Q6ZN66 633 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 FAM76AQ8TAV0 307 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 TESK2Q96S53 571 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 CNNM1Q9NRU3 951 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 RBM28Q9NW13 759 aaKnown RBP11.77□□□□□ -0.52
CUL4A-212ENST00000617546 SPG7Q9UQ90 795 aa11.77□□□□□ -0.52
CUL4A-212ENST00000617546 CCDC121Q6ZUS5 278 aa11.77□□□□□ -0.53
CUL4A-212ENST00000617546 A0A1B0GUA9 196 aa11.77□□□□□ -0.53
CUL4A-212ENST00000617546 U2AF2P26368 475 aaKnown RBP eCLIP11.77□□□□□ -0.539e-8■■■■□ 22.4
CUL4A-212ENST00000617546 MCM6Q14566 821 aa11.77□□□□□ -0.53
CUL4A-212ENST00000617546 SYT10Q6XYQ8 523 aa11.77□□□□□ -0.53
CUL4A-212ENST00000617546 RBM42Q9BTD8 480 aaKnown RBP11.77□□□□□ -0.53
CUL4A-212ENST00000617546 DNMT1P26358 1616 aaKnown RBP11.77□□□□□ -0.53
CUL4A-212ENST00000617546 ABCC2Q92887 1545 aa11.77□□□□□ -0.53
CUL4A-212ENST00000617546 GCC2Q8IWJ2 1684 aa11.77□□□□□ -0.53
CUL4A-212ENST00000617546 RLBP1P12271 317 aa11.77□□□□□ -0.53
CUL4A-212ENST00000617546 TATP17735 454 aaPredicted RBP11.77□□□□□ -0.53
CUL4A-212ENST00000617546 GOLGA8BA8MQT2 603 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 ZNF213O14771 459 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 AMOTQ4VCS5 1084 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 ZGPATQ8N5A5 531 aaKnown RBP11.76□□□□□ -0.53
CUL4A-212ENST00000617546 EVCP57679 992 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 TRIM14Q14142 442 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 C10orf67Q8IYJ2 551 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 IPO4Q8TEX9 1081 aaKnown RBP11.76□□□□□ -0.53
CUL4A-212ENST00000617546 NUP133Q8WUM0 1156 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 RAB34Q9BZG1 259 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.76□□□□□ -0.537e-6■□□□□ 10.1
CUL4A-212ENST00000617546 DBF4Q9UBU7 674 aaPredicted RBP11.76□□□□□ -0.53
CUL4A-212ENST00000617546 KRT86O43790 486 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 TACC1O75410 805 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 ZFYVE27Q5T4F4 411 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 SPATS2Q86XZ4 545 aaKnown RBP11.76□□□□□ -0.53
CUL4A-212ENST00000617546 RSRC1Q96IZ7 334 aaKnown RBP11.76□□□□□ -0.53
CUL4A-212ENST00000617546 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
CUL4A-212ENST00000617546 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
CUL4A-212ENST00000617546 BRD1O95696 1058 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 DNAJC21Q5F1R6 531 aaKnown RBP11.75□□□□□ -0.53
CUL4A-212ENST00000617546 ABTB2Q8N961 1025 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 AFAP1L1Q8TED9 768 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 PPP2R3AQ06190 1150 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 MSL1Q68DK7 614 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 CEP85Q6P2H3 762 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 LLPHQ9BRT6 129 aaKnown RBP11.75□□□□□ -0.53
CUL4A-212ENST00000617546 TSGA10Q9BZW7 698 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 CHMLP26374 656 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 ARHGAP25P42331 645 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 MAATS1Q7Z4T9 603 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 CNGA4Q8IV77 575 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 SLC12A7Q9Y666 1083 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 TDO2P48775 406 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 AK2P54819 239 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 FKBP4Q02790 459 aaKnown RBP eCLIP11.75□□□□□ -0.53
CUL4A-212ENST00000617546 FAM160A1Q05DH4 1040 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 BRD3Q15059 726 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 CCDC129Q6ZRS4 1044 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 SPATA31E1Q6ZUB1 1445 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms