RNA–Protein interactions for RNA: ENST00000617408.1

PCDHA11-203, Transcript of protocadherin alpha 11, humanhuman

TSL 3

Gene PCDHA11, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-203ENST00000617408 CHMP4AQ9BY43 222 aa27.07■■□□□ 1.92
PCDHA11-203ENST00000617408 PHAXQ9H814 394 aaKnown RBP27.07■■□□□ 1.92
PCDHA11-203ENST00000617408 GPBP1L1Q9HC44 474 aaPredicted RBP27.07■■□□□ 1.92
PCDHA11-203ENST00000617408 GOLGA2Q08379 1002 aa27.06■■□□□ 1.92
PCDHA11-203ENST00000617408 TWISTNBQ3B726 338 aaPredicted RBP27.06■■□□□ 1.92
PCDHA11-203ENST00000617408 NLRP10Q86W26 655 aa27.06■■□□□ 1.92
PCDHA11-203ENST00000617408 TIAM2Q8IVF5 1701 aa27.04■■□□□ 1.92
PCDHA11-203ENST00000617408 FER1L6Q2WGJ9 1857 aa27.04■■□□□ 1.92
PCDHA11-203ENST00000617408 NFKBIEO00221 500 aa27.04■■□□□ 1.92
PCDHA11-203ENST00000617408 RPGRQ92834 1020 aaKnown RBP27.04■■□□□ 1.92
PCDHA11-203ENST00000617408 ZNF428Q96B54 188 aa27.04■■□□□ 1.92
PCDHA11-203ENST00000617408 STK31Q9BXU1 1019 aa27.04■■□□□ 1.92
PCDHA11-203ENST00000617408 CRY2Q49AN0 593 aa27.03■■□□□ 1.92
PCDHA11-203ENST00000617408 RNF123Q5XPI4 1314 aa27.03■■□□□ 1.92
PCDHA11-203ENST00000617408 RIC3Q7Z5B4 369 aa27.03■■□□□ 1.92
PCDHA11-203ENST00000617408 TCERG1O14776 1098 aaKnown RBP27.02■■□□□ 1.92
PCDHA11-203ENST00000617408 SOGA3Q5TF21 947 aa27.02■■□□□ 1.92
PCDHA11-203ENST00000617408 TRMT112Q9UI30 125 aaKnown RBP27.02■■□□□ 1.92
PCDHA11-203ENST00000617408 CCDC88AQ3V6T2 1871 aa27.02■■□□□ 1.92
PCDHA11-203ENST00000617408 LAMB2P55268 1798 aa27.02■■□□□ 1.92
PCDHA11-203ENST00000617408 ATP5J2-PTCD1G3V325 749 aa27.01■■□□□ 1.91
PCDHA11-203ENST00000617408 SH3TC1Q8TE82 1336 aa27■■□□□ 1.91
PCDHA11-203ENST00000617408 LMNB1P20700 586 aa27■■□□□ 1.91
PCDHA11-203ENST00000617408 ALDH1B1P30837 517 aa27■■□□□ 1.91
PCDHA11-203ENST00000617408 C3orf67Q6ZVT6 689 aa27■■□□□ 1.91
PCDHA11-203ENST00000617408 CCER2I3L3R5 266 aa26.99■■□□□ 1.91
PCDHA11-203ENST00000617408 DDX58O95786 925 aaKnown RBP26.99■■□□□ 1.91
PCDHA11-203ENST00000617408 NLRP3Q96P20 1036 aa26.99■■□□□ 1.91
PCDHA11-203ENST00000617408 TAOK3Q9H2K8 898 aa26.99■■□□□ 1.91
PCDHA11-203ENST00000617408 MYH16Q9H6N6 1097 aa26.99■■□□□ 1.91
PCDHA11-203ENST00000617408 SPINK5Q9NQ38 1064 aaPredicted RBP26.99■■□□□ 1.91
PCDHA11-203ENST00000617408 PRELPP51888 382 aa26.98■■□□□ 1.91
PCDHA11-203ENST00000617408 CCDC93Q567U6 631 aa26.98■■□□□ 1.91
PCDHA11-203ENST00000617408 RBM17Q96I25 401 aaKnown RBP26.98■■□□□ 1.91
PCDHA11-203ENST00000617408 ISCA1Q9BUE6 129 aa26.98■■□□□ 1.91
PCDHA11-203ENST00000617408 DDX60Q8IY21 1712 aaKnown RBP26.97■■□□□ 1.91
PCDHA11-203ENST00000617408 HCLS1P14317 486 aaPredicted RBP26.97■■□□□ 1.91
PCDHA11-203ENST00000617408 EXOSC9Q06265 439 aaKnown RBP26.97■■□□□ 1.91
PCDHA11-203ENST00000617408 SYNE4Q8N205 404 aa26.97■■□□□ 1.91
PCDHA11-203ENST00000617408 MYD88Q99836 296 aa26.97■■□□□ 1.91
PCDHA11-203ENST00000617408 SLC10A5Q5PT55 438 aa26.96■■□□□ 1.91
PCDHA11-203ENST00000617408 OLFM4Q6UX06 510 aa26.96■■□□□ 1.91
PCDHA11-203ENST00000617408 C7orf43Q8WVR3 580 aa26.96■■□□□ 1.91
PCDHA11-203ENST00000617408 LTBP3Q9NS15 1303 aa26.95■■□□□ 1.91
PCDHA11-203ENST00000617408 SLC4A2P04920 1241 aa26.94■■□□□ 1.9
PCDHA11-203ENST00000617408 HOXA10P31260 410 aaPredicted RBP26.94■■□□□ 1.9
PCDHA11-203ENST00000617408 DICER1Q9UPY3 1922 aaKnown RBP26.94■■□□□ 1.9
PCDHA11-203ENST00000617408 ZNF521Q96K83 1311 aa26.93■■□□□ 1.9
PCDHA11-203ENST00000617408 ZC3H4Q9UPT8 1303 aaKnown RBP26.93■■□□□ 1.9
PCDHA11-203ENST00000617408 RTL5Q5HYW3 569 aaPredicted RBP26.93■■□□□ 1.9
PCDHA11-203ENST00000617408 FAM89AQ96GI7 184 aa26.93■■□□□ 1.9
PCDHA11-203ENST00000617408 MAP3K2Q9Y2U5 619 aa26.93■■□□□ 1.9
PCDHA11-203ENST00000617408 PPEF1O14829 653 aaPredicted RBP26.92■■□□□ 1.9
PCDHA11-203ENST00000617408 CRAMP1Q96RY5 1269 aa26.92■■□□□ 1.9
PCDHA11-203ENST00000617408 VAMP4O75379 141 aa26.91■■□□□ 1.9
PCDHA11-203ENST00000617408 DIEXFQ68CQ4 756 aaKnown RBP26.91■■□□□ 1.9
PCDHA11-203ENST00000617408 G2E3Q7L622 706 aa26.91■■□□□ 1.9
PCDHA11-203ENST00000617408 METTL22Q9BUU2 404 aaPredicted RBP26.91■■□□□ 1.9
PCDHA11-203ENST00000617408 ABCC4O15439 1325 aa26.9■■□□□ 1.9
PCDHA11-203ENST00000617408 KDM2BQ8NHM5 1336 aa26.9■■□□□ 1.9
PCDHA11-203ENST00000617408 PI4KAP2A4QPH2 592 aa26.9■■□□□ 1.9
PCDHA11-203ENST00000617408 C1QTNF8P60827 252 aa26.9■■□□□ 1.9
PCDHA11-203ENST00000617408 FKBP4Q02790 459 aaKnown RBP eCLIP26.9■■□□□ 1.9
PCDHA11-203ENST00000617408 TRIM28Q13263 835 aaKnown RBP26.9■■□□□ 1.9
PCDHA11-203ENST00000617408 KSR2Q6VAB6 950 aa26.9■■□□□ 1.9
PCDHA11-203ENST00000617408 RTKN2Q8IZC4 609 aa26.9■■□□□ 1.9
PCDHA11-203ENST00000617408 PI4KAP1Q8N8J0 262 aa26.9■■□□□ 1.9
PCDHA11-203ENST00000617408 NMRK2Q9NPI5 230 aa26.89■■□□□ 1.9
PCDHA11-203ENST00000617408 CACNA1FO60840 1977 aa26.89■■□□□ 1.89
PCDHA11-203ENST00000617408 FLIIQ13045 1269 aa26.88■■□□□ 1.89
PCDHA11-203ENST00000617408 CWC25Q9NXE8 425 aaPredicted RBP26.88■■□□□ 1.89
PCDHA11-203ENST00000617408 DDX46Q7L014 1031 aaKnown RBP26.87■■□□□ 1.89
PCDHA11-203ENST00000617408 SLC51AQ86UW1 340 aa26.87■■□□□ 1.89
PCDHA11-203ENST00000617408 CCDC191Q8NCU4 936 aa26.87■■□□□ 1.89
PCDHA11-203ENST00000617408 ZNF277Q9NRM2 450 aaPredicted RBP26.87■■□□□ 1.89
PCDHA11-203ENST00000617408 IRS4O14654 1257 aaPredicted RBP26.86■■□□□ 1.89
PCDHA11-203ENST00000617408 KIF3CO14782 793 aa26.86■■□□□ 1.89
PCDHA11-203ENST00000617408 NEXNQ0ZGT2 675 aa26.86■■□□□ 1.89
PCDHA11-203ENST00000617408 FKBP5Q13451 457 aaPredicted RBP26.86■■□□□ 1.89
PCDHA11-203ENST00000617408 ZBTB38Q8NAP3 1195 aaPredicted RBP26.86■■□□□ 1.89
PCDHA11-203ENST00000617408 SNED1Q8TER0 1413 aa26.86■■□□□ 1.89
PCDHA11-203ENST00000617408 CC2D2BQ6DHV5 1058 aa26.85■■□□□ 1.89
PCDHA11-203ENST00000617408 TMX4Q9H1E5 349 aaPredicted RBP26.85■■□□□ 1.89
PCDHA11-203ENST00000617408 TAF1P21675 1872 aa26.85■■□□□ 1.89
PCDHA11-203ENST00000617408 GLTPD2A6NH11 291 aa26.83■■□□□ 1.89
PCDHA11-203ENST00000617408 E9PSI1 815 aa26.83■■□□□ 1.89
PCDHA11-203ENST00000617408 PCCAP05165 728 aaPredicted RBP26.83■■□□□ 1.89
PCDHA11-203ENST00000617408 GRAPQ13588 217 aa26.83■■□□□ 1.89
PCDHA11-203ENST00000617408 GRAPLQ8TC17 118 aaPredicted RBP26.83■■□□□ 1.89
PCDHA11-203ENST00000617408 IGKV5-2P06315 115 aa26.82■■□□□ 1.88
PCDHA11-203ENST00000617408 CWF19L2Q2TBE0 894 aaKnown RBP26.82■■□□□ 1.88
PCDHA11-203ENST00000617408 MIER1Q8N108 512 aa26.82■■□□□ 1.88
PCDHA11-203ENST00000617408 JARID2Q92833 1246 aaPredicted RBP26.82■■□□□ 1.88
PCDHA11-203ENST00000617408 PSMD1Q99460 953 aa26.82■■□□□ 1.88
PCDHA11-203ENST00000617408 ATP6V0A2Q9Y487 856 aa26.82■■□□□ 1.88
PCDHA11-203ENST00000617408 HSP90B1P14625 803 aaKnown RBP26.81■■□□□ 1.88
PCDHA11-203ENST00000617408 IARSP41252 1262 aaKnown RBP26.81■■□□□ 1.88
PCDHA11-203ENST00000617408 DPY19L2Q6NUT2 758 aa26.81■■□□□ 1.88
PCDHA11-203ENST00000617408 RRAGCQ9HB90 399 aa26.81■■□□□ 1.88
PCDHA11-203ENST00000617408 SF3B3Q15393 1217 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms