RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 MS4A1P11836 297 aa19.76■□□□□ 0.75
PCDHGC3-204ENST00000617222 RLBP1P12271 317 aa19.76■□□□□ 0.75
PCDHGC3-204ENST00000617222 TPTE2Q6XPS3 522 aa19.76■□□□□ 0.75
PCDHGC3-204ENST00000617222 TMEM57Q8N5G2 664 aa19.76■□□□□ 0.75
PCDHGC3-204ENST00000617222 JARID2Q92833 1246 aaPredicted RBP19.76■□□□□ 0.75
PCDHGC3-204ENST00000617222 TRMT112Q9UI30 125 aaKnown RBP19.76■□□□□ 0.75
PCDHGC3-204ENST00000617222 NUP98P52948 1817 aa19.76■□□□□ 0.75
PCDHGC3-204ENST00000617222 NPHP1O15259 732 aa19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 NTSR2O95665 410 aa19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 GTF2E1P29083 439 aaPredicted RBP19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 PTGER2P43116 358 aa19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 GCKRQ14397 625 aa19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 C20orf194Q5TEA3 1177 aa19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 INTS3Q68E01 1043 aaKnown RBP19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 CCDC24Q8N4L8 307 aa19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 SGIP1Q9BQI5 828 aa19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 NYXQ9GZU5 481 aa19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 ARFGEF2Q9Y6D5 1785 aa19.75■□□□□ 0.75
PCDHGC3-204ENST00000617222 RTL5Q5HYW3 569 aaPredicted RBP19.74■□□□□ 0.75
PCDHGC3-204ENST00000617222 NUTM1Q86Y26 1132 aa19.74■□□□□ 0.75
PCDHGC3-204ENST00000617222 PDE3AQ14432 1141 aa19.73■□□□□ 0.75
PCDHGC3-204ENST00000617222 PRR5LQ6MZQ0 368 aa19.73■□□□□ 0.75
PCDHGC3-204ENST00000617222 SYNE4Q8N205 404 aa19.73■□□□□ 0.75
PCDHGC3-204ENST00000617222 CNBD1Q8NA66 436 aa19.73■□□□□ 0.75
PCDHGC3-204ENST00000617222 FAM89AQ96GI7 184 aa19.73■□□□□ 0.75
PCDHGC3-204ENST00000617222 C9orf78Q9NZ63 289 aaPredicted RBP19.73■□□□□ 0.75
PCDHGC3-204ENST00000617222 RNF123Q5XPI4 1314 aa19.73■□□□□ 0.75
PCDHGC3-204ENST00000617222 H7C1W4 665 aa19.72■□□□□ 0.75
PCDHGC3-204ENST00000617222 PCCAP05165 728 aaPredicted RBP19.72■□□□□ 0.75
PCDHGC3-204ENST00000617222 ERFEQ4G0M1 354 aa19.72■□□□□ 0.75
PCDHGC3-204ENST00000617222 ITPRIPQ8IWB1 547 aa19.72■□□□□ 0.75
PCDHGC3-204ENST00000617222 ZBTB38Q8NAP3 1195 aaPredicted RBP19.72■□□□□ 0.75
PCDHGC3-204ENST00000617222 PXDNLA1KZ92 1463 aa19.71■□□□□ 0.75
PCDHGC3-204ENST00000617222 SH3TC1Q8TE82 1336 aa19.71■□□□□ 0.75
PCDHGC3-204ENST00000617222 IBTKQ9P2D0 1353 aaPredicted RBP19.7■□□□□ 0.74
PCDHGC3-204ENST00000617222 GRM8O00222 908 aa19.7■□□□□ 0.74
PCDHGC3-204ENST00000617222 ST5P78524 1137 aa19.7■□□□□ 0.74
PCDHGC3-204ENST00000617222 UBE3BQ7Z3V4 1068 aa19.7■□□□□ 0.74
PCDHGC3-204ENST00000617222 USP44Q9H0E7 712 aa19.7■□□□□ 0.74
PCDHGC3-204ENST00000617222 COG6Q9Y2V7 657 aa19.7■□□□□ 0.74
PCDHGC3-204ENST00000617222 IRS4O14654 1257 aaPredicted RBP19.69■□□□□ 0.74
PCDHGC3-204ENST00000617222 HCLS1P14317 486 aaPredicted RBP19.69■□□□□ 0.74
PCDHGC3-204ENST00000617222 NBPF7P0C2Y1 421 aaPredicted RBP19.68■□□□□ 0.74
PCDHGC3-204ENST00000617222 CASP7P55210 303 aa19.68■□□□□ 0.74
PCDHGC3-204ENST00000617222 SLC10A5Q5PT55 438 aa19.68■□□□□ 0.74
PCDHGC3-204ENST00000617222 MVPQ14764 893 aaKnown RBP19.67■□□□□ 0.74
PCDHGC3-204ENST00000617222 KLHL34Q8N239 644 aa19.67■□□□□ 0.74
PCDHGC3-204ENST00000617222 MEIS3Q99687 375 aa19.67■□□□□ 0.74
PCDHGC3-204ENST00000617222 PPP1R1BQ9UD71 204 aaPredicted RBP19.67■□□□□ 0.74
PCDHGC3-204ENST00000617222 ABCC12Q96J65 1359 aa19.67■□□□□ 0.74
PCDHGC3-204ENST00000617222 ANKRD36CQ5JPF3 1778 aa19.67■□□□□ 0.74
PCDHGC3-204ENST00000617222 BRIP1Q9BX63 1249 aa19.66■□□□□ 0.74
PCDHGC3-204ENST00000617222 UTYO14607 1347 aa19.66■□□□□ 0.74
PCDHGC3-204ENST00000617222 CDHR2Q9BYE9 1310 aa19.66■□□□□ 0.74
PCDHGC3-204ENST00000617222 ZBTB7BO15156 539 aaPredicted RBP19.65■□□□□ 0.74
PCDHGC3-204ENST00000617222 DDX19BQ9UMR2 479 aa19.65■□□□□ 0.74
PCDHGC3-204ENST00000617222 COL24A1Q17RW2 1714 aa19.65■□□□□ 0.74
PCDHGC3-204ENST00000617222 GNAI3P08754 354 aa19.64■□□□□ 0.73
PCDHGC3-204ENST00000617222 UBTFL1P0CB47 393 aaPredicted RBP19.64■□□□□ 0.73
PCDHGC3-204ENST00000617222 HSP90B1P14625 803 aaKnown RBP19.64■□□□□ 0.73
PCDHGC3-204ENST00000617222 SUCLG2Q96I99 432 aa19.64■□□□□ 0.73
PCDHGC3-204ENST00000617222 NLRP3Q96P20 1036 aa19.64■□□□□ 0.73
PCDHGC3-204ENST00000617222 PDE8AO60658 829 aa19.63■□□□□ 0.73
PCDHGC3-204ENST00000617222 PDE6BP35913 854 aa19.63■□□□□ 0.73
PCDHGC3-204ENST00000617222 C3orf67Q6ZVT6 689 aa19.63■□□□□ 0.73
PCDHGC3-204ENST00000617222 CRBNQ96SW2 442 aa19.63■□□□□ 0.73
PCDHGC3-204ENST00000617222 IRX6P78412 446 aaPredicted RBP19.62■□□□□ 0.73
PCDHGC3-204ENST00000617222 EPHA10Q5JZY3 1008 aa19.62■□□□□ 0.73
PCDHGC3-204ENST00000617222 PLA2G12BQ9BX93 195 aa19.62■□□□□ 0.73
PCDHGC3-204ENST00000617222 CD2APQ9Y5K6 639 aa19.62■□□□□ 0.73
PCDHGC3-204ENST00000617222 AFDNP55196 1824 aaKnown RBP19.62■□□□□ 0.73
PCDHGC3-204ENST00000617222 C10orf71Q711Q0 1435 aa19.61■□□□□ 0.73
PCDHGC3-204ENST00000617222 KAZALD1Q96I82 304 aa19.61■□□□□ 0.73
PCDHGC3-204ENST00000617222 HDAC5Q9UQL6 1122 aa19.61■□□□□ 0.73
PCDHGC3-204ENST00000617222 LRRFIP2Q9Y608 721 aaKnown RBP19.61■□□□□ 0.73
PCDHGC3-204ENST00000617222 NRXN2Q9P2S2 1712 aa19.61■□□□□ 0.73
PCDHGC3-204ENST00000617222 KLRG2A4D1S0 409 aaPredicted RBP19.6■□□□□ 0.73
PCDHGC3-204ENST00000617222 GNAI2P04899 355 aa19.6■□□□□ 0.73
PCDHGC3-204ENST00000617222 CHRNA5P30532 468 aa19.6■□□□□ 0.73
PCDHGC3-204ENST00000617222 CTSWP56202 376 aa19.6■□□□□ 0.73
PCDHGC3-204ENST00000617222 FOXO4P98177 505 aa19.6■□□□□ 0.73
PCDHGC3-204ENST00000617222 C2CD5Q86YS7 1000 aa19.6■□□□□ 0.73
PCDHGC3-204ENST00000617222 CCDC85AQ96PX6 553 aaPredicted RBP19.6■□□□□ 0.73
PCDHGC3-204ENST00000617222 FHDC1Q9C0D6 1143 aaPredicted RBP19.6■□□□□ 0.73
PCDHGC3-204ENST00000617222 CHMP4BQ9H444 224 aaKnown RBP19.6■□□□□ 0.73
PCDHGC3-204ENST00000617222 H0YIN7 160 aa19.59■□□□□ 0.73
PCDHGC3-204ENST00000617222 TGFB2P61812 414 aa19.59■□□□□ 0.73
PCDHGC3-204ENST00000617222 SF3B3Q15393 1217 aaKnown RBP19.59■□□□□ 0.73
PCDHGC3-204ENST00000617222 TTLL11Q8NHH1 800 aa19.59■□□□□ 0.73
PCDHGC3-204ENST00000617222 BICC1Q9H694 974 aaKnown RBP19.59■□□□□ 0.73
PCDHGC3-204ENST00000617222 C1orf115Q9H7X2 142 aa19.59■□□□□ 0.73
PCDHGC3-204ENST00000617222 A0A0G2JLW4 131 aa19.58■□□□□ 0.72
PCDHGC3-204ENST00000617222 DPEP1P16444 411 aa19.58■□□□□ 0.72
PCDHGC3-204ENST00000617222 LMBR1LQ6UX01 489 aa19.58■□□□□ 0.72
PCDHGC3-204ENST00000617222 ZBTB40Q9NUA8 1239 aa19.58■□□□□ 0.72
PCDHGC3-204ENST00000617222 PDZRN3Q9UPQ7 1066 aa19.58■□□□□ 0.72
PCDHGC3-204ENST00000617222 RIC1Q4ADV7 1423 aa19.58■□□□□ 0.72
PCDHGC3-204ENST00000617222 CSF1RP07333 972 aa19.57■□□□□ 0.72
PCDHGC3-204ENST00000617222 SRGNP10124 158 aa19.57■□□□□ 0.72
PCDHGC3-204ENST00000617222 CRY2Q49AN0 593 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms