RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	TTC31	Q49AM3	519 aa	Predicted RBP	13.65	□□□□□ -0.22
TP53-222	ENST00000617185	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.65	□□□□□ -0.22
TP53-222	ENST00000617185	G2E3	Q7L622	706 aa		13.65	□□□□□ -0.22
TP53-222	ENST00000617185	DRC7	Q8IY82	874 aa		13.65	□□□□□ -0.22
TP53-222	ENST00000617185	DDX17	Q92841	729 aa	Known RBP	13.65	□□□□□ -0.22
TP53-222	ENST00000617185	RRP15	Q9Y3B9	282 aa	Known RBP	13.65	□□□□□ -0.22
TP53-222	ENST00000617185	SLC4A2	P04920	1241 aa		13.65	□□□□□ -0.22
TP53-222	ENST00000617185	PTPN14	Q15678	1187 aa		13.65	□□□□□ -0.22
TP53-222	ENST00000617185	SIRT2	Q8IXJ6	389 aa		13.65	□□□□□ -0.22
TP53-222	ENST00000617185	CEP120	Q8N960	986 aa		13.65	□□□□□ -0.22
TP53-222	ENST00000617185	GOLGA5	Q8TBA6	731 aa		13.65	□□□□□ -0.22
TP53-222	ENST00000617185	LRRC59	Q96AG4	307 aa	Known RBP	13.65	□□□□□ -0.22
TP53-222	ENST00000617185	DRC1	Q96MC2	740 aa		13.65	□□□□□ -0.22
TP53-222	ENST00000617185	CCDC192	P0DO97	292 aa		13.64	□□□□□ -0.23
TP53-222	ENST00000617185	ATP2B1	P20020	1258 aa		13.64	□□□□□ -0.23
TP53-222	ENST00000617185	GIMAP6	Q6P9H5	292 aa		13.64	□□□□□ -0.23
TP53-222	ENST00000617185	FBXO18	Q8NFZ0	1043 aa		13.64	□□□□□ -0.23
TP53-222	ENST00000617185	DONSON	Q9NYP3	566 aa		13.64	□□□□□ -0.23
TP53-222	ENST00000617185	PIK3C2A	O00443	1686 aa		13.64	□□□□□ -0.23
TP53-222	ENST00000617185	SBNO1	A3KN83	1393 aa		13.64	□□□□□ -0.23
TP53-222	ENST00000617185	CHL1	O00533	1208 aa		13.64	□□□□□ -0.23
TP53-222	ENST00000617185	POLR3G	O15318	223 aa	Predicted RBP	13.64	□□□□□ -0.23
TP53-222	ENST00000617185	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.64	□□□□□ -0.23
TP53-222	ENST00000617185	NEK4	P51957	841 aa		13.63	□□□□□ -0.23
TP53-222	ENST00000617185	TTC22	Q5TAA0	569 aa		13.63	□□□□□ -0.23
TP53-222	ENST00000617185	CCDC91	Q7Z6B0	441 aa		13.63	□□□□□ -0.23
TP53-222	ENST00000617185	SMARCE1	Q969G3	411 aa		13.63	□□□□□ -0.23
TP53-222	ENST00000617185	CLCN6	P51797	869 aa		13.63	□□□□□ -0.23
TP53-222	ENST00000617185	PLEKHM2	Q8IWE5	1019 aa		13.63	□□□□□ -0.23
TP53-222	ENST00000617185	FAM200A	Q8TCP9	573 aa		13.63	□□□□□ -0.23
TP53-222	ENST00000617185	ERBB3	P21860	1342 aa		13.63	□□□□□ -0.23
TP53-222	ENST00000617185	KIF1C	O43896	1103 aa	Known RBP	13.63	□□□□□ -0.23
TP53-222	ENST00000617185	NYAP1	Q6ZVC0	841 aa		13.63	□□□□□ -0.23
TP53-222	ENST00000617185	PLEKHG2	Q9H7P9	1386 aa		13.62	□□□□□ -0.23
TP53-222	ENST00000617185	MAGEA9	P43362	315 aa		13.62	□□□□□ -0.23
TP53-222	ENST00000617185	ST5	P78524	1137 aa		13.62	□□□□□ -0.23
TP53-222	ENST00000617185	SATB1	Q01826	763 aa		13.62	□□□□□ -0.23
TP53-222	ENST00000617185	AK7	Q96M32	723 aa		13.62	□□□□□ -0.23
TP53-222	ENST00000617185	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.62	□□□□□ -0.23
TP53-222	ENST00000617185	IQUB	Q8NA54	791 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	MNS1	Q8NEH6	495 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	CXorf56	Q9H5V9	222 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	NRBP1	Q9UHY1	535 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	ABCC4	O15439	1325 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	IGSF1	Q8N6C5	1336 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	XRN1	Q8IZH2	1706 aa	Known RBP	13.61	□□□□□ -0.23
TP53-222	ENST00000617185	NPHP1	O15259	732 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
TP53-222	ENST00000617185	NBPF6	Q5VWK0	638 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	ZNF428	Q96B54	188 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	NBPF4	Q96M43	638 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	MEIS3	Q99687	375 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	PIK3R4	Q99570	1358 aa		13.61	□□□□□ -0.23
TP53-222	ENST00000617185	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.61	□□□□□ -0.23
TP53-222	ENST00000617185	KIF2A	O00139	706 aa	Predicted RBP	13.6	□□□□□ -0.23
TP53-222	ENST00000617185	ATP8B1	O43520	1251 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	TSGA10IP	Q3SY00	556 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	TMCO3	Q6UWJ1	677 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	PACS2	Q86VP3	889 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	EGFL6	Q8IUX8	553 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	CACTIN	Q8WUQ7	758 aa	Known RBP	13.6	□□□□□ -0.23
TP53-222	ENST00000617185	CNPY2	Q9Y2B0	182 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	ELP1	O95163	1332 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	NEMF	O60524	1076 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	HSP90B1	P14625	803 aa	Known RBP	13.6	□□□□□ -0.23
TP53-222	ENST00000617185	ERCC6L	Q2NKX8	1250 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.6	□□□□□ -0.23
TP53-222	ENST00000617185	IL17RE	Q8NFR9	667 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	SRCIN1	Q9C0H9	1055 aa		13.6	□□□□□ -0.23
TP53-222	ENST00000617185	CRB1	P82279	1406 aa		13.59	□□□□□ -0.23
TP53-222	ENST00000617185	GSC	P56915	257 aa	Predicted RBP	13.59	□□□□□ -0.23
TP53-222	ENST00000617185	SWT1	Q5T5J6	900 aa	Known RBP	13.59	□□□□□ -0.23
TP53-222	ENST00000617185	FILIP1	Q7Z7B0	1213 aa		13.59	□□□□□ -0.23
TP53-222	ENST00000617185	PLA2G4D	Q86XP0	818 aa		13.59	□□□□□ -0.23
TP53-222	ENST00000617185	TRIM5	Q9C035	493 aa		13.59	□□□□□ -0.23
TP53-222	ENST00000617185	PSD3	Q9NYI0	1048 aa		13.59	□□□□□ -0.23
TP53-222	ENST00000617185	NALCN	Q8IZF0	1738 aa		13.59	□□□□□ -0.23
TP53-222	ENST00000617185	ZNF75D	P51815	510 aa		13.59	□□□□□ -0.23
TP53-222	ENST00000617185	SART3	Q15020	963 aa	Known RBP	13.59	□□□□□ -0.23
TP53-222	ENST00000617185	GRIPAP1	Q4V328	841 aa		13.59	□□□□□ -0.23
TP53-222	ENST00000617185	PROSER2	Q86WR7	435 aa	Predicted RBP	13.59	□□□□□ -0.23
TP53-222	ENST00000617185	SUGP1	Q8IWZ8	645 aa	Known RBP	13.59	□□□□□ -0.23
TP53-222	ENST00000617185	UBXN6	Q9BZV1	441 aa		13.59	□□□□□ -0.23
TP53-222	ENST00000617185	API5	Q9BZZ5	524 aa	Known RBP	13.59	□□□□□ -0.23
TP53-222	ENST00000617185	TCHH	Q07283	1943 aa		13.59	□□□□□ -0.23
TP53-222	ENST00000617185	ARHGEF10	O15013	1369 aa		13.58	□□□□□ -0.23
TP53-222	ENST00000617185	MSH6	P52701	1360 aa		13.58	□□□□□ -0.23
TP53-222	ENST00000617185	ERC2	O15083	957 aa		13.58	□□□□□ -0.24
TP53-222	ENST00000617185	TPRN	Q4KMQ1	711 aa		13.58	□□□□□ -0.24
TP53-222	ENST00000617185	ARHGAP45	Q92619	1136 aa		13.58	□□□□□ -0.24
TP53-222	ENST00000617185	LGR6	Q9HBX8	967 aa		13.58	□□□□□ -0.24
TP53-222	ENST00000617185	MED4	Q9NPJ6	270 aa		13.58	□□□□□ -0.24
TP53-222	ENST00000617185	EXOC6B	Q9Y2D4	811 aa		13.58	□□□□□ -0.24
TP53-222	ENST00000617185	GNAT3	A8MTJ3	354 aa		13.58	□□□□□ -0.24
TP53-222	ENST00000617185	IVL	P07476	585 aa		13.58	□□□□□ -0.24
TP53-222	ENST00000617185	EIF2S2	P20042	333 aa	Known RBP	13.58	□□□□□ -0.24
TP53-222	ENST00000617185	HAP1	P54257	671 aa	Predicted RBP	13.58	□□□□□ -0.24
TP53-222	ENST00000617185	HSPA2	P54652	639 aa		13.58	□□□□□ -0.24
TP53-222	ENST00000617185	ZC3H6	P61129	1189 aa	Known RBP	13.57	□□□□□ -0.24
TP53-222	ENST00000617185	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms