RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 PZPP20742 1482 aa21.62■■□□□ 1.05
CDH23-212ENST00000616684 GOLGA6L10A6NI86 522 aa21.62■■□□□ 1.05
CDH23-212ENST00000616684 NLRP5P59047 1200 aa21.62■■□□□ 1.05
CDH23-212ENST00000616684 CRACR2BQ8N4Y2 399 aaPredicted RBP21.62■■□□□ 1.05
CDH23-212ENST00000616684 WDR7Q9Y4E6 1490 aa21.62■■□□□ 1.05
CDH23-212ENST00000616684 SHANK2Q9UPX8 1470 aa21.61■■□□□ 1.05
CDH23-212ENST00000616684 SF3B2Q13435 895 aaKnown RBP21.61■■□□□ 1.05
CDH23-212ENST00000616684 LINS1Q8NG48 757 aa21.61■■□□□ 1.05
CDH23-212ENST00000616684 TSPYL1Q9H0U9 437 aa21.61■■□□□ 1.05
CDH23-212ENST00000616684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.61■■□□□ 1.05
CDH23-212ENST00000616684 METAP2P50579 478 aaKnown RBP eCLIP21.61■■□□□ 1.05
CDH23-212ENST00000616684 STX1AQ16623 288 aa21.61■■□□□ 1.05
CDH23-212ENST00000616684 IQCEQ6IPM2 695 aa21.61■■□□□ 1.05
CDH23-212ENST00000616684 SEPT11Q9NVA2 429 aaKnown RBP21.61■■□□□ 1.05
CDH23-212ENST00000616684 ZNF397Q8NF99 534 aaPredicted RBP21.61■■□□□ 1.05
CDH23-212ENST00000616684 LRRC2Q9BYS8 371 aa21.61■■□□□ 1.05
CDH23-212ENST00000616684 CFAP43Q8NDM7 1665 aa21.6■■□□□ 1.05
CDH23-212ENST00000616684 URI1O94763 535 aaPredicted RBP21.6■■□□□ 1.05
CDH23-212ENST00000616684 MCM5P33992 734 aa21.6■■□□□ 1.05
CDH23-212ENST00000616684 GIMAP6Q6P9H5 292 aa21.6■■□□□ 1.05
CDH23-212ENST00000616684 ZSCAN16Q9H4T2 348 aaPredicted RBP21.6■■□□□ 1.05
CDH23-212ENST00000616684 PA2G4Q9UQ80 394 aaKnown RBP21.6■■□□□ 1.05
CDH23-212ENST00000616684 MFSD6Q6ZSS7 791 aa21.6■■□□□ 1.05
CDH23-212ENST00000616684 PANK2Q9BZ23 570 aa21.6■■□□□ 1.05
CDH23-212ENST00000616684 EYA1Q99502 592 aa21.59■■□□□ 1.05
CDH23-212ENST00000616684 TRMT1Q9NXH9 659 aaKnown RBP21.59■■□□□ 1.05
CDH23-212ENST00000616684 LRRC59Q96AG4 307 aaKnown RBP21.59■■□□□ 1.05
CDH23-212ENST00000616684 C16orf45Q96MC5 204 aaPredicted RBP21.59■■□□□ 1.05
CDH23-212ENST00000616684 COL17A1Q9UMD9 1497 aaPredicted RBP21.59■■□□□ 1.05
CDH23-212ENST00000616684 TNNT1P13805 278 aa21.59■■□□□ 1.05
CDH23-212ENST00000616684 ABCC10Q5T3U5 1492 aa21.59■■□□□ 1.05
CDH23-212ENST00000616684 KLF18A0A0U1RQI7 1052 aa21.58■■□□□ 1.05
CDH23-212ENST00000616684 SEC24BO95487 1268 aa21.58■■□□□ 1.05
CDH23-212ENST00000616684 LRSAM1Q6UWE0 723 aa21.58■■□□□ 1.05
CDH23-212ENST00000616684 ZFYP08048 801 aaPredicted RBP21.58■■□□□ 1.05
CDH23-212ENST00000616684 ZCRB1Q8TBF4 217 aaKnown RBP21.58■■□□□ 1.05
CDH23-212ENST00000616684 NEMFO60524 1076 aa21.58■■□□□ 1.04
CDH23-212ENST00000616684 CAVIN2O95810 425 aa21.58■■□□□ 1.04
CDH23-212ENST00000616684 UVSSAQ2YD98 709 aa21.58■■□□□ 1.04
CDH23-212ENST00000616684 PLEKHM2Q8IWE5 1019 aa21.58■■□□□ 1.04
CDH23-212ENST00000616684 UQCRFS1P1P0C7P4 283 aa21.58■■□□□ 1.04
CDH23-212ENST00000616684 RAB34Q9BZG1 259 aa21.58■■□□□ 1.04
CDH23-212ENST00000616684 TMCO3Q6UWJ1 677 aa21.57■■□□□ 1.04
CDH23-212ENST00000616684 SLC26A6Q9BXS9 759 aa21.57■■□□□ 1.04
CDH23-212ENST00000616684 CNPY2Q9Y2B0 182 aa21.57■■□□□ 1.04
CDH23-212ENST00000616684 NCKAP5LQ9HCH0 1330 aa21.57■■□□□ 1.04
CDH23-212ENST00000616684 ATP2B3Q16720 1220 aa21.57■■□□□ 1.04
CDH23-212ENST00000616684 KIF4BQ2VIQ3 1234 aa21.57■■□□□ 1.04
CDH23-212ENST00000616684 FKBP15Q5T1M5 1219 aa21.57■■□□□ 1.04
CDH23-212ENST00000616684 CPLX3Q8WVH0 158 aa21.57■■□□□ 1.04
CDH23-212ENST00000616684 HMGB2P26583 209 aaKnown RBP21.57■■□□□ 1.04
CDH23-212ENST00000616684 CENPHQ9H3R5 247 aa21.57■■□□□ 1.04
CDH23-212ENST00000616684 KIF5CO60282 957 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 ZFYVE9O95405 1425 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 GSDMDP57764 484 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 SPA17Q15506 151 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 MCMDC2Q4G0Z9 681 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 WWC2Q6AWC2 1192 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 CCDC148Q8NFR7 591 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 TAF4BQ92750 862 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 NGLY1Q96IV0 654 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 IL15P40933 162 aaPredicted RBP21.56■■□□□ 1.04
CDH23-212ENST00000616684 FAM193AP78312 1265 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 CCDC102AQ96A19 550 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
CDH23-212ENST00000616684 CCDC96Q2M329 555 aa21.55■■□□□ 1.04
CDH23-212ENST00000616684 CCDC102BQ68D86 513 aa21.55■■□□□ 1.04
CDH23-212ENST00000616684 TSPY2A6NKD2 308 aa21.55■■□□□ 1.04
CDH23-212ENST00000616684 XRCC6P12956 609 aaKnown RBP eCLIP21.55■■□□□ 1.04
CDH23-212ENST00000616684 TMC6Q7Z403 805 aa21.55■■□□□ 1.04
CDH23-212ENST00000616684 USP48Q86UV5 1035 aa21.55■■□□□ 1.04
CDH23-212ENST00000616684 RPGRQ92834 1020 aaKnown RBP21.55■■□□□ 1.04
CDH23-212ENST00000616684 CWF19L2Q2TBE0 894 aaKnown RBP21.55■■□□□ 1.04
CDH23-212ENST00000616684 ABCC1P33527 1531 aa21.55■■□□□ 1.04
CDH23-212ENST00000616684 MAP3K19Q56UN5 1328 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 PPP1R12BO60237 982 aaPredicted RBP21.54■■□□□ 1.04
CDH23-212ENST00000616684 ISM2Q6H9L7 571 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 NPHP3Q7Z494 1330 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 UHRF1BP1Q6BDS2 1440 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 ZBTB7BO15156 539 aaPredicted RBP21.54■■□□□ 1.04
CDH23-212ENST00000616684 LDHCP07864 332 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 KIF5BP33176 963 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 TMEM266Q2M3C6 531 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 NPC1L1Q9UHC9 1359 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 TTC41PQ6P2S7 1318 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 C6orf229H3BNL8 230 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 CACNA2D4Q7Z3S7 1137 aa21.54■■□□□ 1.04
CDH23-212ENST00000616684 NFATC2IPQ8NCF5 419 aa21.53■■□□□ 1.04
CDH23-212ENST00000616684 NMIQ13287 307 aaPredicted RBP21.53■■□□□ 1.04
CDH23-212ENST00000616684 SLF2Q8IX21 1173 aa21.53■■□□□ 1.04
CDH23-212ENST00000616684 PDE4BQ07343 736 aa21.53■■□□□ 1.04
CDH23-212ENST00000616684 FBXO3Q9UK99 471 aa21.53■■□□□ 1.04
CDH23-212ENST00000616684 SOS1Q07889 1333 aaPredicted RBP21.53■■□□□ 1.04
CDH23-212ENST00000616684 TSG101Q99816 390 aa21.52■■□□□ 1.04
CDH23-212ENST00000616684 MAP3K5Q99683 1374 aa21.52■■□□□ 1.04
CDH23-212ENST00000616684 ZBTB43O43298 467 aa21.52■■□□□ 1.04
CDH23-212ENST00000616684 NEFHP12036 1026 aa21.52■■□□□ 1.04
CDH23-212ENST00000616684 GBP3Q9H0R5 595 aa21.52■■□□□ 1.04
CDH23-212ENST00000616684 Q6ZUG5 572 aa21.52■■□□□ 1.04
CDH23-212ENST00000616684 NUP88Q99567 741 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms