RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, human

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FMR1-216	ENST00000616614	IGKV5-2	P06315	115 aa		40.66	■■■■■ 4.1
FMR1-216	ENST00000616614		F6X3S4	739 aa		40.65	■■■■■ 4.1
FMR1-216	ENST00000616614	RARS	P54136	660 aa	Known RBP	40.65	■■■■■ 4.1
FMR1-216	ENST00000616614	ANKRD31	Q8N7Z5	1873 aa		40.64	■■■■■ 4.1
FMR1-216	ENST00000616614	C2CD5	Q86YS7	1000 aa		40.64	■■■■■ 4.1
FMR1-216	ENST00000616614	DNAAF4	Q8WXU2	420 aa		40.64	■■■■■ 4.1
FMR1-216	ENST00000616614	SMC4	Q9NTJ3	1288 aa		40.64	■■■■■ 4.1
FMR1-216	ENST00000616614	N4BP2	Q86UW6	1770 aa	Predicted RBP	40.64	■■■■■ 4.1
FMR1-216	ENST00000616614	PDE6B	P35913	854 aa		40.63	■■■■■ 4.09
FMR1-216	ENST00000616614	TRMT112	Q9UI30	125 aa	Known RBP	40.63	■■■■■ 4.09
FMR1-216	ENST00000616614	CACNA1F	O60840	1977 aa		40.61	■■■■■ 4.09
FMR1-216	ENST00000616614	YBX3	P16989	372 aa	Known RBP eCLIP	40.61	■■■■■ 4.09
FMR1-216	ENST00000616614	KLRG2	A4D1S0	409 aa	Predicted RBP	40.6	■■■■■ 4.09
FMR1-216	ENST00000616614	CWF19L2	Q2TBE0	894 aa	Known RBP	40.6	■■■■■ 4.09
FMR1-216	ENST00000616614		H0YIN7	160 aa		40.59	■■■■■ 4.09
FMR1-216	ENST00000616614	SLC10A5	Q5PT55	438 aa		40.59	■■■■■ 4.09
FMR1-216	ENST00000616614	C3orf67	Q6ZVT6	689 aa		40.59	■■■■■ 4.09
FMR1-216	ENST00000616614	PELP1	Q8IZL8	1130 aa	Known RBP	40.59	■■■■■ 4.09
FMR1-216	ENST00000616614	CCDC191	Q8NCU4	936 aa		40.59	■■■■■ 4.09
FMR1-216	ENST00000616614	FAM89A	Q96GI7	184 aa		40.59	■■■■■ 4.09
FMR1-216	ENST00000616614	YTHDC1	Q96MU7	727 aa	Known RBP	40.59	■■■■■ 4.09
FMR1-216	ENST00000616614	SH3TC1	Q8TE82	1336 aa		40.57	■■■■■ 4.08
FMR1-216	ENST00000616614	RNF123	Q5XPI4	1314 aa		40.56	■■■■■ 4.08
FMR1-216	ENST00000616614	NEURL1B	A8MQ27	555 aa		40.56	■■■■■ 4.08
FMR1-216	ENST00000616614	SRGN	P10124	158 aa		40.56	■■■■■ 4.08
FMR1-216	ENST00000616614	NEXN	Q0ZGT2	675 aa		40.56	■■■■■ 4.08
FMR1-216	ENST00000616614	GPR162	Q16538	588 aa		40.56	■■■■■ 4.08
FMR1-216	ENST00000616614	RTL5	Q5HYW3	569 aa	Predicted RBP	40.56	■■■■■ 4.08
FMR1-216	ENST00000616614	CWC25	Q9NXE8	425 aa	Predicted RBP	40.56	■■■■■ 4.08
FMR1-216	ENST00000616614	PIM2	Q9P1W9	311 aa		40.56	■■■■■ 4.08
FMR1-216	ENST00000616614	UTRN	P46939	3433 aa		40.56	■■■■■ 4.08
FMR1-216	ENST00000616614	HCLS1	P14317	486 aa	Predicted RBP	40.55	■■■■■ 4.08
FMR1-216	ENST00000616614	BRPF1	P55201	1214 aa	Predicted RBP	40.55	■■■■■ 4.08
FMR1-216	ENST00000616614	JARID2	Q92833	1246 aa	Predicted RBP	40.55	■■■■■ 4.08
FMR1-216	ENST00000616614	TNRC6C	Q9HCJ0	1690 aa	Known RBP	40.54	■■■■■ 4.08
FMR1-216	ENST00000616614	BEND3	Q5T5X7	828 aa		40.54	■■■■■ 4.08
FMR1-216	ENST00000616614	PTPRC	P08575	1304 aa		40.53	■■■■■ 4.08
FMR1-216	ENST00000616614	RIC1	Q4ADV7	1423 aa		40.53	■■■■■ 4.08
FMR1-216	ENST00000616614	NOB1	Q9ULX3	412 aa	Known RBP	40.53	■■■■■ 4.08
FMR1-216	ENST00000616614	PDZRN3	Q9UPQ7	1066 aa		40.53	■■■■■ 4.08
FMR1-216	ENST00000616614	BCAR3	O75815	825 aa		40.52	■■■■■ 4.08
FMR1-216	ENST00000616614	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	40.52	■■■■■ 4.08
FMR1-216	ENST00000616614	LINS1	Q8NG48	757 aa		40.52	■■■■■ 4.08
FMR1-216	ENST00000616614	COL11A2	P13942	1736 aa	Predicted RBP	40.52	■■■■■ 4.08
FMR1-216	ENST00000616614	CRY2	Q49AN0	593 aa		40.51	■■■■■ 4.08
FMR1-216	ENST00000616614	BCS1L	Q9Y276	419 aa		40.51	■■■■■ 4.08
FMR1-216	ENST00000616614	ZNF622	Q969S3	477 aa	Known RBP eCLIP	40.5	■■■■■ 4.07	1e-13	■■□□□ 14.5
FMR1-216	ENST00000616614	PCCA	P05165	728 aa	Predicted RBP	40.49	■■■■■ 4.07
FMR1-216	ENST00000616614	SLC4A10	Q6U841	1118 aa		40.49	■■■■■ 4.07
FMR1-216	ENST00000616614	GCKR	Q14397	625 aa		40.48	■■■■■ 4.07
FMR1-216	ENST00000616614	DALRD3	Q5D0E6	543 aa	Known RBP	40.48	■■■■■ 4.07
FMR1-216	ENST00000616614	STYK1	Q6J9G0	422 aa		40.48	■■■■■ 4.07
FMR1-216	ENST00000616614	MASTL	Q96GX5	879 aa		40.48	■■■■■ 4.07
FMR1-216	ENST00000616614	NLRP3	Q96P20	1036 aa		40.47	■■■■■ 4.07
FMR1-216	ENST00000616614	BRCA1	P38398	1863 aa	Known RBP	40.47	■■■■■ 4.07
FMR1-216	ENST00000616614	NPR1	P16066	1061 aa		40.46	■■■■■ 4.07
FMR1-216	ENST00000616614	IRS4	O14654	1257 aa	Predicted RBP	40.45	■■■■■ 4.07
FMR1-216	ENST00000616614	TTLL6	Q8N841	843 aa		40.45	■■■■■ 4.07
FMR1-216	ENST00000616614	DLEC1	Q9Y238	1755 aa		40.45	■■■■■ 4.07
FMR1-216	ENST00000616614	DCAF8L1	A6NGE4	600 aa		40.43	■■■■■ 4.06
FMR1-216	ENST00000616614		H7C1W4	665 aa		40.43	■■■■■ 4.06
FMR1-216	ENST00000616614	CASP7	P55210	303 aa		40.41	■■■■■ 4.06
FMR1-216	ENST00000616614	HOXA10	P31260	410 aa	Predicted RBP	40.4	■■■■■ 4.06
FMR1-216	ENST00000616614	CNKSR1	Q969H4	720 aa		40.4	■■■■■ 4.06
FMR1-216	ENST00000616614	SRCIN1	Q9C0H9	1055 aa		40.4	■■■■■ 4.06
FMR1-216	ENST00000616614	UBE3B	Q7Z3V4	1068 aa		40.39	■■■■■ 4.06
FMR1-216	ENST00000616614	KIF16B	Q96L93	1317 aa		40.39	■■■■■ 4.06
FMR1-216	ENST00000616614	DDX60	Q8IY21	1712 aa	Known RBP	40.39	■■■■■ 4.06
FMR1-216	ENST00000616614	CDHR2	Q9BYE9	1310 aa		40.38	■■■■■ 4.05
FMR1-216	ENST00000616614	PRPF40B	Q6NWY9	871 aa	Known RBP	40.38	■■■■■ 4.05
FMR1-216	ENST00000616614	RPGR	Q92834	1020 aa	Known RBP	40.38	■■■■■ 4.05
FMR1-216	ENST00000616614	GRIN3B	O60391	1043 aa		40.37	■■■■■ 4.05
FMR1-216	ENST00000616614	ALDH1L1	O75891	902 aa		40.37	■■■■■ 4.05
FMR1-216	ENST00000616614	ARHGAP45	Q92619	1136 aa		40.37	■■■■■ 4.05
FMR1-216	ENST00000616614	FRAT1	Q92837	279 aa	Predicted RBP	40.36	■■■■■ 4.05
FMR1-216	ENST00000616614	TNN	Q9UQP3	1299 aa		40.36	■■■■■ 4.05
FMR1-216	ENST00000616614	SF3B3	Q15393	1217 aa	Known RBP	40.35	■■■■■ 4.05
FMR1-216	ENST00000616614	API5	Q9BZZ5	524 aa	Known RBP	40.35	■■■■■ 4.05
FMR1-216	ENST00000616614	RBM17	Q96I25	401 aa	Known RBP	40.34	■■■■■ 4.05
FMR1-216	ENST00000616614	ZNF219	Q9P2Y4	722 aa	Predicted RBP	40.34	■■■■■ 4.05
FMR1-216	ENST00000616614	PDE8A	O60658	829 aa		40.33	■■■■■ 4.05
FMR1-216	ENST00000616614	C7orf43	Q8WVR3	580 aa		40.33	■■■■■ 4.05
FMR1-216	ENST00000616614	CRAMP1	Q96RY5	1269 aa		40.33	■■■■■ 4.05
FMR1-216	ENST00000616614	C21orf2	O43822	256 aa		40.32	■■■■■ 4.04
FMR1-216	ENST00000616614	ALDH1B1	P30837	517 aa		40.32	■■■■■ 4.04
FMR1-216	ENST00000616614	LAMB2	P55268	1798 aa		40.32	■■■■■ 4.04
FMR1-216	ENST00000616614	GRM8	O00222	908 aa		40.31	■■■■■ 4.04
FMR1-216	ENST00000616614	TRIM27	P14373	513 aa		40.31	■■■■■ 4.04
FMR1-216	ENST00000616614	SLC51A	Q86UW1	340 aa		40.31	■■■■■ 4.04
FMR1-216	ENST00000616614	SLX4	Q8IY92	1834 aa		40.3	■■■■■ 4.04
FMR1-216	ENST00000616614	ABCC4	O15439	1325 aa		40.29	■■■■■ 4.04
FMR1-216	ENST00000616614	IPO8	O15397	1037 aa	Known RBP	40.29	■■■■■ 4.04
FMR1-216	ENST00000616614	ATF7IP	Q6VMQ6	1270 aa		40.29	■■■■■ 4.04
FMR1-216	ENST00000616614	HSP90B1	P14625	803 aa	Known RBP	40.28	■■■■■ 4.04
FMR1-216	ENST00000616614	OLFM4	Q6UX06	510 aa		40.28	■■■■■ 4.04
FMR1-216	ENST00000616614	ARHGAP27	Q6ZUM4	889 aa		40.28	■■■■■ 4.04
FMR1-216	ENST00000616614	CCDC85A	Q96PX6	553 aa	Predicted RBP	40.27	■■■■■ 4.04
FMR1-216	ENST00000616614	PLA2G12B	Q9BX93	195 aa		40.27	■■■■■ 4.04
FMR1-216	ENST00000616614	C9orf78	Q9NZ63	289 aa	Predicted RBP	40.27	■■■■■ 4.04
FMR1-216	ENST00000616614	NBPF7	P0C2Y1	421 aa	Predicted RBP	40.26	■■■■■ 4.04

Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms