RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 CADPS2Q86UW7 1296 aa10.35□□□□□ -0.75
PCDH15-229ENST00000616114 FSIP1Q8NA03 581 aa10.35□□□□□ -0.75
PCDH15-229ENST00000616114 XAGE3Q8WTP9 111 aa10.35□□□□□ -0.75
PCDH15-229ENST00000616114 CHD1O14646 1710 aa10.35□□□□□ -0.75
PCDH15-229ENST00000616114 IL15P40933 162 aaPredicted RBP10.35□□□□□ -0.75
PCDH15-229ENST00000616114 NCOA7Q8NI08 942 aa10.35□□□□□ -0.75
PCDH15-229ENST00000616114 GOLGA8BA8MQT2 603 aa10.35□□□□□ -0.75
PCDH15-229ENST00000616114 CDR1P51861 262 aa10.35□□□□□ -0.75
PCDH15-229ENST00000616114 CAGE1Q8TC20 777 aa10.35□□□□□ -0.75
PCDH15-229ENST00000616114 EFCAB6Q5THR3 1501 aa10.35□□□□□ -0.75
PCDH15-229ENST00000616114 HMGB2P26583 209 aaKnown RBP10.34□□□□□ -0.75
PCDH15-229ENST00000616114 KIF18AQ8NI77 898 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 ERLIN1O75477 346 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 UQCRFS1P1P0C7P4 283 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 ZKSCAN5Q9Y2L8 839 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 HECW2Q9P2P5 1572 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 RAD21O60216 631 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 EPS15P42566 896 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 ZNF165P49910 485 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 SSRP1Q08945 709 aaKnown RBP10.34□□□□□ -0.75
PCDH15-229ENST00000616114 CCAR1Q8IX12 1150 aaKnown RBP10.34□□□□□ -0.75
PCDH15-229ENST00000616114 FAM200AQ8TCP9 573 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 LUC7LQ9NQ29 371 aaKnown RBP10.34□□□□□ -0.75
PCDH15-229ENST00000616114 TCEAL9Q9UHQ7 104 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 CNPY2Q9Y2B0 182 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 RTL1A6NKG5 1358 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 SSH2Q76I76 1423 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 RNMTO43148 476 aaKnown RBP10.34□□□□□ -0.75
PCDH15-229ENST00000616114 SOGA3Q5TF21 947 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 CKAP2LQ8IYA6 745 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 AK2P54819 239 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 NAP1L1P55209 391 aaKnown RBP10.34□□□□□ -0.75
PCDH15-229ENST00000616114 CFAP100Q494V2 611 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 NOM1Q5C9Z4 860 aaKnown RBP10.34□□□□□ -0.75
PCDH15-229ENST00000616114 COPS6Q7L5N1 327 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 PANK2Q9BZ23 570 aa10.34□□□□□ -0.75
PCDH15-229ENST00000616114 ANXA1P04083 346 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 NMIQ13287 307 aaPredicted RBP10.33□□□□□ -0.76
PCDH15-229ENST00000616114 TFIP11Q9UBB9 837 aaKnown RBP10.33□□□□□ -0.76
PCDH15-229ENST00000616114 RUFY3Q7L099 469 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 G2E3Q7L622 706 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 ZNF287Q9HBT7 754 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 USP16Q9Y5T5 823 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 CAVIN4Q5BKX8 364 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 DDX21Q9NR30 783 aaKnown RBP eCLIP10.33□□□□□ -0.76
PCDH15-229ENST00000616114 TRMT112Q9UI30 125 aaKnown RBP10.33□□□□□ -0.76
PCDH15-229ENST00000616114 TMEM2Q9UHN6 1383 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 ZNF445P59923 1031 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 CREB3L3Q68CJ9 461 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 ATL3Q6DD88 541 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 LARP6Q9BRS8 491 aaKnown RBP10.33□□□□□ -0.76
PCDH15-229ENST00000616114 CTDP1Q9Y5B0 961 aaPredicted RBP10.33□□□□□ -0.76
PCDH15-229ENST00000616114 CLTCL1P53675 1640 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 SPHKAPQ2M3C7 1700 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 UGGT1Q9NYU2 1555 aa10.33□□□□□ -0.76
PCDH15-229ENST00000616114 GOLGA8AA7E2F4 631 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 OFD1O75665 1012 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
PCDH15-229ENST00000616114 ZGPATQ8N5A5 531 aaKnown RBP10.32□□□□□ -0.76
PCDH15-229ENST00000616114 NPHP3Q7Z494 1330 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 HCLS1P14317 486 aaPredicted RBP10.32□□□□□ -0.76
PCDH15-229ENST00000616114 PYM1Q9BRP8 204 aaKnown RBP10.32□□□□□ -0.76
PCDH15-229ENST00000616114 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 CCT2P78371 535 aaKnown RBP10.32□□□□□ -0.76
PCDH15-229ENST00000616114 KANK3Q6NY19 840 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 KCNG4Q8TDN1 519 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 CGNQ9P2M7 1197 aaKnown RBP10.32□□□□□ -0.76
PCDH15-229ENST00000616114 ORC3Q9UBD5 711 aaPredicted RBP10.32□□□□□ -0.76
PCDH15-229ENST00000616114 POLR1AO95602 1720 aaPredicted RBP10.32□□□□□ -0.76
PCDH15-229ENST00000616114 BRF1Q92994 677 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 PAXBP1Q9Y5B6 917 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 NCKAP5LQ9HCH0 1330 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 CCDC150Q8NCX0 1101 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 CCDC85AQ96PX6 553 aaPredicted RBP10.32□□□□□ -0.76
PCDH15-229ENST00000616114 ZBTB3Q9H5J0 574 aa10.32□□□□□ -0.76
PCDH15-229ENST00000616114 MADDQ8WXG6 1647 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 EIF3JO75822 258 aaKnown RBP10.31□□□□□ -0.76
PCDH15-229ENST00000616114 MEX3CQ5U5Q3 659 aaKnown RBP10.31□□□□□ -0.76
PCDH15-229ENST00000616114 NECAB1Q8N987 351 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 LRRIQ1Q96JM4 1722 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 CCDC171Q6TFL3 1326 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 IFIT3O14879 490 aaKnown RBP10.31□□□□□ -0.76
PCDH15-229ENST00000616114 IARSP41252 1262 aaKnown RBP10.31□□□□□ -0.76
PCDH15-229ENST00000616114 IQCEQ6IPM2 695 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 GIMAP6Q6P9H5 292 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 DCAF5Q96JK2 942 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 TNNT1P13805 278 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 LDHAL6AQ6ZMR3 332 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 UBXN4Q92575 508 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 ARHGAP31Q2M1Z3 1444 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 GOLGA6L9A6NEM1 432 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 TOP1P11387 765 aaKnown RBP10.31□□□□□ -0.76
PCDH15-229ENST00000616114 IQCA1Q86XH1 822 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 ZCRB1Q8TBF4 217 aaKnown RBP10.31□□□□□ -0.76
PCDH15-229ENST00000616114 TUBB4AP04350 444 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 MYO6Q9UM54 1294 aa10.31□□□□□ -0.76
PCDH15-229ENST00000616114 GCP02774 474 aa10.3□□□□□ -0.76
PCDH15-229ENST00000616114 Q6ZUG5 572 aa10.3□□□□□ -0.76
PCDH15-229ENST00000616114 CNNM3Q8NE01 707 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms