RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
RDM1-218ENST00000615288 LINS1Q8NG48 757 aa11.8□□□□□ -0.52
RDM1-218ENST00000615288 ANKRD7Q92527 254 aa11.8□□□□□ -0.52
RDM1-218ENST00000615288 LLPHQ9BRT6 129 aaKnown RBP11.8□□□□□ -0.52
RDM1-218ENST00000615288 CLSTN2Q9H4D0 955 aa11.8□□□□□ -0.52
RDM1-218ENST00000615288 ZSCAN16Q9H4T2 348 aaPredicted RBP11.8□□□□□ -0.52
RDM1-218ENST00000615288 KIF1AQ12756 1690 aa11.79□□□□□ -0.52
RDM1-218ENST00000615288 RPS6KB1P23443 525 aa11.79□□□□□ -0.52
RDM1-218ENST00000615288 RBM10P98175 930 aaKnown RBP11.79□□□□□ -0.52
RDM1-218ENST00000615288 TYRO3Q06418 890 aa11.79□□□□□ -0.52
RDM1-218ENST00000615288 OS9Q13438 667 aaPredicted RBP11.79□□□□□ -0.52
RDM1-218ENST00000615288 PLEKHO1Q53GL0 409 aaPredicted RBP11.79□□□□□ -0.52
RDM1-218ENST00000615288 BLOC1S2Q6QNY1 142 aa11.79□□□□□ -0.52
RDM1-218ENST00000615288 CWC27Q6UX04 472 aaKnown RBP11.79□□□□□ -0.52
RDM1-218ENST00000615288 CCDC83Q8IWF9 413 aa11.79□□□□□ -0.52
RDM1-218ENST00000615288 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
RDM1-218ENST00000615288 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
RDM1-218ENST00000615288 KCND1Q9NSA2 647 aa11.79□□□□□ -0.52
RDM1-218ENST00000615288 PAXBP1Q9Y5B6 917 aa11.79□□□□□ -0.52
RDM1-218ENST00000615288 RBM8AQ9Y5S9 174 aaKnown RBP11.79□□□□□ -0.52
RDM1-218ENST00000615288 TCHHQ07283 1943 aa11.79□□□□□ -0.52
RDM1-218ENST00000615288 MYH15Q9Y2K3 1946 aa11.78□□□□□ -0.52
RDM1-218ENST00000615288 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
RDM1-218ENST00000615288 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
RDM1-218ENST00000615288 FAM193AP78312 1265 aa11.78□□□□□ -0.52
RDM1-218ENST00000615288 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
RDM1-218ENST00000615288 DMTNQ08495 405 aa11.78□□□□□ -0.52
RDM1-218ENST00000615288 TEFQ10587 303 aa11.78□□□□□ -0.52
RDM1-218ENST00000615288 NOL8Q76FK4 1167 aaKnown RBP11.78□□□□□ -0.52
RDM1-218ENST00000615288 PLA2G4DQ86XP0 818 aa11.78□□□□□ -0.52
RDM1-218ENST00000615288 THEMISQ8N1K5 641 aaPredicted RBP11.78□□□□□ -0.52
RDM1-218ENST00000615288 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
RDM1-218ENST00000615288 CHPF2Q9P2E5 772 aa11.78□□□□□ -0.52
RDM1-218ENST00000615288 PARP4Q9UKK3 1724 aaKnown RBP11.77□□□□□ -0.52
RDM1-218ENST00000615288 SMTNL1A8MU46 457 aa11.77□□□□□ -0.53
RDM1-218ENST00000615288 KIF2AO00139 706 aaPredicted RBP11.77□□□□□ -0.53
RDM1-218ENST00000615288 SLC27A2O14975 620 aa11.77□□□□□ -0.53
RDM1-218ENST00000615288 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
RDM1-218ENST00000615288 ST3GAL1Q11201 340 aa11.77□□□□□ -0.53
RDM1-218ENST00000615288 ME3Q16798 604 aa11.77□□□□□ -0.53
RDM1-218ENST00000615288 LARP1BQ659C4 914 aaKnown RBP11.77□□□□□ -0.53
RDM1-218ENST00000615288 PRPF40BQ6NWY9 871 aaKnown RBP11.77□□□□□ -0.53
RDM1-218ENST00000615288 PHAXQ9H814 394 aaKnown RBP11.77□□□□□ -0.53
RDM1-218ENST00000615288 TTC12Q9H892 705 aaPredicted RBP11.77□□□□□ -0.53
RDM1-218ENST00000615288 PRDM4Q9UKN5 801 aa11.77□□□□□ -0.53
RDM1-218ENST00000615288 CFAP45Q9UL16 551 aa11.77□□□□□ -0.53
RDM1-218ENST00000615288 MRVI1Q9Y6F6 885 aa11.77□□□□□ -0.53
RDM1-218ENST00000615288 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.53
RDM1-218ENST00000615288 VPS37CA5D8V6 355 aaPredicted RBP11.76□□□□□ -0.53
RDM1-218ENST00000615288 GRM8O00222 908 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 KIF20AO95235 890 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 LARGE1O95461 756 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 TUBB4AP04350 444 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 PTH1RQ03431 593 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 MLECQ14165 292 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 NAA16Q6N069 864 aaPredicted RBP11.76□□□□□ -0.53
RDM1-218ENST00000615288 GIMAP6Q6P9H5 292 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 TTC6Q86TZ1 520 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 CREBRFQ8IUR6 639 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 MRFAP1L1Q96HT8 127 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 TNMDQ9H2S6 317 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 KCNF1Q9H3M0 494 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 SPG7Q9UQ90 795 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 U3KPZ7 1027 aaPredicted RBP11.76□□□□□ -0.53
RDM1-218ENST00000615288 TMEM94Q12767 1356 aa11.76□□□□□ -0.53
RDM1-218ENST00000615288 GOLGA6L4A6NEF3 574 aa11.75□□□□□ -0.53
RDM1-218ENST00000615288 KCNJ6P48051 423 aa11.75□□□□□ -0.53
RDM1-218ENST00000615288 ZNF75DP51815 510 aa11.75□□□□□ -0.53
RDM1-218ENST00000615288 GTF3C6Q969F1 213 aa11.75□□□□□ -0.53
RDM1-218ENST00000615288 SPATA32Q96LK8 384 aa11.75□□□□□ -0.53
RDM1-218ENST00000615288 DDX21Q9NR30 783 aaKnown RBP eCLIP11.75□□□□□ -0.53
RDM1-218ENST00000615288 C9orf78Q9NZ63 289 aaPredicted RBP11.75□□□□□ -0.53
RDM1-218ENST00000615288 TPCN1Q9ULQ1 816 aa11.75□□□□□ -0.53
RDM1-218ENST00000615288 SCN11AQ9UI33 1791 aa11.74□□□□□ -0.53
RDM1-218ENST00000615288 BTBD11A6QL63 1104 aa11.74□□□□□ -0.53
RDM1-218ENST00000615288 ATP5JP18859 108 aa11.74□□□□□ -0.53
RDM1-218ENST00000615288 KCNJ4P48050 445 aa11.74□□□□□ -0.53
RDM1-218ENST00000615288 G3BP1Q13283 466 aaKnown RBP eCLIP11.74□□□□□ -0.53
RDM1-218ENST00000615288 ADCK5Q3MIX3 580 aa11.74□□□□□ -0.53
RDM1-218ENST00000615288 AACSQ86V21 672 aa11.74□□□□□ -0.53
RDM1-218ENST00000615288 ABTB2Q8N961 1025 aa11.74□□□□□ -0.53
RDM1-218ENST00000615288 LEO1Q8WVC0 666 aaPredicted RBP11.74□□□□□ -0.53
RDM1-218ENST00000615288 BCL2L12Q9HB09 334 aa11.74□□□□□ -0.53
RDM1-218ENST00000615288 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
RDM1-218ENST00000615288 TRPM3Q9HCF6 1732 aaPredicted RBP11.74□□□□□ -0.53
RDM1-218ENST00000615288 RBM6P78332 1123 aaKnown RBP11.73□□□□□ -0.53
RDM1-218ENST00000615288 RESTQ13127 1097 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 NMIQ13287 307 aaPredicted RBP11.73□□□□□ -0.53
RDM1-218ENST00000615288 STX1AQ16623 288 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 SLFNL1Q499Z3 407 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 TAF3Q5VWG9 929 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 CYB5RLQ6IPT4 315 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 LARP1Q6PKG0 1096 aaKnown RBP11.73□□□□□ -0.53
RDM1-218ENST00000615288 CDC37L1Q7L3B6 337 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 FBXL16Q8N461 479 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 SMARCC2Q8TAQ2 1214 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 SH3TC1Q8TE82 1336 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 PXDNQ92626 1479 aa11.73□□□□□ -0.53
RDM1-218ENST00000615288 CBX8Q9HC52 389 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms