RNA–Protein interactions for RNA: ENST00000615093.1

RAB43-208, Transcript of RAB43, member RAS oncogene family, human

TSL 5 BASIC

Gene RAB43, Length 783 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB43-208	ENST00000615093	CHPF2	Q9P2E5	772 aa		28.1	■■■□□ 2.09
RAB43-208	ENST00000615093	IFT57	Q9NWB7	429 aa		28.09	■■■□□ 2.09
RAB43-208	ENST00000615093	CALD1	Q05682	793 aa	Known RBP	28.08	■■■□□ 2.09
RAB43-208	ENST00000615093	HSP90AB3P	Q58FF7	597 aa		28.08	■■■□□ 2.09
RAB43-208	ENST00000615093	HOXA10	P31260	410 aa	Predicted RBP	28.07	■■■□□ 2.08
RAB43-208	ENST00000615093	GNAI1	P63096	354 aa		28.07	■■■□□ 2.08
RAB43-208	ENST00000615093	DUSP27	Q5VZP5	1158 aa		28.07	■■■□□ 2.08
RAB43-208	ENST00000615093	OLFM4	Q6UX06	510 aa		28.07	■■■□□ 2.08
RAB43-208	ENST00000615093	FKBP4	Q02790	459 aa	Known RBP eCLIP	28.06	■■■□□ 2.08
RAB43-208	ENST00000615093	DPY19L2	Q6NUT2	758 aa		28.06	■■■□□ 2.08
RAB43-208	ENST00000615093	RPGR	Q92834	1020 aa	Known RBP	28.06	■■■□□ 2.08
RAB43-208	ENST00000615093	UTP14A	Q9BVJ6	771 aa	Known RBP	28.06	■■■□□ 2.08
RAB43-208	ENST00000615093	DBF4	Q9UBU7	674 aa	Predicted RBP	28.06	■■■□□ 2.08
RAB43-208	ENST00000615093	WDR90	Q96KV7	1748 aa		28.06	■■■□□ 2.08
RAB43-208	ENST00000615093	TCIRG1	Q13488	830 aa		28.05	■■■□□ 2.08
RAB43-208	ENST00000615093	RTKN2	Q8IZC4	609 aa		28.05	■■■□□ 2.08
RAB43-208	ENST00000615093	RNF123	Q5XPI4	1314 aa		28.04	■■■□□ 2.08
RAB43-208	ENST00000615093	VEGFA	P15692	232 aa	Predicted RBP	28.04	■■■□□ 2.08
RAB43-208	ENST00000615093	SLC10A5	Q5PT55	438 aa		28.04	■■■□□ 2.08
RAB43-208	ENST00000615093	NLRP10	Q86W26	655 aa		28.04	■■■□□ 2.08
RAB43-208	ENST00000615093	SNED1	Q8TER0	1413 aa		28.03	■■■□□ 2.08
RAB43-208	ENST00000615093	FSTL1	Q12841	308 aa		28.03	■■■□□ 2.08
RAB43-208	ENST00000615093	C3orf67	Q6ZVT6	689 aa		28.03	■■■□□ 2.08
RAB43-208	ENST00000615093	RBM17	Q96I25	401 aa	Known RBP	28.02	■■■□□ 2.08
RAB43-208	ENST00000615093	NLRP3	Q96P20	1036 aa		28.02	■■■□□ 2.08
RAB43-208	ENST00000615093	CRAMP1	Q96RY5	1269 aa		28.02	■■■□□ 2.08
RAB43-208	ENST00000615093	HYPK	Q9NX55	129 aa		28.02	■■■□□ 2.08
RAB43-208	ENST00000615093	POTEC	B2RU33	542 aa		28.01	■■■□□ 2.07
RAB43-208	ENST00000615093	PLBD2	Q8NHP8	589 aa		28.01	■■■□□ 2.07
RAB43-208	ENST00000615093	LAMB2	P55268	1798 aa		28.01	■■■□□ 2.07
RAB43-208	ENST00000615093	ANP32C	O43423	234 aa		28	■■■□□ 2.07
RAB43-208	ENST00000615093	APLP1	P51693	650 aa		28	■■■□□ 2.07
RAB43-208	ENST00000615093	CC2D2B	Q6DHV5	1058 aa		28	■■■□□ 2.07
RAB43-208	ENST00000615093	ANKRD13D	Q6ZTN6	518 aa		28	■■■□□ 2.07
RAB43-208	ENST00000615093	ZNF277	Q9NRM2	450 aa	Predicted RBP	28	■■■□□ 2.07
RAB43-208	ENST00000615093	SYNE4	Q8N205	404 aa		27.98	■■■□□ 2.07
RAB43-208	ENST00000615093	PSMD1	Q99460	953 aa		27.98	■■■□□ 2.07
RAB43-208	ENST00000615093	MRS2	Q9HD23	443 aa		27.98	■■■□□ 2.07
RAB43-208	ENST00000615093	TRMT112	Q9UI30	125 aa	Known RBP	27.98	■■■□□ 2.07
RAB43-208	ENST00000615093	CCDC27	Q2M243	656 aa		27.97	■■■□□ 2.07
RAB43-208	ENST00000615093	SMC1B	Q8NDV3	1235 aa		27.97	■■■□□ 2.07
RAB43-208	ENST00000615093	ELL2	O00472	640 aa	Predicted RBP	27.96	■■■□□ 2.07
RAB43-208	ENST00000615093	PPEF1	O14829	653 aa	Predicted RBP	27.96	■■■□□ 2.07
RAB43-208	ENST00000615093	DDN	O94850	711 aa	Predicted RBP	27.96	■■■□□ 2.07
RAB43-208	ENST00000615093	C8orf58	Q8NAV2	365 aa		27.96	■■■□□ 2.07
RAB43-208	ENST00000615093	ISCA1	Q9BUE6	129 aa		27.96	■■■□□ 2.07
RAB43-208	ENST00000615093	SH3TC1	Q8TE82	1336 aa		27.95	■■■□□ 2.07
RAB43-208	ENST00000615093	IARS	P41252	1262 aa	Known RBP	27.95	■■■□□ 2.06
RAB43-208	ENST00000615093	HCLS1	P14317	486 aa	Predicted RBP	27.94	■■■□□ 2.06
RAB43-208	ENST00000615093	GRIPAP1	Q4V328	841 aa		27.94	■■■□□ 2.06
RAB43-208	ENST00000615093	ABCC4	O15439	1325 aa		27.92	■■■□□ 2.06
RAB43-208	ENST00000615093	DDX60	Q8IY21	1712 aa	Known RBP	27.92	■■■□□ 2.06
RAB43-208	ENST00000615093	NCBP3	Q53F19	620 aa	Known RBP	27.92	■■■□□ 2.06
RAB43-208	ENST00000615093	SLC51A	Q86UW1	340 aa		27.92	■■■□□ 2.06
RAB43-208	ENST00000615093	WWC1	Q8IX03	1113 aa		27.92	■■■□□ 2.06
RAB43-208	ENST00000615093	PHAX	Q9H814	394 aa	Known RBP	27.92	■■■□□ 2.06
RAB43-208	ENST00000615093	ATP5J2-PTCD1	G3V325	749 aa		27.91	■■■□□ 2.06
RAB43-208	ENST00000615093	TCERG1	O14776	1098 aa	Known RBP	27.91	■■■□□ 2.06
RAB43-208	ENST00000615093	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.91	■■■□□ 2.06
RAB43-208	ENST00000615093	ZNF541	Q9H0D2	1346 aa		27.91	■■■□□ 2.06
RAB43-208	ENST00000615093	SCN4A	P35499	1836 aa		27.9	■■■□□ 2.06
RAB43-208	ENST00000615093	FZD9	O00144	591 aa		27.9	■■■□□ 2.06
RAB43-208	ENST00000615093	TRIM28	Q13263	835 aa	Known RBP	27.9	■■■□□ 2.06
RAB43-208	ENST00000615093	ZNF428	Q96B54	188 aa		27.9	■■■□□ 2.06
RAB43-208	ENST00000615093	CHMP4A	Q9BY43	222 aa		27.9	■■■□□ 2.06
RAB43-208	ENST00000615093	ATP6V0A2	Q9Y487	856 aa		27.9	■■■□□ 2.06
RAB43-208	ENST00000615093	GOLGA2	Q08379	1002 aa		27.89	■■■□□ 2.06
RAB43-208	ENST00000615093	TSPYL6	Q8N831	410 aa		27.89	■■■□□ 2.06
RAB43-208	ENST00000615093	TSR2	Q969E8	191 aa	Known RBP	27.89	■■■□□ 2.06
RAB43-208	ENST00000615093	COL4A5	P29400	1685 aa		27.88	■■■□□ 2.05
RAB43-208	ENST00000615093	CCDC30	Q5VVM6	783 aa		27.88	■■■□□ 2.05
RAB43-208	ENST00000615093	RIC3	Q7Z5B4	369 aa		27.88	■■■□□ 2.05
RAB43-208	ENST00000615093	DNAJC5G	Q8N7S2	189 aa		27.88	■■■□□ 2.05
RAB43-208	ENST00000615093	IL16	Q14005	1332 aa		27.88	■■■□□ 2.05
RAB43-208	ENST00000615093	BBOX1	O75936	387 aa		27.87	■■■□□ 2.05
RAB43-208	ENST00000615093	DDX46	Q7L014	1031 aa	Known RBP	27.87	■■■□□ 2.05
RAB43-208	ENST00000615093	JDP2	Q8WYK2	163 aa		27.87	■■■□□ 2.05
RAB43-208	ENST00000615093	FAM89A	Q96GI7	184 aa		27.87	■■■□□ 2.05
RAB43-208	ENST00000615093	TAF1	P21675	1872 aa		27.87	■■■□□ 2.05
RAB43-208	ENST00000615093	IQCA1L	A6NCM1	817 aa		27.86	■■■□□ 2.05
RAB43-208	ENST00000615093	TMX4	Q9H1E5	349 aa	Predicted RBP	27.86	■■■□□ 2.05
RAB43-208	ENST00000615093	GRAP	Q13588	217 aa		27.85	■■■□□ 2.05
RAB43-208	ENST00000615093	SP8	Q8IXZ3	490 aa		27.85	■■■□□ 2.05
RAB43-208	ENST00000615093	GRAPL	Q8TC17	118 aa	Predicted RBP	27.85	■■■□□ 2.05
RAB43-208	ENST00000615093	HTRA3	P83110	453 aa		27.84	■■■□□ 2.05
RAB43-208	ENST00000615093	LARGE2	Q8N3Y3	721 aa		27.83	■■■□□ 2.05
RAB43-208	ENST00000615093	POTEI	P0CG38	1075 aa		27.82	■■■□□ 2.04
RAB43-208	ENST00000615093	POTEJ	P0CG39	1038 aa		27.82	■■■□□ 2.04
RAB43-208	ENST00000615093	SF3B3	Q15393	1217 aa	Known RBP	27.82	■■■□□ 2.04
RAB43-208	ENST00000615093	GPC2	Q8N158	579 aa		27.82	■■■□□ 2.04
RAB43-208	ENST00000615093	MYD88	Q99836	296 aa		27.82	■■■□□ 2.04
RAB43-208	ENST00000615093	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.82	■■■□□ 2.04
RAB43-208	ENST00000615093	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.82	■■■□□ 2.04
RAB43-208	ENST00000615093	DDX58	O95786	925 aa	Known RBP	27.81	■■■□□ 2.04
RAB43-208	ENST00000615093	EIF6	P56537	245 aa	Known RBP	27.81	■■■□□ 2.04
RAB43-208	ENST00000615093	RTL5	Q5HYW3	569 aa	Predicted RBP	27.81	■■■□□ 2.04
RAB43-208	ENST00000615093	CHADL	Q6NUI6	762 aa		27.81	■■■□□ 2.04
RAB43-208	ENST00000615093	VPS33B	Q9H267	617 aa		27.81	■■■□□ 2.04
RAB43-208	ENST00000615093	LRRC37A	A6NMS7	1700 aa		27.81	■■■□□ 2.04
RAB43-208	ENST00000615093	IRS4	O14654	1257 aa	Predicted RBP	27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms