RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 TTLL7Q6ZT98 887 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 IP6K1Q92551 441 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 C8orf76Q96K31 380 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 UBA5Q9GZZ9 404 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 TSPY2A6NKD2 308 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 ZBTB7BO15156 539 aaPredicted RBP4.46□□□□□ -1.7
LTN1-207ENST00000614971 CYP7A1P22680 504 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 PAXIP1Q6ZW49 1069 aaPredicted RBP4.46□□□□□ -1.7
LTN1-207ENST00000614971 PLEKHM2Q8IWE5 1019 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 SLC26A6Q9BXS9 759 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 SLC5A1P13866 664 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 TTLL12Q14166 644 aaPredicted RBP4.46□□□□□ -1.7
LTN1-207ENST00000614971 TMEM67Q5HYA8 995 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 CNPY2Q9Y2B0 182 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 TEX14Q8IWB6 1497 aa4.46□□□□□ -1.7
LTN1-207ENST00000614971 OTUD7BQ6GQQ9 843 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 VSIG10Q8N0Z9 540 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 MYL10Q9BUA6 226 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 NCOA5Q9HCD5 579 aaKnown RBP4.45□□□□□ -1.7
LTN1-207ENST00000614971 SLC12A7Q9Y666 1083 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 PLIN2Q99541 437 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 NUP62CLQ9H1M0 184 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 TRMT1Q9NXH9 659 aaKnown RBP4.45□□□□□ -1.7
LTN1-207ENST00000614971 AKAP2Q9Y2D5 859 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 KLF18A0A0U1RQI7 1052 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 SNAP23O00161 211 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 ERCC3P19447 782 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 MCM2P49736 904 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 SOGA3Q5TF21 947 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 ANKRD20A12PQ8NF67 263 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 LIMCH1Q9UPQ0 1083 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 ATP7AQ04656 1500 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 APOBRQ0VD83 1088 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 ZNF444Q8N0Y2 327 aaPredicted RBP4.45□□□□□ -1.7
LTN1-207ENST00000614971 CNKSR2Q8WXI2 1034 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 ORC3Q9UBD5 711 aaPredicted RBP4.45□□□□□ -1.7
LTN1-207ENST00000614971 CFAP43Q8NDM7 1665 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 GOLGA8AA7E2F4 631 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 ZNF76P36508 570 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 ATP8B2P98198 1209 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 MAGEB6Q8N7X4 407 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 ERCC4Q92889 916 aaPredicted RBP4.45□□□□□ -1.7
LTN1-207ENST00000614971 EVI5LQ96CN4 794 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 SUCLG2Q96I99 432 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 NEK1Q96PY6 1258 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 SEC62Q99442 399 aaKnown RBP4.45□□□□□ -1.7
LTN1-207ENST00000614971 ESYT1Q9BSJ8 1104 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 SAP30BPQ9UHR5 308 aaKnown RBP4.45□□□□□ -1.7
LTN1-207ENST00000614971 CTNNA3Q9UI47 895 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 ASAP1Q9ULH1 1129 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 TBX22Q9Y458 520 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 MBD3O95983 291 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 TPM2P07951 284 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 DNM1Q05193 864 aaKnown RBP4.45□□□□□ -1.7
LTN1-207ENST00000614971 PRKG1Q13976 671 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 LINS1Q8NG48 757 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 HOOK1Q9UJC3 728 aaKnown RBP4.45□□□□□ -1.7
LTN1-207ENST00000614971 TCOF1Q13428 1488 aaKnown RBP4.45□□□□□ -1.7
LTN1-207ENST00000614971 TTC21AQ8NDW8 1320 aa4.45□□□□□ -1.7
LTN1-207ENST00000614971 MAP3K5Q99683 1374 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 CCDC192P0DO97 292 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 Q6ZUG5 572 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 CCDC47Q96A33 483 aaKnown RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 SLC4A4Q9Y6R1 1079 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 DNMT1P26358 1616 aaKnown RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 MAGI2Q86UL8 1455 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 BAG4O95429 457 aaKnown RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 ANKRD1Q15327 319 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 CFAP100Q494V2 611 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 CT47A1Q5JQC4 288 aaPredicted RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 ZNF396Q96N95 335 aaPredicted RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 SEPT11Q9NVA2 429 aaKnown RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.44□□□□□ -1.7
LTN1-207ENST00000614971 PRR36Q9H6K5 1346 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 POLR3AO14802 1390 aaPredicted RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 PTPRTO14522 1441 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 STX6O43752 255 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 SPTY2D1Q68D10 685 aaPredicted RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 ZSCAN25Q6NSZ9 544 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 ANKRD18AQ8IVF6 992 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 CMTR1Q8N1G2 835 aaKnown RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 FNBP4Q8N3X1 1017 aaPredicted RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 NLRP3Q96P20 1036 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 VEZTQ9HBM0 779 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 ZNF335Q9H4Z2 1342 aaPredicted RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 ZYXQ15942 572 aaKnown RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 SLFNL1Q499Z3 407 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 A0A1B0GUL7 405 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 IDEP14735 1019 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 PAG1Q9NWQ8 432 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 ABCA5Q8WWZ7 1642 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 AK2P54819 239 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 IQCA1Q86XH1 822 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 FSIP1Q8NA03 581 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 FEZ1Q99689 392 aa4.44□□□□□ -1.7
LTN1-207ENST00000614971 COL17A1Q9UMD9 1497 aaPredicted RBP4.44□□□□□ -1.7
LTN1-207ENST00000614971 ITGA6P23229 1130 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 AFMP43652 599 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 NLRP5P59047 1200 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 SP4Q02446 784 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms