RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 IQCEQ6IPM2 695 aa17.12■□□□□ 0.33
SNPH-203ENST00000614659 NUP133Q8WUM0 1156 aa17.12■□□□□ 0.33
SNPH-203ENST00000614659 TFCP2L1Q9NZI6 479 aa17.12■□□□□ 0.33
SNPH-203ENST00000614659 KDM5DQ9BY66 1539 aa17.12■□□□□ 0.33
SNPH-203ENST00000614659 SYNMO15061 1565 aa17.12■□□□□ 0.33
SNPH-203ENST00000614659 GJB2P29033 226 aa17.12■□□□□ 0.33
SNPH-203ENST00000614659 C8orf76Q96K31 380 aa17.12■□□□□ 0.33
SNPH-203ENST00000614659 KRT18P05783 430 aaKnown RBP17.12■□□□□ 0.33
SNPH-203ENST00000614659 EHMT1Q9H9B1 1298 aa17.12■□□□□ 0.33
SNPH-203ENST00000614659 C8orf58Q8NAV2 365 aa17.12■□□□□ 0.33
SNPH-203ENST00000614659 LRSAM1Q6UWE0 723 aa17.11■□□□□ 0.33
SNPH-203ENST00000614659 TMX3Q96JJ7 454 aa17.11■□□□□ 0.33
SNPH-203ENST00000614659 CCDC85AQ96PX6 553 aaPredicted RBP17.11■□□□□ 0.33
SNPH-203ENST00000614659 MEIS3Q99687 375 aa17.11■□□□□ 0.33
SNPH-203ENST00000614659 CCDC191Q8NCU4 936 aa17.11■□□□□ 0.33
SNPH-203ENST00000614659 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
SNPH-203ENST00000614659 TPTE2Q6XPS3 522 aa17.11■□□□□ 0.33
SNPH-203ENST00000614659 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
SNPH-203ENST00000614659 CCDC8Q9H0W5 538 aaPredicted RBP17.11■□□□□ 0.33
SNPH-203ENST00000614659 MKNK2Q9HBH9 465 aa17.11■□□□□ 0.33
SNPH-203ENST00000614659 ZSCAN12O43309 604 aa17.11■□□□□ 0.33
SNPH-203ENST00000614659 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 HLA-DOAP06340 250 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 ZSCAN22P10073 491 aaPredicted RBP17.1■□□□□ 0.33
SNPH-203ENST00000614659 GSDMDP57764 484 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 ANKRD13DQ6ZTN6 518 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 MAP3K5Q99683 1374 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 GPTP24298 496 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 ANKRD18AQ8IVF6 992 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 CEP85Q6P2H3 762 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
SNPH-203ENST00000614659 ACSBG1Q96GR2 724 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 PTPRTO14522 1441 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 EIF3JO75822 258 aaKnown RBP17.1■□□□□ 0.33
SNPH-203ENST00000614659 RAB3GAP1Q15042 981 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 STX1AQ16623 288 aa17.1■□□□□ 0.33
SNPH-203ENST00000614659 ZNF213O14771 459 aa17.09■□□□□ 0.33
SNPH-203ENST00000614659 ZSCAN23Q3MJ62 389 aa17.09■□□□□ 0.33
SNPH-203ENST00000614659 C16orf71Q8IYS4 520 aaPredicted RBP17.09■□□□□ 0.33
SNPH-203ENST00000614659 MPHOSPH6Q99547 160 aaKnown RBP17.09■□□□□ 0.33
SNPH-203ENST00000614659 EYA3Q99504 573 aa17.09■□□□□ 0.33
SNPH-203ENST00000614659 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
SNPH-203ENST00000614659 RLBP1P12271 317 aa17.09■□□□□ 0.33
SNPH-203ENST00000614659 UTP14AQ9BVJ6 771 aaKnown RBP17.09■□□□□ 0.33
SNPH-203ENST00000614659 KDM4AO75164 1064 aa17.09■□□□□ 0.33
SNPH-203ENST00000614659 BAG6P46379 1132 aa17.09■□□□□ 0.33
SNPH-203ENST00000614659 INTS4Q96HW7 963 aaKnown RBP17.09■□□□□ 0.33
SNPH-203ENST00000614659 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
SNPH-203ENST00000614659 SFPQP23246 707 aaKnown RBP eCLIP17.08■□□□□ 0.33
SNPH-203ENST00000614659 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.33
SNPH-203ENST00000614659 TAF3Q5VWG9 929 aa17.08■□□□□ 0.33
SNPH-203ENST00000614659 LDHAL6AQ6ZMR3 332 aa17.08■□□□□ 0.33
SNPH-203ENST00000614659 ZNF444Q8N0Y2 327 aaPredicted RBP17.08■□□□□ 0.33
SNPH-203ENST00000614659 PYM1Q9BRP8 204 aaKnown RBP17.08■□□□□ 0.33
SNPH-203ENST00000614659 CABP5Q9NP86 173 aa17.08■□□□□ 0.33
SNPH-203ENST00000614659 AOX1Q06278 1338 aa17.08■□□□□ 0.33
SNPH-203ENST00000614659 RAD50Q92878 1312 aa17.08■□□□□ 0.33
SNPH-203ENST00000614659 ZFYP08048 801 aaPredicted RBP17.08■□□□□ 0.33
SNPH-203ENST00000614659 NF2P35240 595 aa17.08■□□□□ 0.32
SNPH-203ENST00000614659 ZNF76P36508 570 aa17.08■□□□□ 0.32
SNPH-203ENST00000614659 FERMT3Q86UX7 667 aa17.08■□□□□ 0.32
SNPH-203ENST00000614659 DNAI2Q9GZS0 605 aa17.08■□□□□ 0.32
SNPH-203ENST00000614659 NAPBQ9H115 298 aa17.08■□□□□ 0.32
SNPH-203ENST00000614659 MBD5Q9P267 1494 aa17.08■□□□□ 0.32
SNPH-203ENST00000614659 MYOM2P54296 1465 aa17.08■□□□□ 0.32
SNPH-203ENST00000614659 TRAF1Q13077 416 aa17.07■□□□□ 0.32
SNPH-203ENST00000614659 KSR2Q6VAB6 950 aa17.07■□□□□ 0.32
SNPH-203ENST00000614659 RBM25P49756 843 aaKnown RBP17.07■□□□□ 0.32
SNPH-203ENST00000614659 BMP2KQ9NSY1 1161 aaPredicted RBP17.07■□□□□ 0.32
SNPH-203ENST00000614659 BRPF1P55201 1214 aaPredicted RBP17.06■□□□□ 0.32
SNPH-203ENST00000614659 CAMK4Q16566 473 aa17.06■□□□□ 0.32
SNPH-203ENST00000614659 HS1BP3Q53T59 392 aa17.06■□□□□ 0.32
SNPH-203ENST00000614659 NLRP1Q9C000 1473 aa17.06■□□□□ 0.32
SNPH-203ENST00000614659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNPH-203ENST00000614659 CCDC178Q5BJE1 867 aa17.06■□□□□ 0.32
SNPH-203ENST00000614659 CT47A1Q5JQC4 288 aaPredicted RBP17.06■□□□□ 0.32
SNPH-203ENST00000614659 TRAPPC3LQ5T215 181 aa17.06■□□□□ 0.32
SNPH-203ENST00000614659 USP21Q9UK80 565 aa17.06■□□□□ 0.32
SNPH-203ENST00000614659 SSRP1Q08945 709 aaKnown RBP17.06■□□□□ 0.32
SNPH-203ENST00000614659 PTPN14Q15678 1187 aa17.06■□□□□ 0.32
SNPH-203ENST00000614659 IQCA1Q86XH1 822 aa17.06■□□□□ 0.32
SNPH-203ENST00000614659 OGFOD1Q8N543 542 aa17.06■□□□□ 0.32
SNPH-203ENST00000614659 NPHP4O75161 1426 aaPredicted RBP17.06■□□□□ 0.32
SNPH-203ENST00000614659 CABLES1Q8TDN4 633 aa17.06■□□□□ 0.32
SNPH-203ENST00000614659 TTC37Q6PGP7 1564 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 MLH3Q9UHC1 1453 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 ODF2Q5BJF6 829 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 ZNF804AQ7Z570 1209 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 CUL5Q93034 780 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 CLIP2Q9UDT6 1046 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 SLC12A7Q9Y666 1083 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 SBNO1A3KN83 1393 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
SNPH-203ENST00000614659 HOXC9P31274 260 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 FILIP1Q7Z7B0 1213 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 GBP3Q9H0R5 595 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 HOXB7P09629 217 aa17.05■□□□□ 0.32
SNPH-203ENST00000614659 TRIM21P19474 475 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms