RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 NUCB1Q02818 461 aa15.73■□□□□ 0.11
CHD1-212ENST00000614616 SETDB1Q15047 1291 aa15.73■□□□□ 0.11
CHD1-212ENST00000614616 CEP120Q8N960 986 aa15.73■□□□□ 0.11
CHD1-212ENST00000614616 POLR1AO95602 1720 aaPredicted RBP15.72■□□□□ 0.11
CHD1-212ENST00000614616 CCDC158Q5M9N0 1113 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 KIF1CO43896 1103 aaKnown RBP15.72■□□□□ 0.11
CHD1-212ENST00000614616 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 TTC39AQ5SRH9 613 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 KRT86O43790 486 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 GLRX3O76003 335 aaKnown RBP15.72■□□□□ 0.11
CHD1-212ENST00000614616 CTNNBL1Q8WYA6 563 aaPredicted RBP15.72■□□□□ 0.11
CHD1-212ENST00000614616 TMX3Q96JJ7 454 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 SMC6Q96SB8 1091 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 IMPACTQ9P2X3 320 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 MXRA7P84157 204 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 ZBTB17Q13105 803 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 EFCAB13Q8IY85 973 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 RHOXF2BP0C7M4 288 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 DNA2P51530 1060 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 CHMP4BP1P59074 171 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 AACSQ86V21 672 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 RHOXF2Q9BQY4 288 aa15.72■□□□□ 0.11
CHD1-212ENST00000614616 CTDP1Q9Y5B0 961 aaPredicted RBP15.72■□□□□ 0.11
CHD1-212ENST00000614616 BIN1O00499 593 aa15.71■□□□□ 0.11
CHD1-212ENST00000614616 ITSN2Q9NZM3 1697 aa15.71■□□□□ 0.11
CHD1-212ENST00000614616 ANAPC15P60006 121 aa15.71■□□□□ 0.11
CHD1-212ENST00000614616 KRT83P78385 493 aa15.71■□□□□ 0.11
CHD1-212ENST00000614616 HDAC1Q13547 482 aaPredicted RBP15.71■□□□□ 0.11
CHD1-212ENST00000614616 LARP1Q6PKG0 1096 aaKnown RBP15.71■□□□□ 0.11
CHD1-212ENST00000614616 TRIM21P19474 475 aaKnown RBP15.71■□□□□ 0.11
CHD1-212ENST00000614616 TDRD12Q587J7 1177 aaKnown RBP15.71■□□□□ 0.11
CHD1-212ENST00000614616 RBSNQ9H1K0 784 aa15.71■□□□□ 0.11
CHD1-212ENST00000614616 CWC25Q9NXE8 425 aaPredicted RBP15.71■□□□□ 0.11
CHD1-212ENST00000614616 ELP1O95163 1332 aa15.71■□□□□ 0.11
CHD1-212ENST00000614616 NACAP1Q9BZK3 213 aa15.71■□□□□ 0.11
CHD1-212ENST00000614616 KIAA0753Q2KHM9 967 aa15.71■□□□□ 0.11
CHD1-212ENST00000614616 ANKRD50Q9ULJ7 1429 aa15.71■□□□□ 0.1
CHD1-212ENST00000614616 PPP1R9BQ96SB3 815 aa15.7■□□□□ 0.1
CHD1-212ENST00000614616 SRGAP3O43295 1099 aa15.7■□□□□ 0.1
CHD1-212ENST00000614616 AOPEPQ8N6M6 819 aa15.7■□□□□ 0.1
CHD1-212ENST00000614616 KIF1BPQ96EK5 621 aa15.7■□□□□ 0.1
CHD1-212ENST00000614616 DUSP27Q5VZP5 1158 aa15.7■□□□□ 0.1
CHD1-212ENST00000614616 SREK1Q8WXA9 508 aaKnown RBP15.7■□□□□ 0.1
CHD1-212ENST00000614616 EIF2AK4Q9P2K8 1649 aaKnown RBP15.7■□□□□ 0.1
CHD1-212ENST00000614616 IGHDP01880 384 aa15.7■□□□□ 0.1
CHD1-212ENST00000614616 VCX3BQ9H321 246 aa15.7■□□□□ 0.1
CHD1-212ENST00000614616 ZHX3Q9H4I2 956 aa15.7■□□□□ 0.1
CHD1-212ENST00000614616 VEZTQ9HBM0 779 aa15.7■□□□□ 0.1
CHD1-212ENST00000614616 MAP7Q14244 749 aa15.7■□□□□ 0.1
CHD1-212ENST00000614616 RNF10Q8N5U6 811 aaKnown RBP15.7■□□□□ 0.1
CHD1-212ENST00000614616 GPR161Q8N6U8 529 aaKnown RBP15.7■□□□□ 0.1
CHD1-212ENST00000614616 VIRMAQ69YN4 1812 aaKnown RBP15.7■□□□□ 0.1
CHD1-212ENST00000614616 ZBTB16Q05516 673 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 KCNG4Q8TDN1 519 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
CHD1-212ENST00000614616 PUF60Q9UHX1 559 aaKnown RBP15.69■□□□□ 0.1
CHD1-212ENST00000614616 IKBKGQ9Y6K9 419 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 TRIM4Q9C037 500 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 ABCC11Q96J66 1382 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHD1-212ENST00000614616 MICAL1Q8TDZ2 1067 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 UBAC1Q9BSL1 405 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 GAS2L2Q8NHY3 880 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 SELENOSQ9BQE4 189 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 TTC22Q5TAA0 569 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 RAB3IPQ96QF0 476 aaPredicted RBP15.69■□□□□ 0.1
CHD1-212ENST00000614616 DNAJC25Q9H1X3 360 aa15.69■□□□□ 0.1
CHD1-212ENST00000614616 CTTNBP2Q8WZ74 1663 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 ATP5DP30049 168 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 PRKAR2BP31323 418 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 NOP2P46087 812 aaKnown RBP15.68■□□□□ 0.1
CHD1-212ENST00000614616 PPFIA1Q13136 1202 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 CCDC102BQ68D86 513 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 PRPF40BQ6NWY9 871 aaKnown RBP15.68■□□□□ 0.1
CHD1-212ENST00000614616 CCDC174Q6PII3 467 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 PHLDB2Q86SQ0 1253 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 RABGAP1Q9Y3P9 1069 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.68■□□□□ 0.13e-7■□□□□ 9.9
CHD1-212ENST00000614616 SYKP43405 635 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 PCF11O94913 1555 aaKnown RBP15.68■□□□□ 0.1
CHD1-212ENST00000614616 ZKSCAN8Q15776 578 aaPredicted RBP15.68■□□□□ 0.1
CHD1-212ENST00000614616 CEP85LQ5SZL2 805 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 INTS8Q75QN2 995 aaKnown RBP15.68■□□□□ 0.1
CHD1-212ENST00000614616 INTS4Q96HW7 963 aaKnown RBP15.68■□□□□ 0.1
CHD1-212ENST00000614616 DDX23Q9BUQ8 820 aaKnown RBP15.68■□□□□ 0.1
CHD1-212ENST00000614616 PLVAPQ9BX97 442 aa15.68■□□□□ 0.1
CHD1-212ENST00000614616 TFIP11Q9UBB9 837 aaKnown RBP15.68■□□□□ 0.1
CHD1-212ENST00000614616 KIF5AQ12840 1032 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 HOMER2Q9NSB8 354 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 RAD50Q92878 1312 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 ANKRD30BQ9BXX2 1392 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 GBP5Q96PP8 586 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 PPP1R12CQ9BZL4 782 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 PRPF4BQ13523 1007 aaKnown RBP15.67■□□□□ 0.1
CHD1-212ENST00000614616 CAPN7Q9Y6W3 813 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 GOLGA6BA6NDN3 693 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 CIB2O75838 187 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 USH1CQ9Y6N9 552 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 MTIF2P46199 727 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms