RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 COPS6Q7L5N1 327 aa23.04■■□□□ 1.28
TNFAIP3-207ENST00000614035 NECTIN2Q92692 538 aa23.04■■□□□ 1.28
TNFAIP3-207ENST00000614035 RPGRQ92834 1020 aaKnown RBP23.04■■□□□ 1.28
TNFAIP3-207ENST00000614035 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
TNFAIP3-207ENST00000614035 CFAP44Q96MT7 982 aa23.03■■□□□ 1.28
TNFAIP3-207ENST00000614035 RNF123Q5XPI4 1314 aa23.02■■□□□ 1.28
TNFAIP3-207ENST00000614035 DDNO94850 711 aaPredicted RBP23.02■■□□□ 1.28
TNFAIP3-207ENST00000614035 HSP90AB3PQ58FF7 597 aa23.02■■□□□ 1.28
TNFAIP3-207ENST00000614035 CC2D2BQ6DHV5 1058 aa23.02■■□□□ 1.28
TNFAIP3-207ENST00000614035 XAGE3Q8WTP9 111 aa23.02■■□□□ 1.28
TNFAIP3-207ENST00000614035 ZNF277Q9NRM2 450 aaPredicted RBP23.02■■□□□ 1.28
TNFAIP3-207ENST00000614035 CRAMP1Q96RY5 1269 aa23.01■■□□□ 1.27
TNFAIP3-207ENST00000614035 UTP14AQ9BVJ6 771 aaKnown RBP23.01■■□□□ 1.27
TNFAIP3-207ENST00000614035 AIMP1Q12904 312 aaKnown RBP23■■□□□ 1.27
TNFAIP3-207ENST00000614035 SLC10A5Q5PT55 438 aa23■■□□□ 1.27
TNFAIP3-207ENST00000614035 PSMD1Q99460 953 aa23■■□□□ 1.27
TNFAIP3-207ENST00000614035 CHPF2Q9P2E5 772 aa23■■□□□ 1.27
TNFAIP3-207ENST00000614035 HDGFL1Q5TGJ6 251 aa22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 C3orf67Q6ZVT6 689 aa22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 SYNE4Q8N205 404 aa22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 RBM17Q96I25 401 aaKnown RBP22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 L3MBTL3Q96JM7 780 aaPredicted RBP22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 APAF1O14727 1248 aa22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 ZNF853P0CG23 659 aa22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 IARSP41252 1262 aaKnown RBP22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 TCIRG1Q13488 830 aa22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 GRIPAP1Q4V328 841 aa22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 NLRP10Q86W26 655 aa22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 NLRP3Q96P20 1036 aa22.99■■□□□ 1.27
TNFAIP3-207ENST00000614035 HTRA3P83110 453 aa22.98■■□□□ 1.27
TNFAIP3-207ENST00000614035 MBIPQ9NS73 344 aa22.98■■□□□ 1.27
TNFAIP3-207ENST00000614035 DBF4Q9UBU7 674 aaPredicted RBP22.98■■□□□ 1.27
TNFAIP3-207ENST00000614035 SCN4AP35499 1836 aa22.97■■□□□ 1.27
TNFAIP3-207ENST00000614035 ZNF541Q9H0D2 1346 aa22.96■■□□□ 1.27
TNFAIP3-207ENST00000614035 IQCA1LA6NCM1 817 aa22.96■■□□□ 1.27
TNFAIP3-207ENST00000614035 FZD9O00144 591 aa22.96■■□□□ 1.27
TNFAIP3-207ENST00000614035 PPEF1O14829 653 aaPredicted RBP22.96■■□□□ 1.27
TNFAIP3-207ENST00000614035 CALD1Q05682 793 aaKnown RBP22.96■■□□□ 1.27
TNFAIP3-207ENST00000614035 DUSP27Q5VZP5 1158 aa22.96■■□□□ 1.27
TNFAIP3-207ENST00000614035 KLRG1Q96E93 195 aa22.96■■□□□ 1.27
TNFAIP3-207ENST00000614035 IFT57Q9NWB7 429 aa22.96■■□□□ 1.27
TNFAIP3-207ENST00000614035 PLBD2Q8NHP8 589 aa22.95■■□□□ 1.26
TNFAIP3-207ENST00000614035 HYPKQ9NX55 129 aa22.94■■□□□ 1.26
TNFAIP3-207ENST00000614035 LAMB2P55268 1798 aa22.94■■□□□ 1.26
TNFAIP3-207ENST00000614035 ANKRD13DQ6ZTN6 518 aa22.93■■□□□ 1.26
TNFAIP3-207ENST00000614035 SH3TC1Q8TE82 1336 aa22.93■■□□□ 1.26
TNFAIP3-207ENST00000614035 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
TNFAIP3-207ENST00000614035 GNAI1P63096 354 aa22.92■■□□□ 1.26
TNFAIP3-207ENST00000614035 CHADLQ6NUI6 762 aa22.92■■□□□ 1.26
TNFAIP3-207ENST00000614035 JDP2Q8WYK2 163 aa22.92■■□□□ 1.26
TNFAIP3-207ENST00000614035 TAF1DQ9H5J8 278 aaPredicted RBP22.92■■□□□ 1.26
TNFAIP3-207ENST00000614035 TRMT112Q9UI30 125 aaKnown RBP22.92■■□□□ 1.26
TNFAIP3-207ENST00000614035 ABCC4O15439 1325 aa22.92■■□□□ 1.26
TNFAIP3-207ENST00000614035 COL4A5P29400 1685 aa22.92■■□□□ 1.26
TNFAIP3-207ENST00000614035 JMYQ8N9B5 988 aa22.91■■□□□ 1.26
TNFAIP3-207ENST00000614035 ATP6V0A2Q9Y487 856 aa22.91■■□□□ 1.26
TNFAIP3-207ENST00000614035 POTEIP0CG38 1075 aa22.91■■□□□ 1.26
TNFAIP3-207ENST00000614035 POTEJP0CG39 1038 aa22.91■■□□□ 1.26
TNFAIP3-207ENST00000614035 HCLS1P14317 486 aaPredicted RBP22.91■■□□□ 1.26
TNFAIP3-207ENST00000614035 SLC51AQ86UW1 340 aa22.91■■□□□ 1.26
TNFAIP3-207ENST00000614035 GPC2Q8N158 579 aa22.91■■□□□ 1.26
TNFAIP3-207ENST00000614035 ISCA1Q9BUE6 129 aa22.91■■□□□ 1.26
TNFAIP3-207ENST00000614035 LDHDQ86WU2 507 aa22.9■■□□□ 1.26
TNFAIP3-207ENST00000614035 TCERG1O14776 1098 aaKnown RBP22.89■■□□□ 1.25
TNFAIP3-207ENST00000614035 BBOX1O75936 387 aa22.89■■□□□ 1.25
TNFAIP3-207ENST00000614035 CCDC184Q52MB2 194 aa22.89■■□□□ 1.25
TNFAIP3-207ENST00000614035 TMX4Q9H1E5 349 aaPredicted RBP22.89■■□□□ 1.25
TNFAIP3-207ENST00000614035 HACL1Q9UJ83 578 aa22.89■■□□□ 1.25
TNFAIP3-207ENST00000614035 DDX60Q8IY21 1712 aaKnown RBP22.88■■□□□ 1.25
TNFAIP3-207ENST00000614035 TRIM28Q13263 835 aaKnown RBP22.87■■□□□ 1.25
TNFAIP3-207ENST00000614035 LARGE2Q8N3Y3 721 aa22.87■■□□□ 1.25
TNFAIP3-207ENST00000614035 VPS33BQ9H267 617 aa22.87■■□□□ 1.25
TNFAIP3-207ENST00000614035 ADAMTSL1Q8N6G6 1762 aa22.87■■□□□ 1.25
TNFAIP3-207ENST00000614035 EPHX2P34913 555 aa22.86■■□□□ 1.25
TNFAIP3-207ENST00000614035 EIF6P56537 245 aaKnown RBP22.86■■□□□ 1.25
TNFAIP3-207ENST00000614035 DDX46Q7L014 1031 aaKnown RBP22.86■■□□□ 1.25
TNFAIP3-207ENST00000614035 RTFDC1Q9BY42 306 aaPredicted RBP22.86■■□□□ 1.25
TNFAIP3-207ENST00000614035 ATP5J2-PTCD1G3V325 749 aa22.85■■□□□ 1.25
TNFAIP3-207ENST00000614035 GRAPQ13588 217 aa22.85■■□□□ 1.25
TNFAIP3-207ENST00000614035 SP8Q8IXZ3 490 aa22.85■■□□□ 1.25
TNFAIP3-207ENST00000614035 C8orf58Q8NAV2 365 aa22.85■■□□□ 1.25
TNFAIP3-207ENST00000614035 GRAPLQ8TC17 118 aaPredicted RBP22.85■■□□□ 1.25
TNFAIP3-207ENST00000614035 ELL2O00472 640 aaPredicted RBP22.84■■□□□ 1.25
TNFAIP3-207ENST00000614035 CCDC27Q2M243 656 aa22.84■■□□□ 1.25
TNFAIP3-207ENST00000614035 PNMA8AQ86V59 439 aaPredicted RBP22.84■■□□□ 1.25
TNFAIP3-207ENST00000614035 PPIP5K2O43314 1243 aa22.83■■□□□ 1.25
TNFAIP3-207ENST00000614035 GOLGA2Q08379 1002 aa22.83■■□□□ 1.25
TNFAIP3-207ENST00000614035 NIM1KQ8IY84 436 aa22.83■■□□□ 1.25
TNFAIP3-207ENST00000614035 SUPT20HQ8NEM7 779 aa22.83■■□□□ 1.25
TNFAIP3-207ENST00000614035 FAM89AQ96GI7 184 aa22.83■■□□□ 1.25
TNFAIP3-207ENST00000614035 CHMP4AQ9BY43 222 aa22.83■■□□□ 1.25
TNFAIP3-207ENST00000614035 PCNTO95613 3336 aa22.83■■□□□ 1.25
TNFAIP3-207ENST00000614035 LRRC37AA6NMS7 1700 aa22.83■■□□□ 1.25
TNFAIP3-207ENST00000614035 SF3B3Q15393 1217 aaKnown RBP22.82■■□□□ 1.24
TNFAIP3-207ENST00000614035 EAPPQ56P03 285 aaPredicted RBP22.82■■□□□ 1.24
TNFAIP3-207ENST00000614035 TMC4Q7Z404 712 aa22.82■■□□□ 1.24
TNFAIP3-207ENST00000614035 ZNF428Q96B54 188 aa22.82■■□□□ 1.24
TNFAIP3-207ENST00000614035 PHAXQ9H814 394 aaKnown RBP22.82■■□□□ 1.24
TNFAIP3-207ENST00000614035 CREBZFQ9NS37 354 aa22.82■■□□□ 1.24
TNFAIP3-207ENST00000614035 PASKQ96RG2 1323 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms