RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 AIMP1Q12904 312 aaKnown RBP29.56■■■□□ 2.32
FAM228B-208ENST00000613899 RPGRQ92834 1020 aaKnown RBP29.56■■■□□ 2.32
FAM228B-208ENST00000613899 MBIPQ9NS73 344 aa29.56■■■□□ 2.32
FAM228B-208ENST00000613899 IFT57Q9NWB7 429 aa29.56■■■□□ 2.32
FAM228B-208ENST00000613899 CHPF2Q9P2E5 772 aa29.56■■■□□ 2.32
FAM228B-208ENST00000613899 RTKN2Q8IZC4 609 aa29.55■■■□□ 2.32
FAM228B-208ENST00000613899 ZNF853P0CG23 659 aa29.54■■■□□ 2.32
FAM228B-208ENST00000613899 VEGFAP15692 232 aaPredicted RBP29.54■■■□□ 2.32
FAM228B-208ENST00000613899 GNAI1P63096 354 aa29.54■■■□□ 2.32
FAM228B-208ENST00000613899 FKBP4Q02790 459 aaKnown RBP eCLIP29.54■■■□□ 2.32
FAM228B-208ENST00000613899 FSTL1Q12841 308 aa29.54■■■□□ 2.32
FAM228B-208ENST00000613899 UTP14AQ9BVJ6 771 aaKnown RBP29.54■■■□□ 2.32
FAM228B-208ENST00000613899 DBF4Q9UBU7 674 aaPredicted RBP29.54■■■□□ 2.32
FAM228B-208ENST00000613899 ZNF316A6NFI3 1004 aaPredicted RBP29.53■■■□□ 2.32
FAM228B-208ENST00000613899 HOXA10P31260 410 aaPredicted RBP29.53■■■□□ 2.32
FAM228B-208ENST00000613899 DUSP27Q5VZP5 1158 aa29.53■■■□□ 2.32
FAM228B-208ENST00000613899 APLP1P51693 650 aa29.52■■■□□ 2.32
FAM228B-208ENST00000613899 TCIRG1Q13488 830 aa29.5■■■□□ 2.31
FAM228B-208ENST00000613899 CC2D2BQ6DHV5 1058 aa29.5■■■□□ 2.31
FAM228B-208ENST00000613899 RBM17Q96I25 401 aaKnown RBP29.5■■■□□ 2.31
FAM228B-208ENST00000613899 NLRP3Q96P20 1036 aa29.5■■■□□ 2.31
FAM228B-208ENST00000613899 CCDC184Q52MB2 194 aa29.49■■■□□ 2.31
FAM228B-208ENST00000613899 OLFM4Q6UX06 510 aa29.49■■■□□ 2.31
FAM228B-208ENST00000613899 NLRP10Q86W26 655 aa29.49■■■□□ 2.31
FAM228B-208ENST00000613899 SMC1BQ8NDV3 1235 aa29.49■■■□□ 2.31
FAM228B-208ENST00000613899 CRAMP1Q96RY5 1269 aa29.49■■■□□ 2.31
FAM228B-208ENST00000613899 HYPKQ9NX55 129 aa29.49■■■□□ 2.31
FAM228B-208ENST00000613899 SNED1Q8TER0 1413 aa29.48■■■□□ 2.31
FAM228B-208ENST00000613899 PLBD2Q8NHP8 589 aa29.48■■■□□ 2.31
FAM228B-208ENST00000613899 LAMB2P55268 1798 aa29.47■■■□□ 2.31
FAM228B-208ENST00000613899 ANP32CO43423 234 aa29.47■■■□□ 2.31
FAM228B-208ENST00000613899 SLC10A5Q5PT55 438 aa29.47■■■□□ 2.31
FAM228B-208ENST00000613899 ZNF277Q9NRM2 450 aaPredicted RBP29.47■■■□□ 2.31
FAM228B-208ENST00000613899 GRIPAP1Q4V328 841 aa29.46■■■□□ 2.31
FAM228B-208ENST00000613899 ANKRD13DQ6ZTN6 518 aa29.46■■■□□ 2.31
FAM228B-208ENST00000613899 PSMD1Q99460 953 aa29.46■■■□□ 2.31
FAM228B-208ENST00000613899 C3orf67Q6ZVT6 689 aa29.45■■■□□ 2.31
FAM228B-208ENST00000613899 TRMT112Q9UI30 125 aaKnown RBP29.45■■■□□ 2.31
FAM228B-208ENST00000613899 PPEF1O14829 653 aaPredicted RBP29.44■■■□□ 2.3
FAM228B-208ENST00000613899 SH3TC1Q8TE82 1336 aa29.44■■■□□ 2.3
FAM228B-208ENST00000613899 POTECB2RU33 542 aa29.43■■■□□ 2.3
FAM228B-208ENST00000613899 IARSP41252 1262 aaKnown RBP29.43■■■□□ 2.3
FAM228B-208ENST00000613899 SYNE4Q8N205 404 aa29.43■■■□□ 2.3
FAM228B-208ENST00000613899 MRS2Q9HD23 443 aa29.43■■■□□ 2.3
FAM228B-208ENST00000613899 DDNO94850 711 aaPredicted RBP29.42■■■□□ 2.3
FAM228B-208ENST00000613899 CHMP4AQ9BY43 222 aa29.42■■■□□ 2.3
FAM228B-208ENST00000613899 SCN4AP35499 1836 aa29.41■■■□□ 2.3
FAM228B-208ENST00000613899 CCDC27Q2M243 656 aa29.41■■■□□ 2.3
FAM228B-208ENST00000613899 TMX4Q9H1E5 349 aaPredicted RBP29.4■■■□□ 2.3
FAM228B-208ENST00000613899 ABCC4O15439 1325 aa29.4■■■□□ 2.3
FAM228B-208ENST00000613899 IQCA1LA6NCM1 817 aa29.39■■■□□ 2.3
FAM228B-208ENST00000613899 ELL2O00472 640 aaPredicted RBP29.39■■■□□ 2.3
FAM228B-208ENST00000613899 GOLGA2Q08379 1002 aa29.39■■■□□ 2.3
FAM228B-208ENST00000613899 L3MBTL3Q96JM7 780 aaPredicted RBP29.39■■■□□ 2.3
FAM228B-208ENST00000613899 ISCA1Q9BUE6 129 aa29.39■■■□□ 2.3
FAM228B-208ENST00000613899 DDX60Q8IY21 1712 aaKnown RBP29.39■■■□□ 2.3
FAM228B-208ENST00000613899 HCLS1P14317 486 aaPredicted RBP29.38■■■□□ 2.29
FAM228B-208ENST00000613899 JDP2Q8WYK2 163 aa29.38■■■□□ 2.29
FAM228B-208ENST00000613899 C8orf58Q8NAV2 365 aa29.37■■■□□ 2.29
FAM228B-208ENST00000613899 ZNF541Q9H0D2 1346 aa29.37■■■□□ 2.29
FAM228B-208ENST00000613899 FZD9O00144 591 aa29.36■■■□□ 2.29
FAM228B-208ENST00000613899 TCERG1O14776 1098 aaKnown RBP29.36■■■□□ 2.29
FAM228B-208ENST00000613899 NCBP3Q53F19 620 aaKnown RBP29.36■■■□□ 2.29
FAM228B-208ENST00000613899 ATP6V0A2Q9Y487 856 aa29.36■■■□□ 2.29
FAM228B-208ENST00000613899 CCDC30Q5VVM6 783 aa29.35■■■□□ 2.29
FAM228B-208ENST00000613899 DDX46Q7L014 1031 aaKnown RBP29.35■■■□□ 2.29
FAM228B-208ENST00000613899 RIC3Q7Z5B4 369 aa29.35■■■□□ 2.29
FAM228B-208ENST00000613899 WWC1Q8IX03 1113 aa29.35■■■□□ 2.29
FAM228B-208ENST00000613899 ATP5J2-PTCD1G3V325 749 aa29.34■■■□□ 2.29
FAM228B-208ENST00000613899 PHAXQ9H814 394 aaKnown RBP29.34■■■□□ 2.29
FAM228B-208ENST00000613899 BBOX1O75936 387 aa29.33■■■□□ 2.29
FAM228B-208ENST00000613899 TRIM28Q13263 835 aaKnown RBP29.33■■■□□ 2.29
FAM228B-208ENST00000613899 IL16Q14005 1332 aa29.32■■■□□ 2.28
FAM228B-208ENST00000613899 LARGE2Q8N3Y3 721 aa29.32■■■□□ 2.28
FAM228B-208ENST00000613899 TSR2Q969E8 191 aaKnown RBP29.32■■■□□ 2.28
FAM228B-208ENST00000613899 COL4A5P29400 1685 aa29.31■■■□□ 2.28
FAM228B-208ENST00000613899 GRAPQ13588 217 aa29.31■■■□□ 2.28
FAM228B-208ENST00000613899 GRAPLQ8TC17 118 aaPredicted RBP29.31■■■□□ 2.28
FAM228B-208ENST00000613899 FAM89AQ96GI7 184 aa29.31■■■□□ 2.28
FAM228B-208ENST00000613899 DDX58O95786 925 aaKnown RBP29.3■■■□□ 2.28
FAM228B-208ENST00000613899 EIF6P56537 245 aaKnown RBP29.3■■■□□ 2.28
FAM228B-208ENST00000613899 SLC51AQ86UW1 340 aa29.3■■■□□ 2.28
FAM228B-208ENST00000613899 GPC2Q8N158 579 aa29.3■■■□□ 2.28
FAM228B-208ENST00000613899 DNAJC5GQ8N7S2 189 aa29.3■■■□□ 2.28
FAM228B-208ENST00000613899 ZNF428Q96B54 188 aa29.3■■■□□ 2.28
FAM228B-208ENST00000613899 LRRC37AA6NMS7 1700 aa29.29■■■□□ 2.28
FAM228B-208ENST00000613899 CHADLQ6NUI6 762 aa29.29■■■□□ 2.28
FAM228B-208ENST00000613899 TMC4Q7Z404 712 aa29.29■■■□□ 2.28
FAM228B-208ENST00000613899 SP8Q8IXZ3 490 aa29.29■■■□□ 2.28
FAM228B-208ENST00000613899 TSPYL6Q8N831 410 aa29.29■■■□□ 2.28
FAM228B-208ENST00000613899 SUPT20HQ8NEM7 779 aa29.29■■■□□ 2.28
FAM228B-208ENST00000613899 VPS33BQ9H267 617 aa29.29■■■□□ 2.28
FAM228B-208ENST00000613899 TAF1DQ9H5J8 278 aaPredicted RBP29.29■■■□□ 2.28
FAM228B-208ENST00000613899 TAF1P21675 1872 aa29.28■■■□□ 2.28
FAM228B-208ENST00000613899 HACL1Q9UJ83 578 aa29.28■■■□□ 2.28
FAM228B-208ENST00000613899 PPIP5K2O43314 1243 aa29.27■■■□□ 2.28
FAM228B-208ENST00000613899 HTRA3P83110 453 aa29.27■■■□□ 2.28
FAM228B-208ENST00000613899 NIM1KQ8IY84 436 aa29.27■■■□□ 2.28
FAM228B-208ENST00000613899 STK31Q9BXU1 1019 aa29.27■■■□□ 2.28
FAM228B-208ENST00000613899 RTFDC1Q9BY42 306 aaPredicted RBP29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms