RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 ARFGEF1Q9Y6D6 1849 aa10.56□□□□□ -0.72
PSMB3-208ENST00000613870 NBPF26B4DH59 902 aa10.56□□□□□ -0.72
PSMB3-208ENST00000613870 SERPINB2P05120 415 aa10.56□□□□□ -0.72
PSMB3-208ENST00000613870 TBC1D9BQ66K14 1250 aa10.56□□□□□ -0.72
PSMB3-208ENST00000613870 NBPF10Q6P3W6 841 aaKnown RBP10.56□□□□□ -0.72
PSMB3-208ENST00000613870 KSR2Q6VAB6 950 aa10.56□□□□□ -0.72
PSMB3-208ENST00000613870 NBPF15Q8N660 670 aa10.56□□□□□ -0.72
PSMB3-208ENST00000613870 SRCIN1Q9C0H9 1055 aa10.56□□□□□ -0.72
PSMB3-208ENST00000613870 SCN7AQ01118 1682 aa10.56□□□□□ -0.72
PSMB3-208ENST00000613870 CAMTA2O94983 1202 aa10.55□□□□□ -0.72
PSMB3-208ENST00000613870 CHRNA5P30532 468 aa10.55□□□□□ -0.72
PSMB3-208ENST00000613870 AAMPQ13685 434 aa10.55□□□□□ -0.72
PSMB3-208ENST00000613870 INTS3Q68E01 1043 aaKnown RBP10.55□□□□□ -0.72
PSMB3-208ENST00000613870 BICDL1Q6ZP65 573 aa10.55□□□□□ -0.72
PSMB3-208ENST00000613870 ANKRD13DQ6ZTN6 518 aa10.55□□□□□ -0.72
PSMB3-208ENST00000613870 ZBTB3Q9H5J0 574 aa10.55□□□□□ -0.72
PSMB3-208ENST00000613870 PIM2Q9P1W9 311 aa10.55□□□□□ -0.72
PSMB3-208ENST00000613870 BCORQ6W2J9 1755 aa10.54□□□□□ -0.72
PSMB3-208ENST00000613870 ADCY9O60503 1353 aa10.54□□□□□ -0.72
PSMB3-208ENST00000613870 TTLL7Q6ZT98 887 aa10.54□□□□□ -0.72
PSMB3-208ENST00000613870 DZIP3Q86Y13 1208 aaKnown RBP10.54□□□□□ -0.72
PSMB3-208ENST00000613870 PLBD2Q8NHP8 589 aa10.54□□□□□ -0.72
PSMB3-208ENST00000613870 MYD88Q99836 296 aa10.54□□□□□ -0.72
PSMB3-208ENST00000613870 LAMB4A4D0S4 1761 aa10.54□□□□□ -0.72
PSMB3-208ENST00000613870 CARMIL3Q8ND23 1372 aa10.53□□□□□ -0.72
PSMB3-208ENST00000613870 ANKRD31Q8N7Z5 1873 aa10.53□□□□□ -0.72
PSMB3-208ENST00000613870 ATP10DQ9P241 1426 aa10.53□□□□□ -0.72
PSMB3-208ENST00000613870 C1orf115Q9H7X2 142 aa10.53□□□□□ -0.72
PSMB3-208ENST00000613870 C9orf78Q9NZ63 289 aaPredicted RBP10.53□□□□□ -0.72
PSMB3-208ENST00000613870 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.72
PSMB3-208ENST00000613870 ATP5J2-PTCD1G3V325 749 aa10.52□□□□□ -0.73
PSMB3-208ENST00000613870 ZBTB7BO15156 539 aaPredicted RBP10.52□□□□□ -0.73
PSMB3-208ENST00000613870 GNAI3P08754 354 aa10.52□□□□□ -0.73
PSMB3-208ENST00000613870 UBTFL1P0CB47 393 aaPredicted RBP10.52□□□□□ -0.73
PSMB3-208ENST00000613870 DALRD3Q5D0E6 543 aaKnown RBP10.52□□□□□ -0.73
PSMB3-208ENST00000613870 PRR5LQ6MZQ0 368 aa10.52□□□□□ -0.73
PSMB3-208ENST00000613870 ARHGAP27Q6ZUM4 889 aa10.52□□□□□ -0.73
PSMB3-208ENST00000613870 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.73
PSMB3-208ENST00000613870 MEIS3Q99687 375 aa10.52□□□□□ -0.73
PSMB3-208ENST00000613870 METTL22Q9BUU2 404 aaPredicted RBP10.52□□□□□ -0.73
PSMB3-208ENST00000613870 RWDD1Q9H446 243 aaPredicted RBP10.52□□□□□ -0.73
PSMB3-208ENST00000613870 SBF1O95248 1867 aa10.51□□□□□ -0.73
PSMB3-208ENST00000613870 GNAI2P04899 355 aa10.51□□□□□ -0.73
PSMB3-208ENST00000613870 C1QTNF8P60827 252 aa10.51□□□□□ -0.73
PSMB3-208ENST00000613870 CWF19L2Q2TBE0 894 aaKnown RBP10.51□□□□□ -0.73
PSMB3-208ENST00000613870 BEND3Q5T5X7 828 aa10.51□□□□□ -0.73
PSMB3-208ENST00000613870 LINS1Q8NG48 757 aa10.51□□□□□ -0.73
PSMB3-208ENST00000613870 SETDB2Q96T68 719 aa10.51□□□□□ -0.73
PSMB3-208ENST00000613870 ZBTB40Q9NUA8 1239 aa10.51□□□□□ -0.73
PSMB3-208ENST00000613870 CACNA1FO60840 1977 aa10.5□□□□□ -0.73
PSMB3-208ENST00000613870 ALDH1L1O75891 902 aa10.5□□□□□ -0.73
PSMB3-208ENST00000613870 HLFQ16534 295 aa10.5□□□□□ -0.73
PSMB3-208ENST00000613870 CLEC4GQ6UXB4 293 aa10.5□□□□□ -0.73
PSMB3-208ENST00000613870 LRP10Q7Z4F1 713 aa10.5□□□□□ -0.73
PSMB3-208ENST00000613870 HDAC5Q9UQL6 1122 aa10.5□□□□□ -0.73
PSMB3-208ENST00000613870 PCDHB15Q9Y5E8 787 aa10.5□□□□□ -0.73
PSMB3-208ENST00000613870 MAP3K15Q6ZN16 1313 aa10.5□□□□□ -0.73
PSMB3-208ENST00000613870 NUP98P52948 1817 aa10.49□□□□□ -0.73
PSMB3-208ENST00000613870 H0YIN7 160 aa10.49□□□□□ -0.73
PSMB3-208ENST00000613870 GPTP24298 496 aa10.49□□□□□ -0.73
PSMB3-208ENST00000613870 HSP90AB3PQ58FF7 597 aa10.49□□□□□ -0.73
PSMB3-208ENST00000613870 C2CD5Q86YS7 1000 aa10.49□□□□□ -0.73
PSMB3-208ENST00000613870 ZNF526Q8TF50 670 aaPredicted RBP10.49□□□□□ -0.73
PSMB3-208ENST00000613870 BRIP1Q9BX63 1249 aa10.49□□□□□ -0.73
PSMB3-208ENST00000613870 GPBP1L1Q9HC44 474 aaPredicted RBP10.49□□□□□ -0.73
PSMB3-208ENST00000613870 CWC25Q9NXE8 425 aaPredicted RBP10.49□□□□□ -0.73
PSMB3-208ENST00000613870 COL11A2P13942 1736 aaPredicted RBP10.49□□□□□ -0.73
PSMB3-208ENST00000613870 NEURL1BA8MQ27 555 aa10.48□□□□□ -0.73
PSMB3-208ENST00000613870 GRM8O00222 908 aa10.48□□□□□ -0.73
PSMB3-208ENST00000613870 PDE6BP35913 854 aa10.48□□□□□ -0.73
PSMB3-208ENST00000613870 CENPQQ7L2Z9 268 aaPredicted RBP10.48□□□□□ -0.73
PSMB3-208ENST00000613870 TTLL6Q8N841 843 aa10.48□□□□□ -0.73
PSMB3-208ENST00000613870 JARID2Q92833 1246 aaPredicted RBP10.48□□□□□ -0.73
PSMB3-208ENST00000613870 ZNF652Q9Y2D9 606 aa10.48□□□□□ -0.73
PSMB3-208ENST00000613870 LRRFIP2Q9Y608 721 aaKnown RBP10.48□□□□□ -0.73
PSMB3-208ENST00000613870 CCDC88AQ3V6T2 1871 aa10.48□□□□□ -0.73
PSMB3-208ENST00000613870 FAM177BA6PVY3 158 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 RGL2O15211 777 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 HMMRO75330 724 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 IGKV5-2P06315 115 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 TCIRG1Q13488 830 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 GCKRQ14397 625 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 RTL5Q5HYW3 569 aaPredicted RBP10.47□□□□□ -0.73
PSMB3-208ENST00000613870 C9orf131Q5VYM1 1079 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 CNBD1Q8NA66 436 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 USP44Q9H0E7 712 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 BCL11AQ9H165 835 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 ZBTB47Q9UFB7 747 aaPredicted RBP10.47□□□□□ -0.73
PSMB3-208ENST00000613870 NIP7Q9Y221 180 aaKnown RBP eCLIP10.47□□□□□ -0.73
PSMB3-208ENST00000613870 CACNA1SQ13698 1873 aa10.47□□□□□ -0.73
PSMB3-208ENST00000613870 CEP350Q5VT06 3117 aa10.46□□□□□ -0.73
PSMB3-208ENST00000613870 ERVV-1B6SEH8 477 aa10.46□□□□□ -0.73
PSMB3-208ENST00000613870 IGHDP01880 384 aa10.46□□□□□ -0.73
PSMB3-208ENST00000613870 NBPF7P0C2Y1 421 aaPredicted RBP10.46□□□□□ -0.73
PSMB3-208ENST00000613870 PRELPP51888 382 aa10.46□□□□□ -0.73
PSMB3-208ENST00000613870 ST5P78524 1137 aa10.46□□□□□ -0.73
PSMB3-208ENST00000613870 RASSF7Q02833 373 aa10.46□□□□□ -0.73
PSMB3-208ENST00000613870 GIGYF2Q6Y7W6 1299 aaKnown RBP10.46□□□□□ -0.73
PSMB3-208ENST00000613870 UBE3BQ7Z3V4 1068 aa10.46□□□□□ -0.73
PSMB3-208ENST00000613870 NBPF5PQ86XG9 351 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms