RNA–Protein interactions for RNA: ENST00000613857.4

SGPL1-206, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 4

Gene SGPL1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-206ENST00000613857 SYNE4Q8N205 404 aa16.34■□□□□ 0.21
SGPL1-206ENST00000613857 CHMP4AQ9BY43 222 aa16.34■□□□□ 0.21
SGPL1-206ENST00000613857 ADCY9O60503 1353 aa16.34■□□□□ 0.21
SGPL1-206ENST00000613857 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
SGPL1-206ENST00000613857 PRELPP51888 382 aa16.33■□□□□ 0.2
SGPL1-206ENST00000613857 GOLGA2Q08379 1002 aa16.33■□□□□ 0.2
SGPL1-206ENST00000613857 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
SGPL1-206ENST00000613857 C3orf67Q6ZVT6 689 aa16.33■□□□□ 0.2
SGPL1-206ENST00000613857 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
SGPL1-206ENST00000613857 RNF181Q9P0P0 153 aa16.33■□□□□ 0.2
SGPL1-206ENST00000613857 TRMT112Q9UI30 125 aaKnown RBP16.33■□□□□ 0.2
SGPL1-206ENST00000613857 NFKBIEO00221 500 aa16.32■□□□□ 0.2
SGPL1-206ENST00000613857 VAMP4O75379 141 aa16.32■□□□□ 0.2
SGPL1-206ENST00000613857 SLC10A5Q5PT55 438 aa16.32■□□□□ 0.2
SGPL1-206ENST00000613857 SLX4Q8IY92 1834 aa16.32■□□□□ 0.2
SGPL1-206ENST00000613857 STK31Q9BXU1 1019 aa16.32■□□□□ 0.2
SGPL1-206ENST00000613857 TNRC6CQ9HCJ0 1690 aaKnown RBP16.32■□□□□ 0.2
SGPL1-206ENST00000613857 ZNF521Q96K83 1311 aa16.31■□□□□ 0.2
SGPL1-206ENST00000613857 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
SGPL1-206ENST00000613857 HCLS1P14317 486 aaPredicted RBP16.31■□□□□ 0.2
SGPL1-206ENST00000613857 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
SGPL1-206ENST00000613857 CRY2Q49AN0 593 aa16.31■□□□□ 0.2
SGPL1-206ENST00000613857 G2E3Q7L622 706 aa16.31■□□□□ 0.2
SGPL1-206ENST00000613857 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
SGPL1-206ENST00000613857 RPGRQ92834 1020 aaKnown RBP16.31■□□□□ 0.2
SGPL1-206ENST00000613857 NLRP3Q96P20 1036 aa16.31■□□□□ 0.2
SGPL1-206ENST00000613857 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
SGPL1-206ENST00000613857 OLFM4Q6UX06 510 aa16.3■□□□□ 0.2
SGPL1-206ENST00000613857 MIER1Q8N108 512 aa16.3■□□□□ 0.2
SGPL1-206ENST00000613857 MYD88Q99836 296 aa16.3■□□□□ 0.2
SGPL1-206ENST00000613857 GPBP1L1Q9HC44 474 aaPredicted RBP16.3■□□□□ 0.2
SGPL1-206ENST00000613857 ANKRD36CQ5JPF3 1778 aa16.3■□□□□ 0.2
SGPL1-206ENST00000613857 RIC1Q4ADV7 1423 aa16.29■□□□□ 0.2
SGPL1-206ENST00000613857 CACNA1SQ13698 1873 aa16.29■□□□□ 0.2
SGPL1-206ENST00000613857 RNF123Q5XPI4 1314 aa16.29■□□□□ 0.2
SGPL1-206ENST00000613857 SH3TC1Q8TE82 1336 aa16.29■□□□□ 0.2
SGPL1-206ENST00000613857 DDX58O95786 925 aaKnown RBP16.29■□□□□ 0.2
SGPL1-206ENST00000613857 LMNB1P20700 586 aa16.29■□□□□ 0.2
SGPL1-206ENST00000613857 HOXA10P31260 410 aaPredicted RBP16.29■□□□□ 0.2
SGPL1-206ENST00000613857 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
SGPL1-206ENST00000613857 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
SGPL1-206ENST00000613857 PI4KAP2A4QPH2 592 aa16.28■□□□□ 0.2
SGPL1-206ENST00000613857 TRIM28Q13263 835 aaKnown RBP16.28■□□□□ 0.2
SGPL1-206ENST00000613857 PI4KAP1Q8N8J0 262 aa16.28■□□□□ 0.2
SGPL1-206ENST00000613857 RBM17Q96I25 401 aaKnown RBP16.28■□□□□ 0.2
SGPL1-206ENST00000613857 METTL22Q9BUU2 404 aaPredicted RBP16.28■□□□□ 0.2
SGPL1-206ENST00000613857 MAP3K2Q9Y2U5 619 aa16.28■□□□□ 0.2
SGPL1-206ENST00000613857 CCDC93Q567U6 631 aa16.27■□□□□ 0.2
SGPL1-206ENST00000613857 SOGA3Q5TF21 947 aa16.27■□□□□ 0.2
SGPL1-206ENST00000613857 KSR2Q6VAB6 950 aa16.27■□□□□ 0.2
SGPL1-206ENST00000613857 CRAMP1Q96RY5 1269 aa16.27■□□□□ 0.2
SGPL1-206ENST00000613857 ARFGEF2Q9Y6D5 1785 aa16.27■□□□□ 0.2
SGPL1-206ENST00000613857 SBF1O95248 1867 aa16.27■□□□□ 0.19
SGPL1-206ENST00000613857 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
SGPL1-206ENST00000613857 JARID2Q92833 1246 aaPredicted RBP16.26■□□□□ 0.19
SGPL1-206ENST00000613857 TAOK3Q9H2K8 898 aa16.26■□□□□ 0.19
SGPL1-206ENST00000613857 FLIIQ13045 1269 aa16.25■□□□□ 0.19
SGPL1-206ENST00000613857 CCDC191Q8NCU4 936 aa16.25■□□□□ 0.19
SGPL1-206ENST00000613857 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
SGPL1-206ENST00000613857 IRS4O14654 1257 aaPredicted RBP16.24■□□□□ 0.19
SGPL1-206ENST00000613857 IGKV5-2P06315 115 aa16.24■□□□□ 0.19
SGPL1-206ENST00000613857 ZBTB38Q8NAP3 1195 aaPredicted RBP16.24■□□□□ 0.19
SGPL1-206ENST00000613857 CDCA7LQ96GN5 454 aa16.24■□□□□ 0.19
SGPL1-206ENST00000613857 FER1L6Q2WGJ9 1857 aa16.24■□□□□ 0.19
SGPL1-206ENST00000613857 ABCC4O15439 1325 aa16.23■□□□□ 0.19
SGPL1-206ENST00000613857 E9PSI1 815 aa16.23■□□□□ 0.19
SGPL1-206ENST00000613857 PPEF1O14829 653 aaPredicted RBP16.23■□□□□ 0.19
SGPL1-206ENST00000613857 FKBP4Q02790 459 aaKnown RBP eCLIP16.23■□□□□ 0.19
SGPL1-206ENST00000613857 SLFN5Q08AF3 891 aa16.23■□□□□ 0.19
SGPL1-206ENST00000613857 FKBP5Q13451 457 aaPredicted RBP16.23■□□□□ 0.19
SGPL1-206ENST00000613857 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
SGPL1-206ENST00000613857 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
SGPL1-206ENST00000613857 NMRK2Q9NPI5 230 aa16.23■□□□□ 0.19
SGPL1-206ENST00000613857 ZNF277Q9NRM2 450 aaPredicted RBP16.23■□□□□ 0.19
SGPL1-206ENST00000613857 CWC25Q9NXE8 425 aaPredicted RBP16.23■□□□□ 0.19
SGPL1-206ENST00000613857 KIF3CO14782 793 aa16.22■□□□□ 0.19
SGPL1-206ENST00000613857 NEXNQ0ZGT2 675 aa16.22■□□□□ 0.19
SGPL1-206ENST00000613857 CWF19L2Q2TBE0 894 aaKnown RBP16.22■□□□□ 0.19
SGPL1-206ENST00000613857 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
SGPL1-206ENST00000613857 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
SGPL1-206ENST00000613857 C1QTNF8P60827 252 aa16.21■□□□□ 0.19
SGPL1-206ENST00000613857 SF3B3Q15393 1217 aaKnown RBP16.21■□□□□ 0.19
SGPL1-206ENST00000613857 CC2D2BQ6DHV5 1058 aa16.21■□□□□ 0.19
SGPL1-206ENST00000613857 LAMB2P55268 1798 aa16.21■□□□□ 0.18
SGPL1-206ENST00000613857 NEURL1BA8MQ27 555 aa16.2■□□□□ 0.18
SGPL1-206ENST00000613857 BBOX1O75936 387 aa16.2■□□□□ 0.18
SGPL1-206ENST00000613857 GRAPQ13588 217 aa16.2■□□□□ 0.18
SGPL1-206ENST00000613857 GRAPLQ8TC17 118 aaPredicted RBP16.2■□□□□ 0.18
SGPL1-206ENST00000613857 DNAAF4Q8WXU2 420 aa16.2■□□□□ 0.18
SGPL1-206ENST00000613857 RRAGCQ9HB90 399 aa16.2■□□□□ 0.18
SGPL1-206ENST00000613857 ATP6V0A2Q9Y487 856 aa16.2■□□□□ 0.18
SGPL1-206ENST00000613857 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
SGPL1-206ENST00000613857 ZC3H4Q9UPT8 1303 aaKnown RBP16.19■□□□□ 0.18
SGPL1-206ENST00000613857 SNED1Q8TER0 1413 aa16.19■□□□□ 0.18
SGPL1-206ENST00000613857 DDX60Q8IY21 1712 aaKnown RBP16.19■□□□□ 0.18
SGPL1-206ENST00000613857 GLTPD2A6NH11 291 aa16.19■□□□□ 0.18
SGPL1-206ENST00000613857 F6X3S4 739 aa16.19■□□□□ 0.18
SGPL1-206ENST00000613857 PDE8AO60658 829 aa16.18■□□□□ 0.18
SGPL1-206ENST00000613857 IARSP41252 1262 aaKnown RBP16.18■□□□□ 0.18
SGPL1-206ENST00000613857 SP8Q8IXZ3 490 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms