RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 SSFA2P28290 1259 aa17.22■□□□□ 0.35
TMEM254-213ENST00000613758 UBE3BQ7Z3V4 1068 aa17.22■□□□□ 0.35
TMEM254-213ENST00000613758 CCDC125Q86Z20 511 aa17.22■□□□□ 0.35
TMEM254-213ENST00000613758 NUP98P52948 1817 aa17.21■□□□□ 0.35
TMEM254-213ENST00000613758 AFDNP55196 1824 aaKnown RBP17.21■□□□□ 0.35
TMEM254-213ENST00000613758 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
TMEM254-213ENST00000613758 CASP7P55210 303 aa17.21■□□□□ 0.34
TMEM254-213ENST00000613758 ATP8B2P98198 1209 aa17.21■□□□□ 0.34
TMEM254-213ENST00000613758 ZNF827Q17R98 1081 aa17.21■□□□□ 0.34
TMEM254-213ENST00000613758 DEFB132Q7Z7B7 95 aa17.21■□□□□ 0.34
TMEM254-213ENST00000613758 BCL2L12Q9HB09 334 aa17.21■□□□□ 0.34
TMEM254-213ENST00000613758 TFCP2L1Q9NZI6 479 aa17.21■□□□□ 0.34
TMEM254-213ENST00000613758 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.34
TMEM254-213ENST00000613758 RTL5Q5HYW3 569 aaPredicted RBP17.19■□□□□ 0.34
TMEM254-213ENST00000613758 KAZALD1Q96I82 304 aa17.19■□□□□ 0.34
TMEM254-213ENST00000613758 UBN2Q6ZU65 1347 aa17.19■□□□□ 0.34
TMEM254-213ENST00000613758 USP42Q9H9J4 1324 aaKnown RBP17.19■□□□□ 0.34
TMEM254-213ENST00000613758 UBR3Q6ZT12 1888 aa17.19■□□□□ 0.34
TMEM254-213ENST00000613758 PCCAP05165 728 aaPredicted RBP17.19■□□□□ 0.34
TMEM254-213ENST00000613758 PARP10Q53GL7 1025 aa17.19■□□□□ 0.34
TMEM254-213ENST00000613758 ZBTB38Q8NAP3 1195 aaPredicted RBP17.19■□□□□ 0.34
TMEM254-213ENST00000613758 SKAP1Q86WV1 359 aa17.18■□□□□ 0.34
TMEM254-213ENST00000613758 HMMRO75330 724 aa17.18■□□□□ 0.34
TMEM254-213ENST00000613758 SUSD4Q5VX71 490 aa17.18■□□□□ 0.34
TMEM254-213ENST00000613758 FAM89AQ96GI7 184 aa17.18■□□□□ 0.34
TMEM254-213ENST00000613758 BICC1Q9H694 974 aaKnown RBP17.18■□□□□ 0.34
TMEM254-213ENST00000613758 TRMT112Q9UI30 125 aaKnown RBP17.18■□□□□ 0.34
TMEM254-213ENST00000613758 BCORQ6W2J9 1755 aa17.18■□□□□ 0.34
TMEM254-213ENST00000613758 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
TMEM254-213ENST00000613758 PNMA6EA0A0J9YXQ4 647 aa17.17■□□□□ 0.34
TMEM254-213ENST00000613758 TBC1D9BQ66K14 1250 aa17.17■□□□□ 0.34
TMEM254-213ENST00000613758 PPP1R42Q7Z4L9 355 aa17.17■□□□□ 0.34
TMEM254-213ENST00000613758 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
TMEM254-213ENST00000613758 BICDL1Q6ZP65 573 aa17.16■□□□□ 0.34
TMEM254-213ENST00000613758 FLAD1Q8NFF5 587 aa17.16■□□□□ 0.34
TMEM254-213ENST00000613758 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
TMEM254-213ENST00000613758 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
TMEM254-213ENST00000613758 SCN7AQ01118 1682 aa17.15■□□□□ 0.34
TMEM254-213ENST00000613758 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
TMEM254-213ENST00000613758 MTX1Q13505 466 aa17.15■□□□□ 0.34
TMEM254-213ENST00000613758 COL23A1Q86Y22 540 aaPredicted RBP17.15■□□□□ 0.34
TMEM254-213ENST00000613758 SMC5Q8IY18 1101 aa17.15■□□□□ 0.34
TMEM254-213ENST00000613758 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
TMEM254-213ENST00000613758 SSH3Q8TE77 659 aa17.15■□□□□ 0.34
TMEM254-213ENST00000613758 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
TMEM254-213ENST00000613758 DCTPP1Q9H773 170 aa17.15■□□□□ 0.34
TMEM254-213ENST00000613758 ANO8Q9HCE9 1232 aaPredicted RBP17.15■□□□□ 0.34
TMEM254-213ENST00000613758 STK32BQ9NY57 414 aa17.15■□□□□ 0.34
TMEM254-213ENST00000613758 C4AP0C0L4 1744 aa17.15■□□□□ 0.34
TMEM254-213ENST00000613758 CDHR2Q9BYE9 1310 aa17.14■□□□□ 0.33
TMEM254-213ENST00000613758 GYS1P13807 737 aa17.14■□□□□ 0.33
TMEM254-213ENST00000613758 FOXO4P98177 505 aa17.14■□□□□ 0.33
TMEM254-213ENST00000613758 POLA2Q14181 598 aa17.14■□□□□ 0.33
TMEM254-213ENST00000613758 SLC15A2Q16348 729 aa17.14■□□□□ 0.33
TMEM254-213ENST00000613758 GCC1Q96CN9 775 aa17.14■□□□□ 0.33
TMEM254-213ENST00000613758 MSH5O43196 834 aa17.13■□□□□ 0.33
TMEM254-213ENST00000613758 SH3TC1Q8TE82 1336 aa17.13■□□□□ 0.33
TMEM254-213ENST00000613758 NTSR2O95665 410 aa17.13■□□□□ 0.33
TMEM254-213ENST00000613758 RABL6Q3YEC7 729 aaPredicted RBP17.13■□□□□ 0.33
TMEM254-213ENST00000613758 PLA2G12BQ9BX93 195 aa17.13■□□□□ 0.33
TMEM254-213ENST00000613758 IRS4O14654 1257 aaPredicted RBP17.12■□□□□ 0.33
TMEM254-213ENST00000613758 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
TMEM254-213ENST00000613758 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
TMEM254-213ENST00000613758 NFIXQ14938 502 aa17.11■□□□□ 0.33
TMEM254-213ENST00000613758 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
TMEM254-213ENST00000613758 NUTM1Q86Y26 1132 aa17.11■□□□□ 0.33
TMEM254-213ENST00000613758 PDZRN3Q9UPQ7 1066 aa17.11■□□□□ 0.33
TMEM254-213ENST00000613758 NYXQ9GZU5 481 aa17.1■□□□□ 0.33
TMEM254-213ENST00000613758 PDE8AO60658 829 aa17.09■□□□□ 0.33
TMEM254-213ENST00000613758 HCLS1P14317 486 aaPredicted RBP17.09■□□□□ 0.33
TMEM254-213ENST00000613758 NBPF5PQ86XG9 351 aaPredicted RBP17.09■□□□□ 0.33
TMEM254-213ENST00000613758 CHMP3Q9Y3E7 222 aa17.09■□□□□ 0.33
TMEM254-213ENST00000613758 RBM19Q9Y4C8 960 aaKnown RBP17.09■□□□□ 0.33
TMEM254-213ENST00000613758 TUBGCP6Q96RT7 1819 aa17.09■□□□□ 0.33
TMEM254-213ENST00000613758 SURF6O75683 361 aaKnown RBP17.09■□□□□ 0.33
TMEM254-213ENST00000613758 CSF1RP07333 972 aa17.09■□□□□ 0.33
TMEM254-213ENST00000613758 HSP90B1P14625 803 aaKnown RBP17.09■□□□□ 0.33
TMEM254-213ENST00000613758 GTF2E1P29083 439 aaPredicted RBP17.09■□□□□ 0.33
TMEM254-213ENST00000613758 TM4SF1P30408 202 aa17.09■□□□□ 0.33
TMEM254-213ENST00000613758 ERFEQ4G0M1 354 aa17.09■□□□□ 0.33
TMEM254-213ENST00000613758 ANKRD45Q5TZF3 282 aa17.09■□□□□ 0.33
TMEM254-213ENST00000613758 TPTE2Q6XPS3 522 aa17.09■□□□□ 0.33
TMEM254-213ENST00000613758 EXOC6BQ9Y2D4 811 aa17.09■□□□□ 0.33
TMEM254-213ENST00000613758 NUCB1Q02818 461 aa17.08■□□□□ 0.33
TMEM254-213ENST00000613758 NLGN1Q8N2Q7 840 aa17.08■□□□□ 0.33
TMEM254-213ENST00000613758 CARMIL3Q8ND23 1372 aa17.08■□□□□ 0.32
TMEM254-213ENST00000613758 APBB1O00213 710 aa17.07■□□□□ 0.32
TMEM254-213ENST00000613758 RFX5P48382 616 aaPredicted RBP17.07■□□□□ 0.32
TMEM254-213ENST00000613758 CTSWP56202 376 aa17.07■□□□□ 0.32
TMEM254-213ENST00000613758 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
TMEM254-213ENST00000613758 PA2G4Q9UQ80 394 aaKnown RBP17.07■□□□□ 0.32
TMEM254-213ENST00000613758 NOP58Q9Y2X3 529 aaKnown RBP17.07■□□□□ 0.32
TMEM254-213ENST00000613758 SLC10A5Q5PT55 438 aa17.06■□□□□ 0.32
TMEM254-213ENST00000613758 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
TMEM254-213ENST00000613758 CCDC85AQ96PX6 553 aaPredicted RBP17.06■□□□□ 0.32
TMEM254-213ENST00000613758 NPHP1O15259 732 aa17.05■□□□□ 0.32
TMEM254-213ENST00000613758 RAB11FIP3O75154 756 aa17.05■□□□□ 0.32
TMEM254-213ENST00000613758 HSP90AB4PQ58FF6 505 aa17.05■□□□□ 0.32
TMEM254-213ENST00000613758 KLHDC4Q8TBB5 520 aa17.05■□□□□ 0.32
TMEM254-213ENST00000613758 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms