RNA–Protein interactions for RNA: ENST00000613563.1

GRAMD4P4-201, Transcript of GRAM domain containing 4 pseudogene 4, humanhuman

BASIC

Gene GRAMD4P4, Length 1,115 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4P4-201ENST00000613563 ZNF853P0CG23 659 aa28.84■■■□□ 2.21
GRAMD4P4-201ENST00000613563 GNAI1P63096 354 aa28.84■■■□□ 2.21
GRAMD4P4-201ENST00000613563 HSP90AB3PQ58FF7 597 aa28.84■■■□□ 2.21
GRAMD4P4-201ENST00000613563 OLFM4Q6UX06 510 aa28.84■■■□□ 2.21
GRAMD4P4-201ENST00000613563 RBM46Q8TBY0 533 aaKnown RBP28.84■■■□□ 2.21
GRAMD4P4-201ENST00000613563 UTP14AQ9BVJ6 771 aaKnown RBP28.84■■■□□ 2.21
GRAMD4P4-201ENST00000613563 RIC1Q4ADV7 1423 aa28.84■■■□□ 2.21
GRAMD4P4-201ENST00000613563 DPY19L2Q6NUT2 758 aa28.83■■■□□ 2.21
GRAMD4P4-201ENST00000613563 ANKRD36CQ5JPF3 1778 aa28.83■■■□□ 2.21
GRAMD4P4-201ENST00000613563 ANP32CO43423 234 aa28.82■■■□□ 2.2
GRAMD4P4-201ENST00000613563 DBF4Q9UBU7 674 aaPredicted RBP28.82■■■□□ 2.2
GRAMD4P4-201ENST00000613563 FKBP4Q02790 459 aaKnown RBP eCLIP28.8■■■□□ 2.2
GRAMD4P4-201ENST00000613563 TCIRG1Q13488 830 aa28.8■■■□□ 2.2
GRAMD4P4-201ENST00000613563 RTKN2Q8IZC4 609 aa28.8■■■□□ 2.2
GRAMD4P4-201ENST00000613563 RBM17Q96I25 401 aaKnown RBP28.8■■■□□ 2.2
GRAMD4P4-201ENST00000613563 HOXA10P31260 410 aaPredicted RBP28.79■■■□□ 2.2
GRAMD4P4-201ENST00000613563 C3orf67Q6ZVT6 689 aa28.79■■■□□ 2.2
GRAMD4P4-201ENST00000613563 NLRP10Q86W26 655 aa28.79■■■□□ 2.2
GRAMD4P4-201ENST00000613563 NLRP3Q96P20 1036 aa28.79■■■□□ 2.2
GRAMD4P4-201ENST00000613563 MRS2Q9HD23 443 aa28.79■■■□□ 2.2
GRAMD4P4-201ENST00000613563 VEGFAP15692 232 aaPredicted RBP28.78■■■□□ 2.2
GRAMD4P4-201ENST00000613563 ELL2O00472 640 aaPredicted RBP28.77■■■□□ 2.2
GRAMD4P4-201ENST00000613563 PLBD2Q8NHP8 589 aa28.77■■■□□ 2.2
GRAMD4P4-201ENST00000613563 ZNF277Q9NRM2 450 aaPredicted RBP28.77■■■□□ 2.2
GRAMD4P4-201ENST00000613563 HYPKQ9NX55 129 aa28.77■■■□□ 2.2
GRAMD4P4-201ENST00000613563 RNF123Q5XPI4 1314 aa28.76■■■□□ 2.19
GRAMD4P4-201ENST00000613563 SLC10A5Q5PT55 438 aa28.76■■■□□ 2.19
GRAMD4P4-201ENST00000613563 ANKRD13DQ6ZTN6 518 aa28.76■■■□□ 2.19
GRAMD4P4-201ENST00000613563 FSTL1Q12841 308 aa28.75■■■□□ 2.19
GRAMD4P4-201ENST00000613563 CRAMP1Q96RY5 1269 aa28.75■■■□□ 2.19
GRAMD4P4-201ENST00000613563 TRMT112Q9UI30 125 aaKnown RBP28.75■■■□□ 2.19
GRAMD4P4-201ENST00000613563 WDR90Q96KV7 1748 aa28.74■■■□□ 2.19
GRAMD4P4-201ENST00000613563 APLP1P51693 650 aa28.74■■■□□ 2.19
GRAMD4P4-201ENST00000613563 SYNE4Q8N205 404 aa28.74■■■□□ 2.19
GRAMD4P4-201ENST00000613563 ZNF428Q96B54 188 aa28.74■■■□□ 2.19
GRAMD4P4-201ENST00000613563 TCERG1O14776 1098 aaKnown RBP28.73■■■□□ 2.19
GRAMD4P4-201ENST00000613563 PPEF1O14829 653 aaPredicted RBP28.73■■■□□ 2.19
GRAMD4P4-201ENST00000613563 CC2D2BQ6DHV5 1058 aa28.73■■■□□ 2.19
GRAMD4P4-201ENST00000613563 POTECB2RU33 542 aa28.72■■■□□ 2.19
GRAMD4P4-201ENST00000613563 DDNO94850 711 aaPredicted RBP28.72■■■□□ 2.19
GRAMD4P4-201ENST00000613563 HCLS1P14317 486 aaPredicted RBP28.72■■■□□ 2.19
GRAMD4P4-201ENST00000613563 C8orf58Q8NAV2 365 aa28.72■■■□□ 2.19
GRAMD4P4-201ENST00000613563 SMC1BQ8NDV3 1235 aa28.72■■■□□ 2.19
GRAMD4P4-201ENST00000613563 SH3TC1Q8TE82 1336 aa28.71■■■□□ 2.19
GRAMD4P4-201ENST00000613563 IARSP41252 1262 aaKnown RBP28.71■■■□□ 2.19
GRAMD4P4-201ENST00000613563 SNED1Q8TER0 1413 aa28.7■■■□□ 2.19
GRAMD4P4-201ENST00000613563 CCDC27Q2M243 656 aa28.7■■■□□ 2.18
GRAMD4P4-201ENST00000613563 PSMD1Q99460 953 aa28.7■■■□□ 2.18
GRAMD4P4-201ENST00000613563 ATP5J2-PTCD1G3V325 749 aa28.69■■■□□ 2.18
GRAMD4P4-201ENST00000613563 ISCA1Q9BUE6 129 aa28.69■■■□□ 2.18
GRAMD4P4-201ENST00000613563 PHAXQ9H814 394 aaKnown RBP28.69■■■□□ 2.18
GRAMD4P4-201ENST00000613563 LAMB2P55268 1798 aa28.69■■■□□ 2.18
GRAMD4P4-201ENST00000613563 GOLGA2Q08379 1002 aa28.68■■■□□ 2.18
GRAMD4P4-201ENST00000613563 RIC3Q7Z5B4 369 aa28.68■■■□□ 2.18
GRAMD4P4-201ENST00000613563 SLC51AQ86UW1 340 aa28.68■■■□□ 2.18
GRAMD4P4-201ENST00000613563 WWC1Q8IX03 1113 aa28.68■■■□□ 2.18
GRAMD4P4-201ENST00000613563 TSR2Q969E8 191 aaKnown RBP28.68■■■□□ 2.18
GRAMD4P4-201ENST00000613563 CEP350Q5VT06 3117 aa28.68■■■□□ 2.18
GRAMD4P4-201ENST00000613563 ABCC4O15439 1325 aa28.68■■■□□ 2.18
GRAMD4P4-201ENST00000613563 GRIPAP1Q4V328 841 aa28.67■■■□□ 2.18
GRAMD4P4-201ENST00000613563 TMX4Q9H1E5 349 aaPredicted RBP28.67■■■□□ 2.18
GRAMD4P4-201ENST00000613563 ZNF541Q9H0D2 1346 aa28.66■■■□□ 2.18
GRAMD4P4-201ENST00000613563 CCDC30Q5VVM6 783 aa28.65■■■□□ 2.18
GRAMD4P4-201ENST00000613563 TSPYL6Q8N831 410 aa28.65■■■□□ 2.18
GRAMD4P4-201ENST00000613563 CHMP4AQ9BY43 222 aa28.65■■■□□ 2.18
GRAMD4P4-201ENST00000613563 DDX46Q7L014 1031 aaKnown RBP28.64■■■□□ 2.18
GRAMD4P4-201ENST00000613563 JDP2Q8WYK2 163 aa28.64■■■□□ 2.18
GRAMD4P4-201ENST00000613563 FAM89AQ96GI7 184 aa28.64■■■□□ 2.18
GRAMD4P4-201ENST00000613563 ATP6V0A2Q9Y487 856 aa28.64■■■□□ 2.18
GRAMD4P4-201ENST00000613563 FZD9O00144 591 aa28.62■■■□□ 2.17
GRAMD4P4-201ENST00000613563 SALL2Q9Y467 1007 aaPredicted RBP28.62■■■□□ 2.17
GRAMD4P4-201ENST00000613563 DDX60Q8IY21 1712 aaKnown RBP28.62■■■□□ 2.17
GRAMD4P4-201ENST00000613563 IQCA1LA6NCM1 817 aa28.61■■■□□ 2.17
GRAMD4P4-201ENST00000613563 BBOX1O75936 387 aa28.61■■■□□ 2.17
GRAMD4P4-201ENST00000613563 HTRA3P83110 453 aa28.61■■■□□ 2.17
GRAMD4P4-201ENST00000613563 RTL5Q5HYW3 569 aaPredicted RBP28.61■■■□□ 2.17
GRAMD4P4-201ENST00000613563 LARGE2Q8N3Y3 721 aa28.61■■■□□ 2.17
GRAMD4P4-201ENST00000613563 L3MBTL3Q96JM7 780 aaPredicted RBP28.61■■■□□ 2.17
GRAMD4P4-201ENST00000613563 TRIM28Q13263 835 aaKnown RBP28.6■■■□□ 2.17
GRAMD4P4-201ENST00000613563 GRAPQ13588 217 aa28.6■■■□□ 2.17
GRAMD4P4-201ENST00000613563 NCBP3Q53F19 620 aaKnown RBP28.6■■■□□ 2.17
GRAMD4P4-201ENST00000613563 GRAPLQ8TC17 118 aaPredicted RBP28.6■■■□□ 2.17
GRAMD4P4-201ENST00000613563 MYD88Q99836 296 aa28.6■■■□□ 2.17
GRAMD4P4-201ENST00000613563 DDX58O95786 925 aaKnown RBP28.59■■■□□ 2.17
GRAMD4P4-201ENST00000613563 SP8Q8IXZ3 490 aa28.59■■■□□ 2.17
GRAMD4P4-201ENST00000613563 IL16Q14005 1332 aa28.59■■■□□ 2.17
GRAMD4P4-201ENST00000613563 SCN4AP35499 1836 aa28.59■■■□□ 2.17
GRAMD4P4-201ENST00000613563 COL4A5P29400 1685 aa28.58■■■□□ 2.17
GRAMD4P4-201ENST00000613563 EIF6P56537 245 aaKnown RBP28.58■■■□□ 2.17
GRAMD4P4-201ENST00000613563 TAF1P21675 1872 aa28.57■■■□□ 2.16
GRAMD4P4-201ENST00000613563 IRS4O14654 1257 aaPredicted RBP28.57■■■□□ 2.16
GRAMD4P4-201ENST00000613563 TWISTNBQ3B726 338 aaPredicted RBP28.57■■■□□ 2.16
GRAMD4P4-201ENST00000613563 DNAJC5GQ8N7S2 189 aa28.57■■■□□ 2.16
GRAMD4P4-201ENST00000613563 STK31Q9BXU1 1019 aa28.57■■■□□ 2.16
GRAMD4P4-201ENST00000613563 PPIP5K2O43314 1243 aa28.56■■■□□ 2.16
GRAMD4P4-201ENST00000613563 POTEIP0CG38 1075 aa28.56■■■□□ 2.16
GRAMD4P4-201ENST00000613563 POTEJP0CG39 1038 aa28.56■■■□□ 2.16
GRAMD4P4-201ENST00000613563 FAM9BQ8IZU0 186 aa28.56■■■□□ 2.16
GRAMD4P4-201ENST00000613563 TAF1DQ9H5J8 278 aaPredicted RBP28.56■■■□□ 2.16
GRAMD4P4-201ENST00000613563 SF3B3Q15393 1217 aaKnown RBP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms