RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 F6X3S4 739 aa16.83■□□□□ 0.28
MDC1-209ENST00000613547 H0YIN7 160 aa16.83■□□□□ 0.28
MDC1-209ENST00000613547 HSP90B1P14625 803 aaKnown RBP16.83■□□□□ 0.28
MDC1-209ENST00000613547 ERFEQ4G0M1 354 aa16.83■□□□□ 0.28
MDC1-209ENST00000613547 SLC4A10Q6U841 1118 aa16.83■□□□□ 0.28
MDC1-209ENST00000613547 NUTM1Q86Y26 1132 aa16.83■□□□□ 0.28
MDC1-209ENST00000613547 CCDC24Q8N4L8 307 aa16.83■□□□□ 0.28
MDC1-209ENST00000613547 NLGN2Q8NFZ4 835 aa16.83■□□□□ 0.28
MDC1-209ENST00000613547 NRXN2Q9P2S2 1712 aa16.83■□□□□ 0.28
MDC1-209ENST00000613547 ARFGEF2Q9Y6D5 1785 aa16.83■□□□□ 0.28
MDC1-209ENST00000613547 NOB1Q9ULX3 412 aaKnown RBP16.82■□□□□ 0.28
MDC1-209ENST00000613547 CACNA1FO60840 1977 aa16.82■□□□□ 0.28
MDC1-209ENST00000613547 PXDNLA1KZ92 1463 aa16.81■□□□□ 0.28
MDC1-209ENST00000613547 RIC1Q4ADV7 1423 aa16.81■□□□□ 0.28
MDC1-209ENST00000613547 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
MDC1-209ENST00000613547 NEURL1BA8MQ27 555 aa16.81■□□□□ 0.28
MDC1-209ENST00000613547 BCAR3O75815 825 aa16.81■□□□□ 0.28
MDC1-209ENST00000613547 IGKV5-2P06315 115 aa16.81■□□□□ 0.28
MDC1-209ENST00000613547 CWF19L2Q2TBE0 894 aaKnown RBP16.81■□□□□ 0.28
MDC1-209ENST00000613547 C2CD5Q86YS7 1000 aa16.81■□□□□ 0.28
MDC1-209ENST00000613547 ZBTB38Q8NAP3 1195 aaPredicted RBP16.81■□□□□ 0.28
MDC1-209ENST00000613547 ARHGAP45Q92619 1136 aa16.81■□□□□ 0.28
MDC1-209ENST00000613547 FRAT1Q92837 279 aaPredicted RBP16.81■□□□□ 0.28
MDC1-209ENST00000613547 SRCIN1Q9C0H9 1055 aa16.81■□□□□ 0.28
MDC1-209ENST00000613547 ANKRD36CQ5JPF3 1778 aa16.81■□□□□ 0.28
MDC1-209ENST00000613547 ABCC12Q96J65 1359 aa16.8■□□□□ 0.28
MDC1-209ENST00000613547 PCCAP05165 728 aaPredicted RBP16.8■□□□□ 0.28
MDC1-209ENST00000613547 DPEP1P16444 411 aa16.8■□□□□ 0.28
MDC1-209ENST00000613547 BEND3Q5T5X7 828 aa16.8■□□□□ 0.28
MDC1-209ENST00000613547 FAM89AQ96GI7 184 aa16.8■□□□□ 0.28
MDC1-209ENST00000613547 NLRP3Q96P20 1036 aa16.8■□□□□ 0.28
MDC1-209ENST00000613547 RCAN3Q9UKA8 241 aa16.8■□□□□ 0.28
MDC1-209ENST00000613547 ALDH1L1O75891 902 aa16.79■□□□□ 0.28
MDC1-209ENST00000613547 CHRNA5P30532 468 aa16.79■□□□□ 0.28
MDC1-209ENST00000613547 GCKRQ14397 625 aa16.79■□□□□ 0.28
MDC1-209ENST00000613547 SLC10A5Q5PT55 438 aa16.79■□□□□ 0.28
MDC1-209ENST00000613547 PIM2Q9P1W9 311 aa16.79■□□□□ 0.28
MDC1-209ENST00000613547 AFDNP55196 1824 aaKnown RBP16.79■□□□□ 0.28
MDC1-209ENST00000613547 IRS4O14654 1257 aaPredicted RBP16.78■□□□□ 0.28
MDC1-209ENST00000613547 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
MDC1-209ENST00000613547 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
MDC1-209ENST00000613547 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
MDC1-209ENST00000613547 KIF13BQ9NQT8 1826 aa16.77■□□□□ 0.28
MDC1-209ENST00000613547 KLRG2A4D1S0 409 aaPredicted RBP16.77■□□□□ 0.28
MDC1-209ENST00000613547 HCLS1P14317 486 aaPredicted RBP16.77■□□□□ 0.28
MDC1-209ENST00000613547 NPR1P16066 1061 aa16.77■□□□□ 0.28
MDC1-209ENST00000613547 CCT4P50991 539 aaKnown RBP16.77■□□□□ 0.28
MDC1-209ENST00000613547 ATF7IPQ6VMQ6 1270 aa16.77■□□□□ 0.28
MDC1-209ENST00000613547 RPGRQ92834 1020 aaKnown RBP16.77■□□□□ 0.28
MDC1-209ENST00000613547 ZNF622Q969S3 477 aaKnown RBP eCLIP16.77■□□□□ 0.282e-11■□□□□ 11.1
MDC1-209ENST00000613547 MASTLQ96GX5 879 aa16.77■□□□□ 0.28
MDC1-209ENST00000613547 CDHR2Q9BYE9 1310 aa16.76■□□□□ 0.27
MDC1-209ENST00000613547 SRGNP10124 158 aa16.76■□□□□ 0.27
MDC1-209ENST00000613547 GPR162Q16538 588 aa16.76■□□□□ 0.27
MDC1-209ENST00000613547 CRY2Q49AN0 593 aa16.76■□□□□ 0.27
MDC1-209ENST00000613547 DALRD3Q5D0E6 543 aaKnown RBP16.76■□□□□ 0.27
MDC1-209ENST00000613547 STYK1Q6J9G0 422 aa16.76■□□□□ 0.27
MDC1-209ENST00000613547 UBE3BQ7Z3V4 1068 aa16.76■□□□□ 0.27
MDC1-209ENST00000613547 C9orf78Q9NZ63 289 aaPredicted RBP16.76■□□□□ 0.27
MDC1-209ENST00000613547 H7C1W4 665 aa16.75■□□□□ 0.27
MDC1-209ENST00000613547 GRM8O00222 908 aa16.75■□□□□ 0.27
MDC1-209ENST00000613547 SYNE4Q8N205 404 aa16.75■□□□□ 0.27
MDC1-209ENST00000613547 TTLL6Q8N841 843 aa16.75■□□□□ 0.27
MDC1-209ENST00000613547 CNKSR1Q969H4 720 aa16.75■□□□□ 0.27
MDC1-209ENST00000613547 BCS1LQ9Y276 419 aa16.75■□□□□ 0.27
MDC1-209ENST00000613547 PDE8AO60658 829 aa16.74■□□□□ 0.27
MDC1-209ENST00000613547 MS4A1P11836 297 aa16.74■□□□□ 0.27
MDC1-209ENST00000613547 TRIM27P14373 513 aa16.74■□□□□ 0.27
MDC1-209ENST00000613547 KCNA3P22001 575 aa16.74■□□□□ 0.27
MDC1-209ENST00000613547 ALDH1B1P30837 517 aa16.74■□□□□ 0.27
MDC1-209ENST00000613547 FTSJ3Q8IY81 847 aaKnown RBP16.74■□□□□ 0.27
MDC1-209ENST00000613547 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
MDC1-209ENST00000613547 RBM17Q96I25 401 aaKnown RBP16.74■□□□□ 0.27
MDC1-209ENST00000613547 JARID2Q92833 1246 aaPredicted RBP16.73■□□□□ 0.27
MDC1-209ENST00000613547 WWC3Q9ULE0 1092 aa16.73■□□□□ 0.27
MDC1-209ENST00000613547 ABCC4O15439 1325 aa16.72■□□□□ 0.27
MDC1-209ENST00000613547 GRIN3BO60391 1043 aa16.72■□□□□ 0.27
MDC1-209ENST00000613547 HOXA10P31260 410 aaPredicted RBP16.72■□□□□ 0.27
MDC1-209ENST00000613547 SF3B3Q15393 1217 aaKnown RBP16.72■□□□□ 0.27
MDC1-209ENST00000613547 CCDC152Q4G0S7 254 aa16.72■□□□□ 0.27
MDC1-209ENST00000613547 DDX46Q7L014 1031 aaKnown RBP16.72■□□□□ 0.27
MDC1-209ENST00000613547 CLUAP1Q96AJ1 413 aa16.72■□□□□ 0.27
MDC1-209ENST00000613547 CRAMP1Q96RY5 1269 aa16.72■□□□□ 0.27
MDC1-209ENST00000613547 ANKRD31Q8N7Z5 1873 aa16.71■□□□□ 0.27
MDC1-209ENST00000613547 CTSWP56202 376 aa16.71■□□□□ 0.27
MDC1-209ENST00000613547 INTS3Q68E01 1043 aaKnown RBP16.71■□□□□ 0.27
MDC1-209ENST00000613547 C3orf67Q6ZVT6 689 aa16.71■□□□□ 0.27
MDC1-209ENST00000613547 DZIP1LQ8IYY4 767 aaKnown RBP16.71■□□□□ 0.27
MDC1-209ENST00000613547 HDAC5Q9UQL6 1122 aa16.71■□□□□ 0.27
MDC1-209ENST00000613547 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
MDC1-209ENST00000613547 TNRC6CQ9HCJ0 1690 aaKnown RBP16.7■□□□□ 0.26
MDC1-209ENST00000613547 PRPF40BQ6NWY9 871 aaKnown RBP16.7■□□□□ 0.26
MDC1-209ENST00000613547 PLA2G12BQ9BX93 195 aa16.7■□□□□ 0.26
MDC1-209ENST00000613547 TMX4Q9H1E5 349 aaPredicted RBP16.7■□□□□ 0.26
MDC1-209ENST00000613547 N4BP2Q86UW6 1770 aaPredicted RBP16.69■□□□□ 0.26
MDC1-209ENST00000613547 SOGA3Q5TF21 947 aa16.69■□□□□ 0.26
MDC1-209ENST00000613547 UTYO14607 1347 aa16.69■□□□□ 0.26
MDC1-209ENST00000613547 NBPF7P0C2Y1 421 aaPredicted RBP16.68■□□□□ 0.26
MDC1-209ENST00000613547 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
MDC1-209ENST00000613547 YBX3P16989 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms