RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 TM4SF1P30408 202 aa11.81□□□□□ -0.52
ATF3-210ENST00000613104 TRIM28Q13263 835 aaKnown RBP11.81□□□□□ -0.52
ATF3-210ENST00000613104 NFIXQ14938 502 aa11.81□□□□□ -0.52
ATF3-210ENST00000613104 BEND3Q5T5X7 828 aa11.81□□□□□ -0.52
ATF3-210ENST00000613104 MYD88Q99836 296 aa11.81□□□□□ -0.52
ATF3-210ENST00000613104 TNNQ9UQP3 1299 aa11.81□□□□□ -0.52
ATF3-210ENST00000613104 NRXN2Q9P2S2 1712 aa11.8□□□□□ -0.52
ATF3-210ENST00000613104 IGKV5-2P06315 115 aa11.8□□□□□ -0.52
ATF3-210ENST00000613104 RRP1P56182 461 aaKnown RBP11.8□□□□□ -0.52
ATF3-210ENST00000613104 PARP10Q53GL7 1025 aa11.8□□□□□ -0.52
ATF3-210ENST00000613104 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.8□□□□□ -0.52
ATF3-210ENST00000613104 LINS1Q8NG48 757 aa11.8□□□□□ -0.52
ATF3-210ENST00000613104 MTFR1LQ9H019 292 aa11.8□□□□□ -0.52
ATF3-210ENST00000613104 NIP7Q9Y221 180 aaKnown RBP eCLIP11.8□□□□□ -0.52
ATF3-210ENST00000613104 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
ATF3-210ENST00000613104 NEURL1BA8MQ27 555 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 PLIN1O60240 522 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 MS4A1P11836 297 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 GPTP24298 496 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 NEXNQ0ZGT2 675 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 INTS3Q68E01 1043 aaKnown RBP11.79□□□□□ -0.52
ATF3-210ENST00000613104 NLRP10Q86W26 655 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
ATF3-210ENST00000613104 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
ATF3-210ENST00000613104 POLRMTO00411 1230 aaKnown RBP11.78□□□□□ -0.52
ATF3-210ENST00000613104 ZBTB7AO95365 584 aa11.78□□□□□ -0.52
ATF3-210ENST00000613104 RLBP1P12271 317 aa11.78□□□□□ -0.52
ATF3-210ENST00000613104 CCT4P50991 539 aaKnown RBP11.78□□□□□ -0.52
ATF3-210ENST00000613104 DDR1Q08345 913 aa11.78□□□□□ -0.52
ATF3-210ENST00000613104 PDE3AQ14432 1141 aa11.78□□□□□ -0.52
ATF3-210ENST00000613104 CWF19L2Q2TBE0 894 aaKnown RBP11.78□□□□□ -0.52
ATF3-210ENST00000613104 SUSD4Q5VX71 490 aa11.78□□□□□ -0.52
ATF3-210ENST00000613104 SLC4A10Q6U841 1118 aa11.78□□□□□ -0.52
ATF3-210ENST00000613104 BICDL1Q6ZP65 573 aa11.78□□□□□ -0.52
ATF3-210ENST00000613104 CLUAP1Q96AJ1 413 aa11.78□□□□□ -0.52
ATF3-210ENST00000613104 SETDB2Q96T68 719 aa11.78□□□□□ -0.52
ATF3-210ENST00000613104 SRCIN1Q9C0H9 1055 aa11.78□□□□□ -0.52
ATF3-210ENST00000613104 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
ATF3-210ENST00000613104 MMP10P09238 476 aa11.77□□□□□ -0.53
ATF3-210ENST00000613104 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
ATF3-210ENST00000613104 TMEM57Q8N5G2 664 aa11.77□□□□□ -0.53
ATF3-210ENST00000613104 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
ATF3-210ENST00000613104 CWC25Q9NXE8 425 aaPredicted RBP11.77□□□□□ -0.53
ATF3-210ENST00000613104 NTSR2O95665 410 aa11.76□□□□□ -0.53
ATF3-210ENST00000613104 SERPINB2P05120 415 aa11.76□□□□□ -0.53
ATF3-210ENST00000613104 GCKRQ14397 625 aa11.76□□□□□ -0.53
ATF3-210ENST00000613104 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
ATF3-210ENST00000613104 UTP14AQ9BVJ6 771 aaKnown RBP11.76□□□□□ -0.53
ATF3-210ENST00000613104 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
ATF3-210ENST00000613104 LAMB2P55268 1798 aa11.75□□□□□ -0.53
ATF3-210ENST00000613104 H7C1W4 665 aa11.75□□□□□ -0.53
ATF3-210ENST00000613104 PCCAP05165 728 aaPredicted RBP11.75□□□□□ -0.53
ATF3-210ENST00000613104 PTGER2P43116 358 aa11.75□□□□□ -0.53
ATF3-210ENST00000613104 CASP7P55210 303 aa11.75□□□□□ -0.53
ATF3-210ENST00000613104 C20orf194Q5TEA3 1177 aa11.75□□□□□ -0.53
ATF3-210ENST00000613104 ZBTB38Q8NAP3 1195 aaPredicted RBP11.75□□□□□ -0.53
ATF3-210ENST00000613104 PANK1Q8TE04 598 aa11.75□□□□□ -0.53
ATF3-210ENST00000613104 NYXQ9GZU5 481 aa11.75□□□□□ -0.53
ATF3-210ENST00000613104 UTYO14607 1347 aa11.75□□□□□ -0.53
ATF3-210ENST00000613104 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 POLD1P28340 1107 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 MVPQ14764 893 aaKnown RBP11.74□□□□□ -0.53
ATF3-210ENST00000613104 SLC10A5Q5PT55 438 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 PRR5LQ6MZQ0 368 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 TPTE2Q6XPS3 522 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 NBPF5PQ86XG9 351 aaPredicted RBP11.74□□□□□ -0.53
ATF3-210ENST00000613104 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 USP44Q9H0E7 712 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 SPON1Q9HCB6 807 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 CDHR2Q9BYE9 1310 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 RIC1Q4ADV7 1423 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
ATF3-210ENST00000613104 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
ATF3-210ENST00000613104 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
ATF3-210ENST00000613104 GRM8O00222 908 aa11.73□□□□□ -0.53
ATF3-210ENST00000613104 CNBD1Q8NA66 436 aa11.73□□□□□ -0.53
ATF3-210ENST00000613104 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
ATF3-210ENST00000613104 COG6Q9Y2V7 657 aa11.73□□□□□ -0.53
ATF3-210ENST00000613104 C10orf71Q711Q0 1435 aa11.72□□□□□ -0.53
ATF3-210ENST00000613104 ABCC12Q96J65 1359 aa11.72□□□□□ -0.53
ATF3-210ENST00000613104 ZBTB7BO15156 539 aaPredicted RBP11.72□□□□□ -0.53
ATF3-210ENST00000613104 ERFEQ4G0M1 354 aa11.72□□□□□ -0.53
ATF3-210ENST00000613104 NUTM1Q86Y26 1132 aa11.72□□□□□ -0.53
ATF3-210ENST00000613104 ITPRIPQ8IWB1 547 aa11.72□□□□□ -0.53
ATF3-210ENST00000613104 SYNE4Q8N205 404 aa11.72□□□□□ -0.53
ATF3-210ENST00000613104 FAM89AQ96GI7 184 aa11.72□□□□□ -0.53
ATF3-210ENST00000613104 PLA2G12BQ9BX93 195 aa11.72□□□□□ -0.53
ATF3-210ENST00000613104 C9orf78Q9NZ63 289 aaPredicted RBP11.72□□□□□ -0.53
ATF3-210ENST00000613104 PPP1R1BQ9UD71 204 aaPredicted RBP11.72□□□□□ -0.53
ATF3-210ENST00000613104 MYH3P11055 1940 aa11.72□□□□□ -0.53
ATF3-210ENST00000613104 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.53
ATF3-210ENST00000613104 NBPF7P0C2Y1 421 aaPredicted RBP11.71□□□□□ -0.53
ATF3-210ENST00000613104 GTF2E1P29083 439 aaPredicted RBP11.71□□□□□ -0.53
ATF3-210ENST00000613104 ST5P78524 1137 aa11.71□□□□□ -0.53
ATF3-210ENST00000613104 UBE3BQ7Z3V4 1068 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms